MGE detailed information
MGE type: Mobilizable plasmid MGE length: 89518 bp
Accession: NZ_CP028380 Location: 1..89518 Organism: Escherichia coli O145 str. RM9872 Replicon: plasmid pRM9872-1
Accession: NZ_CP028380 Location: 1..89518 Organism: Escherichia coli O145 str. RM9872 Replicon: plasmid pRM9872-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3Y_RS27610 () | 78..730 | - | 653 | Protein_0 | IS3 family transposase IS629 | Transposase |
| I3Y_RS27620 () | 2205..3026 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| I3Y_RS27625 () | 3026..4132 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| I3Y_RS27630 () | 4226..5947 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| I3Y_RS27635 () | 6021..7019 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| I3Y_RS27640 () | 7072..7260 | + | 189 | Protein_5 | hypothetical protein | - |
| I3Y_RS27645 () | 7323..8861 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| I3Y_RS27650 () | 8911..9258 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3Y_RS27660 () | 9495..9860 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| I3Y_RS27665 () | 9860..11047 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3Y_RS27670 () | 11326..12878 | - | 1553 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS27675 () | 12898..13245 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS27680 () | 13242..13916 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS28575 () | 13847..14266 | + | 420 | WP_136139077.1 | DUF1449 family protein | - |
| I3Y_RS27695 () | 14314..14526 | - | 213 | Protein_14 | IS3 family transposase ISSfl10 | Transposase |
| I3Y_RS27700 () | 14588..14761 | + | 174 | Protein_15 | IS66 family transposase | - |
| I3Y_RS27705 () | 15204..19106 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| I3Y_RS27715 () | 19650..19862 | + | 213 | Protein_17 | IS3 family transposase ISSfl10 | Transposase |
| I3Y_RS27720 () | 19910..20323 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| I3Y_RS27730 () | 20322..21535 | + | 1214 | WP_162908518.1 | IS3 family transposase IS629 | Transposase |
| I3Y_RS27735 () | 21576..22063 | - | 488 | Protein_20 | IS3 family transposase ISSfl10 | Transposase |
| I3Y_RS27740 () | 22102..22422 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| I3Y_RS27745 () | 22643..25363 | - | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| I3Y_RS27750 () | 25375..25707 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| I3Y_RS27755 () | 25939..26274 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I3Y_RS27760 () | 26360..27208 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| I3Y_RS28720 () | 27453..27728 | + | 276 | WP_001431784.1 | hypothetical protein | - |
| I3Y_RS27770 () | 27787..28038 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| I3Y_RS27775 () | 28069..28314 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| I3Y_RS27780 () | 28314..29204 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| I3Y_RS27785 () | 29269..29535 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| I3Y_RS27790 () | 29628..30062 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| I3Y_RS28580 () | 30168..30788 | + | 621 | WP_162137195.1 | hypothetical protein | - |
| I3Y_RS27805 () | 30790..31290 | - | 501 | Protein_33 | antirestriction protein ArdA | - |
| I3Y_RS28725 () | 31752..32349 | - | 598 | Protein_34 | hypothetical protein | - |
| I3Y_RS27820 () | 32346..33065 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| I3Y_RS28730 () | 33062..33310 | - | 249 | Protein_36 | conjugation system SOS inhibitor PsiB | - |
| I3Y_RS28735 () | 33305..33544 | - | 240 | Protein_37 | hypothetical protein | - |
| I3Y_RS27830 () | 33589..34023 | - | 435 | WP_032315906.1 | DUF1380 family protein | - |
| I3Y_RS27835 () | 34035..34253 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| I3Y_RS27840 () | 34253..34936 | - | 684 | WP_000086167.1 | DNA methylase | - |
| I3Y_RS27845 () | 35012..35323 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| I3Y_RS27850 () | 35320..36222 | - | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| I3Y_RS27855 () | 36495..37454 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| I3Y_RS27860 () | 37454..37849 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| I3Y_RS27865 () | 37929..38696 | - | 768 | Protein_45 | IS3 family transposase | - |
| I3Y_RS27870 () | 38810..39199 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| I3Y_RS27875 () | 39243..41453 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| I3Y_RS27890 () | 43645..44622 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| I3Y_RS27895 () | 44785..45012 | + | 228 | WP_001341442.1 | transposase | - |
| I3Y_RS27900 () | 45066..45740 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS27905 () | 45737..46084 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS27910 () | 46104..47656 | + | 1553 | Protein_53 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS27915 () | 47690..48079 | + | 390 | Protein_54 | IS91 family transposase ISMno23 | Transposase |
| I3Y_RS27925 () | 48480..48845 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| I3Y_RS27930 () | 48845..50032 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3Y_RS27940 () | 50623..51638 | + | 1016 | Protein_57 | IS91 family transposase ISEc37 | Transposase |
| I3Y_RS27945 () | 52258..53767 | + | 1510 | Protein_58 | ISL3 family transposase | - |
| I3Y_RS27950 () | 53818..53932 | - | 115 | Protein_59 | IS3 family transposase | - |
| I3Y_RS27955 () | 54019..54405 | + | 387 | Protein_60 | IS66 family transposase ISEc23 | Transposase |
| I3Y_RS27960 () | 54476..55628 | + | 1153 | Protein_61 | IS3 family transposase | - |
| I3Y_RS27965 () | 55640..57140 | + | 1501 | Protein_62 | IS66 family transposase | - |
| I3Y_RS28740 () | 57207..57615 | - | 409 | Protein_63 | IS3 family transposase | - |
| I3Y_RS27975 () | 57622..57852 | + | 231 | WP_001443774.1 | transposase | - |
| I3Y_RS27980 () | 57967..67466 | + | 9500 | Protein_65 | Toxin B | VF |
| I3Y_RS27995 () | 68426..69457 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| I3Y_RS28010 () | 70166..70807 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| I3Y_RS28015 () | 70948..71613 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| I3Y_RS28025 () | 71880..72239 | + | 360 | Protein_69 | DUF1449 family protein | - |
| I3Y_RS28030 () | 72273..73825 | - | 1553 | Protein_70 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS28035 () | 73845..74192 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS28040 () | 74189..74863 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3Y_RS28045 () | 74917..75303 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| I3Y_RS28050 () | 75431..76291 | + | 861 | WP_000704534.1 | putative protein YcjY | VF |
| I3Y_RS28065 () | 77901..78446 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| I3Y_RS28070 () | 78608..79024 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I3Y_RS28075 () | 79021..79251 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I3Y_RS28095 () | 79811..80224 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| I3Y_RS28100 () | 80226..81008 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| I3Y_RS28105 () | 81181..81534 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| I3Y_RS28110 () | 81542..81733 | - | 192 | Protein_82 | lipid II-degrading bacteriocin | - |
| I3Y_RS28115 () | 81737..81880 | - | 144 | Protein_83 | transcriptional regulator | - |
| I3Y_RS28120 () | 81947..83386 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| I3Y_RS28125 () | 83390..85510 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| I3Y_RS28130 () | 85560..88556 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| I3Y_RS28135 () | 88558..89073 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|