MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 184480 bp
Accession: NZ_CP028325 Location: 845804..1030283 Organism: Helicobacter pylori strain FDAARGOS_298 Replicon: chromosome
Accession: NZ_CP028325 Location: 845804..1030283 Organism: Helicobacter pylori strain FDAARGOS_298 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP77_RS04120 () | 841407..841646 | - | 240 | WP_000461832.1 | DUF2443 domain-containing protein | - |
| CEP77_RS04125 () | 841689..842231 | - | 543 | WP_108169398.1 | purine-nucleoside phosphorylase | - |
| CEP77_RS04130 () | 842384..843751 | + | 1368 | WP_108169399.1 | chromosomal replication initiator protein DnaA | - |
| CEP77_RS04135 () | 843980..845419 | + | 1440 | WP_108169400.1 | competence protein | - |
| CEP77_RS04145 () | 845599..846351 | + | 753 | WP_108169401.1 | exodeoxyribonuclease III | - |
| CEP77_RS04150 () | 846348..846983 | - | 636 | WP_108169402.1 | outer membrane protein | - |
| CEP77_RS04155 () | 846987..847334 | - | 348 | WP_108169403.1 | hypothetical protein | - |
| CEP77_RS04160 () | 847416..849287 | + | 1872 | WP_108169404.1 | ATP-dependent DNA helicase RecG | - |
| CEP77_RS04165 () | 849331..850701 | + | 1371 | WP_108169405.1 | site-specific DNA-methyltransferase | - |
| CEP77_RS04170 () | 850679..851293 | + | 615 | WP_108169406.1 | site-specific DNA-methyltransferase | - |
| CEP77_RS04175 () | 851296..854205 | + | 2910 | WP_108169407.1 | type III restriction-modification system endonuclease | - |
| CEP77_RS04180 () | 854408..858169 | + | 3762 | WP_108169408.1 | class I SAM-dependent DNA methyltransferase | - |
| CEP77_RS04190 () | 858975..859412 | + | 438 | WP_108169409.1 | SocA family protein | - |
| CEP77_RS04195 () | 859402..860167 | + | 766 | Protein_784 | hypothetical protein | - |
| CEP77_RS04200 () | 860400..861587 | - | 1188 | WP_108169410.1 | transcription termination/antitermination protein NusA | - |
| CEP77_RS04205 () | 861689..862849 | - | 1161 | WP_108169411.1 | L-seryl-tRNA(Sec) selenium transferase | - |
| CEP77_RS04210 () | 863077..865668 | - | 2592 | WP_108169412.1 | TonB-dependent receptor | - |
| CEP77_RS04215 () | 865822..866148 | - | 327 | WP_108169413.1 | iron-regulated protein | - |
| CEP77_RS04220 () | 866132..866485 | - | 354 | WP_108169414.1 | FolB domain-containing protein | - |
| CEP77_RS04225 () | 866482..867270 | - | 789 | WP_108169415.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| CEP77_RS04230 () | 867250..868626 | + | 1377 | WP_108169416.1 | cytochrome c oxidase accessory protein CcoG | - |
| CEP77_RS04235 () | 868635..869834 | - | 1200 | WP_108169417.1 | saccharopine dehydrogenase family protein | - |
| CEP77_RS04240 () | 869920..871146 | + | 1227 | WP_108169418.1 | sodium/glutamate symporter | - |
| CEP77_RS04245 () | 871143..872177 | + | 1035 | WP_108169419.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | - |
| CEP77_RS04250 () | 872159..872875 | + | 717 | WP_108169420.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CEP77_RS04255 () | 872885..875251 | + | 2367 | WP_108169421.1 | heavy metal translocating P-type ATPase | - |
| CEP77_RS04260 () | 875248..875685 | - | 438 | WP_108169422.1 | CopD family copper resistance protein | - |
| CEP77_RS04265 () | 875867..877030 | + | 1164 | WP_162296900.1 | hypothetical protein | VF |
| CEP77_RS04270 () | 877093..878709 | - | 1617 | Protein_799 | AlwI family type II restriction endonuclease | - |
| CEP77_RS04275 () | 878716..879615 | - | 900 | WP_108169424.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CEP77_RS04280 () | 879612..880613 | - | 1002 | WP_108169425.1 | DNA adenine methylase | - |
| CEP77_RS04285 () | 880670..881737 | - | 1068 | WP_108169426.1 | LptF/LptG family permease | - |
| CEP77_RS04290 () | 881792..882352 | - | 561 | WP_108169427.1 | aminoacyl-tRNA hydrolase | - |
| CEP77_RS04295 () | 882362..882898 | - | 537 | WP_000889333.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| CEP77_RS04300 () | 882953..883903 | - | 951 | WP_108169428.1 | transaldolase | - |
| CEP77_RS04305 () | 883907..885250 | - | 1344 | WP_108169429.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| CEP77_RS04310 () | 885254..885865 | - | 612 | WP_108169430.1 | histidine kinase | - |
| CEP77_RS04315 () | 885877..886146 | - | 270 | WP_000569296.1 | NifU family protein | - |
| CEP77_RS04320 () | 886287..887888 | + | 1602 | WP_108169431.1 | inorganic phosphate transporter | - |
| CEP77_RS04325 () | 887991..889328 | + | 1338 | WP_108169432.1 | hemolysin family protein | - |
| CEP77_RS04330 () | 889344..890876 | + | 1533 | WP_108169433.1 | TolC family protein | - |
| CEP77_RS04335 () | 890888..891877 | + | 990 | WP_108169434.1 | efflux RND transporter periplasmic adaptor subunit | - |
| CEP77_RS04340 () | 891889..892986 | + | 1098 | WP_108169435.1 | ABC transporter permease | - |
| CEP77_RS04345 () | 892983..894113 | + | 1131 | WP_108169436.1 | ABC transporter permease | - |
| CEP77_RS04350 () | 894100..894672 | + | 573 | WP_108169437.1 | YigZ family protein | - |
| CEP77_RS04355 () | 894683..895129 | + | 447 | WP_000506456.1 | protoporphyrinogen oxidase HemJ | - |
| CEP77_RS04360 () | 895156..895887 | + | 732 | WP_108169438.1 | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | - |
| CEP77_RS04365 () | 895897..896157 | + | 261 | WP_050844145.1 | exodeoxyribonuclease VII small subunit | - |
| CEP77_RS04370 () | 896161..896958 | + | 798 | WP_108169439.1 | carbon-nitrogen hydrolase family protein | - |
| CEP77_RS04375 () | 896959..898206 | + | 1248 | WP_108169440.1 | serine--tRNA ligase | - |
| CEP77_RS04380 () | 898216..900750 | + | 2535 | WP_108169441.1 | anaphase-promoting protein | - |
| CEP77_RS04385 () | 900750..902795 | + | 2046 | WP_162296836.1 | DNA helicase UvrD | - |
| CEP77_RS04390 () | 902792..903448 | + | 657 | WP_108169443.1 | hypothetical protein | VF |
| CEP77_RS04395 () | 903458..904021 | + | 564 | WP_000780122.1 | UbiX family flavin prenyltransferase | - |
| CEP77_RS04400 () | 904021..904494 | + | 474 | WP_108169444.1 | Phosphopantetheine adenylyltransferase | VF |
| CEP77_RS04405 () | 904496..905071 | + | 576 | WP_108169445.1 | dTMP kinase | - |
| CEP77_RS04410 () | 905059..905634 | + | 576 | WP_108169446.1 | ComF family protein | - |
| CEP77_RS04415 () | 905667..907706 | + | 2040 | WP_108169963.1 | N-6 DNA methylase | - |
| CEP77_RS04420 () | 907703..908896 | + | 1194 | WP_108169447.1 | restriction endonuclease subunit S | - |
| CEP77_RS04425 () | 908962..911637 | + | 2676 | WP_108169448.1 | DNA polymerase I | - |
| CEP77_RS04430 () | 911752..912498 | + | 747 | WP_108169449.1 | hypothetical protein | VF |
| CEP77_RS04435 () | 912546..913568 | + | 1023 | WP_108169450.1 | branched-chain-amino-acid transaminase | - |
| CEP77_RS04440 () | 913573..914268 | - | 696 | WP_108169451.1 | outer membrane protein | - |
| CEP77_RS04445 () | 914402..915535 | + | 1134 | WP_108169452.1 | ABC transporter permease | - |
| CEP77_RS04450 () | 915535..916320 | + | 786 | WP_101025040.1 | Arginine transport ATP-binding protein ArtM | VF |
| CEP77_RS04455 () | 916305..917120 | + | 816 | WP_108169453.1 | MCE family protein | - |
| CEP77_RS04460 () | 917123..917800 | + | 678 | WP_108169454.1 | hypothetical protein | - |
| CEP77_RS04465 () | 917819..918406 | + | 588 | WP_162296837.1 | META domain-containing protein | - |
| CEP77_RS04470 () | 918587..919639 | - | 1053 | WP_108169455.1 | cytochrome-c peroxidase | - |
| CEP77_RS04475 () | 919787..923422 | + | 3636 | WP_108169456.1 | DNA polymerase III subunit alpha | - |
| CEP77_RS04480 () | 923404..924192 | + | 789 | WP_108169457.1 | rRNA pseudouridine synthase | - |
| CEP77_RS04485 () | 924247..924561 | + | 315 | WP_000895147.1 | thioredoxin family protein | - |
| CEP77_RS04490 () | 924924..925556 | + | 633 | WP_000243401.1 | penicillin-binding protein activator LpoB | - |
| CEP77_RS04495 () | 925580..926107 | + | 528 | WP_000795968.1 | LPP20 family lipoprotein | - |
| CEP77_RS04500 () | 926115..926456 | + | 342 | WP_000824768.1 | hypothetical protein | - |
| CEP77_RS04505 () | 926466..927377 | + | 912 | WP_039088095.1 | LPP20 family lipoprotein | - |
| CEP77_RS04510 () | 927738..928427 | - | 690 | WP_108169459.1 | restriction endonuclease subunit S | - |
| CEP77_RS04515 () | 929254..931029 | + | 1776 | WP_108169460.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CEP77_RS08445 () | 931148..931288 | + | 141 | WP_157956328.1 | hypothetical protein | - |
| CEP77_RS04520 () | 932443..933510 | + | 1068 | WP_001120380.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| CEP77_RS04525 () | 933827..934630 | - | 804 | WP_108169461.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CEP77_RS04530 () | 934602..934853 | - | 252 | WP_000006537.1 | hypothetical protein | - |
| CEP77_RS04535 () | 934985..935665 | - | 681 | WP_108169462.1 | CAAX protease | - |
| CEP77_RS04540 () | 935886..936915 | + | 1030 | Protein_854 | hypothetical protein | - |
| CEP77_RS04545 () | 936920..937549 | - | 630 | WP_108169463.1 | hypothetical protein | - |
| CEP77_RS04550 () | 937566..939614 | - | 2049 | WP_108169464.1 | hypothetical protein | - |
| CEP77_RS04555 () | 939614..940666 | - | 1053 | WP_108169465.1 | DUF1738 domain-containing protein | - |
| CEP77_RS08450 () | 940667..940831 | - | 165 | WP_000189763.1 | hypothetical protein | - |
| CEP77_RS04565 () | 941469..942137 | + | 669 | WP_108169466.1 | ParA family protein | - |
| CEP77_RS04570 () | 942184..942561 | + | 378 | WP_108169467.1 | hypothetical protein | - |
| CEP77_RS04575 () | 942539..943204 | + | 666 | WP_108169468.1 | hypothetical protein | - |
| CEP77_RS04580 () | 943277..944068 | - | 792 | WP_108169469.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CEP77_RS04585 () | 944038..944508 | - | 471 | WP_000965795.1 | hypothetical protein | - |
| CEP77_RS04590 () | 944563..946624 | - | 2062 | Protein_864 | type IA DNA topoisomerase | - |
| CEP77_RS04595 () | 946637..947038 | - | 402 | WP_000420189.1 | hypothetical protein | - |
| CEP77_RS04600 () | 947089..947340 | - | 252 | WP_108169470.1 | hypothetical protein | - |
| CEP77_RS04605 () | 947337..947546 | - | 210 | WP_000462384.1 | hypothetical protein | - |
| CEP77_RS04610 () | 947666..956179 | - | 8514 | WP_108169471.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| CEP77_RS04615 () | 956334..957371 | + | 1038 | WP_108169472.1 | hypothetical protein | - |
| CEP77_RS04620 () | 957372..958766 | + | 1395 | Protein_870 | hypothetical protein | - |
| CEP77_RS04625 () | 958786..959811 | + | 1026 | Protein_871 | competence protein | - |
| CEP77_RS04635 () | 959899..960345 | - | 447 | WP_162296838.1 | IS200-IS605 family transposase IS605 | Transposase |
| CEP77_RS04640 () | 960397..961680 | + | 1284 | WP_108169473.1 | IS200-IS605 family transposase IS605 | Transposase |
| CEP77_RS04645 () | 961697..962827 | + | 1131 | Protein_874 | Conjugal transfer protein TraG | VF |
| CEP77_RS04660 () | 963087..963692 | + | 606 | Protein_875 | Protein VirD4 | VF |
| CEP77_RS04665 () | 963966..964247 | - | 282 | WP_000921939.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CEP77_RS04670 () | 964240..964554 | - | 315 | WP_108169476.1 | hypothetical protein | Antitoxin Detail |
| CEP77_RS04675 () | 964858..966771 | + | 1914 | WP_108169477.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CEP77_RS04680 () | 966796..967980 | - | 1185 | WP_108169478.1 | hypothetical protein | - |
| CEP77_RS04685 () | 968012..968296 | - | 285 | WP_000394639.1 | hypothetical protein ; Integrase | Integrase |
| CEP77_RS04690 () | 968378..969034 | - | 657 | WP_108169479.1 | ParA family protein | - |
| CEP77_RS04695 () | 969301..972999 | - | 3699 | Protein_882 | hypothetical protein | VF |
| CEP77_RS04700 () | 973021..973595 | - | 575 | Protein_883 | hypothetical protein | VF |
| CEP77_RS04705 () | 973595..973831 | - | 237 | WP_001168532.1 | hypothetical protein | - |
| CEP77_RS04710 () | 973843..974106 | - | 264 | WP_001177716.1 | hypothetical protein | - |
| CEP77_RS04715 () | 974118..974402 | - | 285 | WP_064432016.1 | TrbC/VirB2 family protein | - |
| CEP77_RS04720 () | 974399..974878 | - | 480 | WP_108169480.1 | hypothetical protein | - |
| CEP77_RS04725 () | 974871..975086 | - | 216 | WP_108169481.1 | hypothetical protein | - |
| CEP77_RS04730 () | 975089..975877 | - | 789 | WP_172953003.1 | integrase | - |
| CEP77_RS04735 () | 975855..976496 | - | 642 | WP_108169483.1 | restriction endonuclease subunit S | - |
| CEP77_RS04740 () | 976484..977260 | - | 777 | WP_108169484.1 | Abi family protein | - |
| CEP77_RS04745 () | 977347..979812 | - | 2466 | WP_108169485.1 | type I restriction-modification system subunit M | - |
| CEP77_RS04750 () | 979882..982857 | + | 2976 | WP_162296902.1 | type I restriction endonuclease subunit R | - |
| CEP77_RS04755 () | 982857..983564 | + | 708 | WP_108169487.1 | M48 family metallopeptidase | - |
| CEP77_RS04760 () | 983663..986189 | - | 2527 | Protein_895 | TonB-dependent receptor family protein | - |
| CEP77_RS04765 () | 986537..987505 | - | 969 | WP_108169488.1 | arginase | - |
| CEP77_RS04770 () | 987707..988849 | + | 1143 | WP_108169489.1 | alanine dehydrogenase | - |
| CEP77_RS04775 () | 988973..990663 | + | 1691 | Protein_898 | DUF262 domain-containing protein | - |
| CEP77_RS04780 () | 990674..991402 | - | 729 | WP_108169490.1 | hypothetical protein | VF |
| CEP77_RS04785 () | 991588..992442 | + | 855 | WP_108169966.1 | NAD(+)/NADH kinase | - |
| CEP77_RS04790 () | 992457..994031 | + | 1575 | WP_108169491.1 | DNA recombination protein RecN | - |
| CEP77_RS04795 () | 994028..995335 | + | 1308 | WP_108169492.1 | NFACT family protein | - |
| CEP77_RS04800 () | 995354..995650 | + | 297 | WP_000539103.1 | hypothetical protein | - |
| CEP77_RS04805 () | 995788..996765 | + | 978 | WP_108169493.1 | Putative beta-lactamase HcpC | VF |
| CEP77_RS04810 () | 996804..997667 | - | 864 | WP_108169494.1 | 3'-5' exonuclease | - |
| CEP77_RS04815 () | 997645..998298 | - | 654 | WP_108169495.1 | Ribulose-phosphate 3-epimerase | VF |
| CEP77_RS04820 () | 998369..999241 | + | 873 | WP_108169496.1 | class 1 fructose-bisphosphatase | - |
| CEP77_RS04825 () | 999241..999444 | + | 204 | WP_025276491.1 | hypothetical protein | - |
| CEP77_RS04830 () | 999612..1000469 | - | 858 | WP_108169497.1 | cytochrome c1 | - |
| CEP77_RS04835 () | 1000466..1001704 | - | 1239 | WP_108169498.1 | cytochrome bc complex cytochrome b subunit | - |
| CEP77_RS04840 () | 1001715..1002218 | - | 504 | WP_000763638.1 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| CEP77_RS04845 () | 1002343..1005342 | - | 3000 | WP_108169499.1 | transcription-repair coupling factor | - |
| CEP77_RS04850 () | 1005346..1005756 | - | 411 | WP_000963936.1 | polymer-forming cytoskeletal protein | - |
| CEP77_RS04855 () | 1005675..1006610 | - | 936 | WP_108169500.1 | Murein DD-endopeptidase MepM | VF |
| CEP77_RS04860 () | 1006619..1007545 | - | 927 | WP_108169501.1 | M23 family metallopeptidase | - |
| CEP77_RS04865 () | 1007545..1008729 | - | 1185 | WP_108169502.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| CEP77_RS04870 () | 1008719..1009231 | - | 513 | WP_108169503.1 | hypothetical protein | - |
| CEP77_RS04875 () | 1009228..1011648 | - | 2421 | WP_108169504.1 | leucine--tRNA ligase | - |
| CEP77_RS04880 () | 1011659..1011997 | - | 339 | WP_000383778.1 | hypothetical protein | - |
| CEP77_RS04885 () | 1012007..1012978 | - | 972 | WP_108169505.1 | protein translocase subunit SecF | - |
| CEP77_RS04890 () | 1012987..1014564 | - | 1578 | WP_108169506.1 | protein translocase subunit SecD | - |
| CEP77_RS04895 () | 1014561..1014944 | - | 384 | WP_097552037.1 | preprotein translocase subunit YajC | - |
| CEP77_RS04900 () | 1014992..1016308 | - | 1317 | WP_108169507.1 | sodium/proton antiporter NhaA | - |
| CEP77_RS04905 () | 1016332..1019199 | - | 2868 | WP_108169508.1 | RecB-like helicase | - |
| CEP77_RS04910 () | 1019452..1020246 | + | 795 | WP_000258276.1 | 30S ribosomal protein S2 | - |
| CEP77_RS04915 () | 1020246..1021313 | + | 1068 | WP_108169509.1 | elongation factor Ts | - |
| CEP77_RS04920 () | 1021756..1023603 | - | 1848 | WP_108169510.1 | penicillin-binding protein 2 | - |
| CEP77_RS04925 () | 1023610..1023735 | - | 126 | WP_108169511.1 | transcriptional regulator | - |
| CEP77_RS04930 () | 1023759..1024088 | - | 330 | WP_001147916.1 | Flagellar hook-basal body complex protein FliE | VF |
| CEP77_RS04935 () | 1024215..1024700 | - | 486 | WP_000480077.1 | Flagellar basal-body rod protein FlgC | VF |
| CEP77_RS04940 () | 1024713..1025169 | - | 457 | Protein_931 | Flagellar basal body rod protein FlgB | VF |
| CEP77_RS04945 () | 1025341..1026507 | + | 1167 | WP_108169512.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| CEP77_RS04950 () | 1026531..1027532 | - | 1002 | WP_108169513.1 | ABC transporter substrate-binding protein | - |
| CEP77_RS04955 () | 1027772..1028368 | + | 597 | WP_000961643.1 | peroxiredoxin | - |
| CEP77_RS04960 () | 1028515..1029330 | + | 816 | WP_108169967.1 | D-methionine-binding lipoprotein MetQ | VF |
| CEP77_RS04965 () | 1029817..1031583 | - | 1767 | WP_108169514.1 | penicillin-binding protein 2 | - |
| CEP77_RS04970 () | 1031564..1032007 | - | 444 | WP_108169515.1 | hypothetical protein | - |
| CEP77_RS04975 () | 1032020..1032646 | - | 627 | WP_108169516.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| CEP77_RS04980 () | 1032643..1033200 | - | 558 | WP_108169517.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| CEP77_RS04985 () | 1033200..1033793 | - | 594 | WP_108169518.1 | hypothetical protein | - |
| CEP77_RS04990 () | 1033768..1034262 | - | 495 | WP_108169519.1 | HAD family hydrolase | - |
| CEP77_RS04995 () | 1034259..1035203 | - | 945 | WP_108169520.1 | septal ring lytic transglycosylase RlpA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|