MGE detailed information
MGE type: Genomic_island MGE length: 11167 bp
Accession: NZ_CP028122 Location: 3607340..3618506 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Accession: NZ_CP028122 Location: 3607340..3618506 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3W_RS19970 () | 3603665..3604873 | - | 1209 | WP_001352528.1 | propionate kinase | - |
| I3W_RS19975 () | 3604899..3606230 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| I3W_RS19980 () | 3606252..3607241 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| I3W_RS19990 () | 3607340..3608278 | - | 939 | WP_096968140.1 | transcriptional regulator TdcA | - |
| I3W_RS28075 () | 3608592..3608810 | + | 219 | WP_211437598.1 | transcriptional activator TdcR | - |
| I3W_RS20000 () | 3609066..3609605 | + | 540 | WP_000675743.1 | hypothetical protein | - |
| I3W_RS20005 () | 3609627..3610814 | + | 1188 | WP_021542248.1 | YhaC family protein | - |
| I3W_RS20015 () | 3611330..3612475 | - | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| I3W_RS20020 () | 3612572..3613462 | - | 891 | WP_021542249.1 | 2-hydroxy-3-oxopropionate reductase | - |
| I3W_RS20025 () | 3613492..3614262 | - | 771 | WP_001559981.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| I3W_RS20030 () | 3614278..3615612 | - | 1335 | WP_000599648.1 | galactarate/glucarate/glycerate transporter GarP | - |
| I3W_RS20035 () | 3615987..3617558 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| I3W_RS20040 () | 3617707..3618042 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| I3W_RS20045 () | 3618042..3618506 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| I3W_RS20050 () | 3618561..3619370 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| I3W_RS20060 () | 3619619..3620899 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| I3W_RS20065 () | 3620922..3621395 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| I3W_RS20070 () | 3621406..3622185 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| I3W_RS20075 () | 3622175..3623053 | + | 879 | WP_001355782.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| I3W_RS20080 () | 3623071..3623505 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|