MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 80721 bp
Accession: NZ_CP028122 Location: 2801459..2882179 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Accession: NZ_CP028122 Location: 2801459..2882179 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3W_RS15865 () | 2796805..2798109 | + | 1305 | WP_001315775.1 | penicillin binding protein PBP4B | - |
| I3W_RS15870 () | 2798167..2799066 | - | 900 | WP_000084590.1 | porphyrinogen peroxidase | - |
| I3W_RS15875 () | 2799162..2799737 | - | 576 | WP_000838945.1 | RpoE-regulated lipoprotein | - |
| I3W_RS15880 () | 2799798..2800247 | - | 450 | WP_001300381.1 | DUF2919 domain-containing protein | - |
| I3W_RS15885 () | 2800234..2800659 | - | 426 | WP_000406000.1 | GNAT family acetyltransferase | - |
| I3W_RS15890 () | 2800873..2801742 | + | 870 | WP_000102886.1 | N-acetylmuramoyl-L-alanine amidase AmiA | - |
| I3W_RS15895 () | 2801746..2802645 | + | 900 | WP_000801367.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| I3W_RS15900 () | 2802651..2803703 | - | 1053 | WP_000753700.1 | HTH-type transcriptional regulator EutR | - |
| I3W_RS15905 () | 2803749..2804249 | - | 501 | WP_000606257.1 | ethanolamine utilization microcompartment protein EutK | - |
| I3W_RS15910 () | 2804262..2804921 | - | 660 | WP_001111038.1 | ethanolamine utilization microcompartment protein EutL | - |
| I3W_RS15915 () | 2804931..2805818 | - | 888 | WP_000372364.1 | ethanolamine ammonia-lyase subunit beta | - |
| I3W_RS15920 () | 2805839..2807200 | - | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
| I3W_RS15925 () | 2807389..2808597 | + | 1209 | WP_108942431.1 | Prophage integrase IntS ; Integrase | Integrase |
| I3W_RS15930 () | 2809261..2809776 | - | 516 | WP_000250467.1 | type II toxin-antitoxin system YafO family toxin | - |
| I3W_RS15935 () | 2809763..2810110 | - | 348 | WP_108942433.1 | hypothetical protein | - |
| I3W_RS15940 () | 2810478..2810768 | + | 291 | WP_148726197.1 | helix-turn-helix domain-containing protein | - |
| I3W_RS15945 () | 2810765..2811340 | + | 576 | WP_042968432.1 | HNH endonuclease | - |
| I3W_RS15950 () | 2811430..2811729 | + | 300 | WP_108942435.1 | hypothetical protein | - |
| I3W_RS15955 () | 2811750..2812130 | + | 381 | WP_042968435.1 | hypothetical protein | - |
| I3W_RS15960 () | 2812271..2812555 | + | 285 | WP_047090073.1 | hypothetical protein | - |
| I3W_RS15965 () | 2812559..2812837 | + | 279 | WP_047090026.1 | hypothetical protein | - |
| I3W_RS15970 () | 2812852..2813172 | + | 321 | WP_108942437.1 | hypothetical protein | - |
| I3W_RS27920 () | 2813457..2813690 | + | 234 | WP_202601491.1 | hypothetical protein | - |
| I3W_RS15980 () | 2813680..2814282 | + | 603 | WP_108942441.1 | hypothetical protein | - |
| I3W_RS15985 () | 2814851..2815054 | + | 204 | WP_047090020.1 | hypothetical protein | - |
| I3W_RS15990 () | 2815196..2816005 | + | 810 | WP_108942442.1 | hypothetical protein | - |
| I3W_RS15995 () | 2816155..2817558 | - | 1404 | WP_096968127.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| I3W_RS16000 () | 2817555..2818781 | - | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| I3W_RS16005 () | 2818898..2820085 | - | 1188 | WP_096968128.1 | NAD-dependent methanol dehydrogenase | VF |
| I3W_RS16010 () | 2820075..2820911 | - | 837 | WP_000929729.1 | ethanolamine utilization protein EutJ | - |
| I3W_RS16015 () | 2820922..2822324 | - | 1403 | Protein_2714 | Aldehyde-alcohol dehydrogenase | VF |
| I3W_RS16020 () | 2822336..2822623 | - | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| I3W_RS16025 () | 2822730..2823023 | - | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| I3W_RS16030 () | 2823062..2824078 | - | 1017 | WP_000582978.1 | phosphate acetyltransferase | - |
| I3W_RS16035 () | 2824075..2824878 | - | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| I3W_RS16040 () | 2824875..2825576 | - | 702 | WP_000733906.1 | ethanolamine utilization acetate kinase EutQ | - |
| I3W_RS16045 () | 2825551..2826030 | - | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| I3W_RS16050 () | 2826043..2826378 | - | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| I3W_RS16060 () | 2826671..2828950 | - | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| I3W_RS16065 () | 2829239..2830189 | + | 951 | WP_108942444.1 | transaldolase | - |
| I3W_RS16070 () | 2830209..2832212 | + | 2004 | WP_000087298.1 | transketolase | - |
| I3W_RS16075 () | 2832308..2833351 | - | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| I3W_RS16080 () | 2833477..2834052 | - | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| I3W_RS16085 () | 2834120..2836099 | - | 1980 | WP_001078881.1 | formate-dependent uric acid utilization protein AegA | - |
| I3W_RS16090 () | 2836305..2838005 | + | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| I3W_RS16095 () | 2838169..2841282 | + | 3114 | WP_096941800.1 | Multidrug resistance protein MdtB | VF |
| I3W_RS16105 () | 2841381..2841440 | - | 60 | WP_001386977.1 | protein YpfM | - |
| I3W_RS16110 () | 2841821..2842177 | + | 357 | WP_000258247.1 | ArsC family reductase | - |
| I3W_RS16115 () | 2842181..2843308 | + | 1128 | WP_001277809.1 | succinyl-diaminopimelate desuccinylase | - |
| I3W_RS16120 () | 2843336..2843536 | + | 201 | WP_000383836.1 | YpfN family protein | - |
| I3W_RS16125 () | 2843617..2844315 | - | 699 | WP_000679823.1 | esterase | - |
| I3W_RS16130 () | 2844389..2846404 | - | 2016 | WP_000829294.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| I3W_RS16135 () | 2846419..2847282 | - | 864 | WP_001267498.1 | neutral zinc metallopeptidase | - |
| I3W_RS16140 () | 2847429..2847827 | - | 399 | WP_000911329.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| I3W_RS16145 () | 2847827..2848054 | - | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| I3W_RS16150 () | 2848209..2848922 | - | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| I3W_RS16155 () | 2849135..2850169 | - | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| I3W_RS16160 () | 2850186..2851064 | - | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| I3W_RS16165 () | 2851210..2851782 | + | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| I3W_RS16170 () | 2851782..2852252 | + | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| I3W_RS16175 () | 2852505..2853122 | + | 618 | WP_001295470.1 | hydrogenase 4 subunit HyfA | - |
| I3W_RS16180 () | 2853122..2855139 | + | 2018 | Protein_2745 | hydrogenase 4 subunit B | - |
| I3W_RS16185 () | 2855150..2856097 | + | 948 | WP_001317255.1 | hydrogenase 4 subunit HyfC | - |
| I3W_RS16190 () | 2856114..2857344 | + | 1231 | Protein_2747 | hydrogenase 4 subunit D | - |
| I3W_RS16195 () | 2857356..2858006 | + | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| I3W_RS16200 () | 2858011..2859591 | + | 1581 | WP_069916399.1 | hydrogenase 4 subunit F | - |
| I3W_RS16205 () | 2859581..2861296 | + | 1716 | WP_001102298.1 | hydrogenase 4 catalytic subunit HyfG | - |
| I3W_RS16210 () | 2861306..2861845 | + | 540 | WP_045172342.1 | hydrogenase 4 subunit H | - |
| I3W_RS16215 () | 2861842..2862599 | + | 758 | Protein_2752 | hydrogenase 4 catalytic subunit HyfI | - |
| I3W_RS16220 () | 2862592..2863005 | + | 414 | WP_001307332.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| I3W_RS16225 () | 2863035..2865047 | + | 2013 | WP_001251577.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| I3W_RS16230 () | 2865069..2865917 | + | 849 | WP_096941801.1 | formate transporter | - |
| I3W_RS16240 () | 2865955..2867016 | - | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| I3W_RS16245 () | 2867229..2868692 | + | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| I3W_RS16250 () | 2868713..2869072 | + | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| I3W_RS16255 () | 2869210..2869911 | - | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| I3W_RS16260 () | 2870006..2871295 | - | 1290 | WP_001307334.1 | uracil permease | - |
| I3W_RS16265 () | 2871381..2872007 | - | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| I3W_RS16275 () | 2872332..2873369 | + | 1038 | WP_001299062.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| I3W_RS16280 () | 2873369..2874007 | + | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| I3W_RS16285 () | 2874178..2876244 | + | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| I3W_RS16290 () | 2876249..2877790 | + | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| I3W_RS16295 () | 2877829..2880072 | - | 2244 | WP_108942445.1 | hypothetical protein | VF |
| I3W_RS16300 () | 2880254..2880406 | - | 153 | WP_000017552.1 | hypothetical protein | - |
| I3W_RS16305 () | 2880424..2880615 | + | 192 | WP_000076001.1 | DUF2633 family protein | - |
| I3W_RS16315 () | 2880926..2881444 | + | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| I3W_RS16320 () | 2881460..2881999 | + | 540 | WP_000755179.1 | DUF5384 family protein | - |
| I3W_RS27925 () | 2882434..2882988 | + | 555 | WP_001544042.1 | hypothetical protein | - |
| I3W_RS16325 () | 2882922..2884133 | + | 1212 | WP_197733976.1 | hypothetical protein | - |
| I3W_RS16330 () | 2884517..2885425 | + | 909 | WP_023308156.1 | hypothetical protein | - |
| I3W_RS16335 () | 2885776..2886492 | - | 717 | WP_023308157.1 | Fic family protein | - |
| I3W_RS16340 () | 2886485..2887153 | - | 669 | WP_023308158.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|