MGE detailed information
MGE type: Genomic_island MGE length: 10803 bp
Accession: NZ_CP027724 Location: 4549218..4560020 Organism: Pseudomonas orientalis strain L1-3-08 Replicon: chromosome
Accession: NZ_CP027724 Location: 4549218..4560020 Organism: Pseudomonas orientalis strain L1-3-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J97_RS20550 () | 4544920..4545705 | - | 786 | WP_057723730.1 | ABC transporter substrate-binding protein | - |
| C4J97_RS20555 () | 4545748..4546026 | + | 279 | WP_124424702.1 | hypothetical protein | - |
| C4J97_RS20560 () | 4546400..4548355 | - | 1956 | WP_124424703.1 | acetate--CoA ligase | - |
| C4J97_RS20565 () | 4548755..4549024 | + | 270 | WP_124424704.1 | DUF2790 domain-containing protein | - |
| C4J97_RS27450 () | 4549033..4549203 | - | 171 | WP_164485107.1 | hypothetical protein | - |
| C4J97_RS20570 () | 4549218..4549631 | - | 414 | WP_076949631.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C4J97_RS20575 () | 4549628..4549858 | - | 231 | WP_124424705.1 | AbrB family transcriptional regulator | Antitoxin Detail |
| C4J97_RS20580 () | 4550340..4551590 | + | 1251 | WP_124359511.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| C4J97_RS20585 () | 4551838..4553973 | + | 2136 | WP_164485108.1 | hypothetical protein | VF |
| C4J97_RS20590 () | 4553977..4555359 | + | 1383 | WP_124424707.1 | hypothetical protein | - |
| C4J97_RS20595 () | 4555401..4556387 | - | 987 | WP_124425648.1 | DNA (cytosine-5-)-methyltransferase | - |
| C4J97_RS20600 () | 4556469..4557656 | + | 1188 | WP_124424708.1 | restriction endonuclease | - |
| C4J97_RS20605 () | 4557657..4558100 | + | 444 | WP_124424709.1 | DNA mismatch endonuclease Vsr | - |
| C4J97_RS20610 () | 4558464..4558994 | + | 531 | WP_124424710.1 | Bro-N domain-containing protein | - |
| C4J97_RS20615 () | 4559082..4560020 | + | 939 | WP_124424711.1 | SH3 domain-containing protein | - |
| C4J97_RS20620 () | 4560222..4560509 | + | 288 | WP_164485125.1 | HNH endonuclease | - |
| C4J97_RS20625 () | 4560582..4561229 | + | 648 | WP_065887762.1 | HAD-IB family hydrolase | - |
| C4J97_RS20630 () | 4561321..4562080 | - | 760 | Protein_3951 | substrate-binding domain-containing protein | - |
| C4J97_RS20635 () | 4562080..4562576 | + | 497 | Protein_3952 | hypothetical protein | - |
| C4J97_RS20640 () | 4562631..4563578 | + | 948 | WP_124424712.1 | hypothetical protein | - |
| C4J97_RS20645 () | 4563686..4564066 | + | 381 | WP_124424713.1 | helix-turn-helix transcriptional regulator | - |
| C4J97_RS20650 () | 4563996..4564552 | - | 557 | Protein_3955 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|