MGE detailed information
MGE type: Genomic_island MGE length: 62242 bp
Accession: NZ_CP027599 Location: 5392162..5454403 Organism: Escherichia coli strain 97-3250 Replicon: chromosome
Accession: NZ_CP027599 Location: 5392162..5454403 Organism: Escherichia coli strain 97-3250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A06_RS29800 () | 5387312..5388883 | - | 1572 | WP_032325301.1 | IS66 family transposase | - |
| C7A06_RS29805 () | 5388880..5390499 | - | 1620 | WP_001375513.1 | ISL3-like element ISEc38 family transposase | - |
| C7A06_RS29810 () | 5390595..5391374 | + | 780 | Protein_5482 | IS4 family transposase | - |
| C7A06_RS29820 () | 5392162..5393811 | + | 1650 | WP_001121617.1 | hypothetical protein | VF |
| C7A06_RS29825 () | 5394029..5394178 | + | 150 | Protein_5484 | IS1 family transposase | - |
| C7A06_RS29830 () | 5394419..5395408 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| C7A06_RS29835 () | 5395457..5396131 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| C7A06_RS29840 () | 5396467..5397408 | + | 942 | Protein_5487 | IS630 family transposase ISEc33 | Transposase |
| C7A06_RS29845 () | 5398009..5407680 | + | 9672 | WP_001239078.1 | Toxin B | VF |
| C7A06_RS29850 () | 5407852..5408202 | + | 351 | Protein_5489 | IS256 family transposase ISEic2 | Transposase |
| C7A06_RS29855 () | 5408616..5409239 | - | 624 | WP_001443729.1 | Secreted effector protein EspF(U) | VF |
| C7A06_RS29860 () | 5409455..5409733 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| C7A06_RS29865 () | 5409739..5409960 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| C7A06_RS29870 () | 5409997..5410404 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| C7A06_RS29875 () | 5410411..5411355 | - | 945 | WP_001092012.1 | Protein EaeB | VF |
| C7A06_RS29880 () | 5411376..5412518 | - | 1143 | WP_000935769.1 | hypothetical protein | VF |
| C7A06_RS29885 () | 5412531..5413109 | - | 579 | WP_000381555.1 | Secreted effector protein SseB | VF |
| C7A06_RS29890 () | 5413167..5414222 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| C7A06_RS29895 () | 5414365..5415585 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| C7A06_RS29900 () | 5415800..5418619 | - | 2820 | WP_000627895.1 | Intimin | VF |
| C7A06_RS29905 () | 5418680..5419150 | - | 471 | WP_000098786.1 | Tir chaperone | VF |
| C7A06_RS29910 () | 5419283..5420899 | - | 1617 | WP_001121330.1 | Translocated intimin receptor Tir | VF |
| C7A06_RS29915 () | 5421346..5421957 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| C7A06_RS29920 () | 5422208..5422567 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| C7A06_RS29925 () | 5422786..5423301 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| C7A06_RS29930 () | 5423332..5424249 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| C7A06_RS29935 () | 5424212..5424628 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| C7A06_RS29940 () | 5424621..5424941 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| C7A06_RS29945 () | 5425001..5426341 | - | 1341 | WP_000599711.1 | putative ATP synthase YscN | VF |
| C7A06_RS29950 () | 5426325..5428352 | - | 2028 | WP_001037820.1 | Secretion system apparatus protein SsaV | VF |
| C7A06_RS29955 () | 5428349..5428702 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| C7A06_RS29960 () | 5428886..5429188 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| C7A06_RS29965 () | 5429272..5429649 | + | 378 | WP_001059794.1 | hypothetical protein | VF |
| C7A06_RS29970 () | 5429651..5430223 | + | 573 | WP_001233824.1 | Yop proteins translocation lipoprotein J | VF |
| C7A06_RS29975 () | 5430229..5430684 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| C7A06_RS29980 () | 5430684..5432222 | + | 1539 | WP_000723928.1 | Type III secretion system outer membrane protein SpiA | VF |
| C7A06_RS29985 () | 5432236..5432691 | + | 456 | WP_000087469.1 | Chaperone protein SicA | VF |
| C7A06_RS29990 () | 5433077..5433490 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| C7A06_RS29995 () | 5433565..5433921 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| C7A06_RS30000 () | 5434118..5434576 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| C7A06_RS30005 () | 5434573..5435610 | - | 1038 | WP_001291687.1 | Yop proteins translocation protein U | VF |
| C7A06_RS30010 () | 5435603..5436379 | - | 777 | WP_001002808.1 | Surface presentation of antigens protein SpaR | VF |
| C7A06_RS30015 () | 5436379..5436648 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| C7A06_RS30020 () | 5436648..5437301 | - | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| C7A06_RS30025 () | 5437306..5437959 | - | 654 | WP_000780744.1 | hypothetical protein | VF |
| C7A06_RS30030 () | 5437946..5438545 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| C7A06_RS30035 () | 5438542..5438856 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| C7A06_RS30040 () | 5438869..5439087 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| C7A06_RS30045 () | 5439102..5439473 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| C7A06_RS30050 () | 5440681..5441826 | + | 1146 | WP_000606968.1 | Cysteine protease-like VirA | VF |
| C7A06_RS30055 () | 5441973..5442791 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| C7A06_RS30060 () | 5442997..5443572 | + | 576 | Protein_5531 | hypothetical protein | VF |
| C7A06_RS30070 () | 5443619..5444169 | + | 551 | Protein_5532 | IS3 family transposase IS2 | Transposase |
| C7A06_RS30075 () | 5444154..5444303 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| C7A06_RS30085 () | 5445052..5446590 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C7A06_RS30095 () | 5446956..5448290 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C7A06_RS30100 () | 5448370..5450517 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C7A06_RS30105 () | 5450576..5452033 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| C7A06_RS30110 () | 5452270..5453787 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C7A06_RS30115 () | 5453906..5454079 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C7A06_RS30120 () | 5454107..5454403 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C7A06_RS30130 () | 5454630..5454902 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C7A06_RS30135 () | 5454914..5455144 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C7A06_RS30140 () | 5455325..5456956 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| C7A06_RS30145 () | 5456953..5457672 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|