MGE detailed information
MGE type: Genomic_island MGE length: 65524 bp
Accession: NZ_CP027582 Location: 3823151..3888674 Organism: Escherichia coli strain 2013C-4538 Replicon: chromosome
Accession: NZ_CP027582 Location: 3823151..3888674 Organism: Escherichia coli strain 2013C-4538 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6999_RS21035 () | 3819246..3819821 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| C6999_RS21045 () | 3820201..3821466 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C6999_RS21050 () | 3821583..3823154 | - | 1572 | WP_000704132.1 | IS66 family transposase | - |
| C6999_RS21055 () | 3823151..3824770 | - | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| C6999_RS21060 () | 3824866..3825645 | + | 780 | Protein_3842 | IS4 family transposase ISEc13 | Transposase |
| C6999_RS21070 () | 3826433..3828082 | + | 1650 | WP_001121617.1 | hypothetical protein | VF |
| C6999_RS21075 () | 3828300..3828449 | + | 150 | Protein_3844 | IS1 family transposase | - |
| C6999_RS21080 () | 3828690..3829679 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| C6999_RS21085 () | 3829728..3830402 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| C6999_RS21090 () | 3830738..3831679 | + | 942 | Protein_3847 | IS630 family transposase ISEc33 | Transposase |
| C6999_RS21095 () | 3832280..3841951 | + | 9672 | WP_001239078.1 | hypothetical protein | VF |
| C6999_RS21100 () | 3842123..3842473 | + | 351 | Protein_3849 | IS256 family transposase ISEic2 | Transposase |
| C6999_RS21105 () | 3842886..3843509 | - | 624 | WP_001443729.1 | hypothetical protein | VF |
| C6999_RS21110 () | 3843725..3844003 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| C6999_RS21115 () | 3844009..3844230 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| C6999_RS21120 () | 3844267..3844674 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| C6999_RS21125 () | 3844681..3845625 | - | 945 | WP_001092012.1 | hypothetical protein | VF |
| C6999_RS21130 () | 3845646..3846788 | - | 1143 | WP_000935768.1 | hypothetical protein | VF |
| C6999_RS21135 () | 3846801..3847379 | - | 579 | WP_000381555.1 | hypothetical protein | VF |
| C6999_RS21140 () | 3847437..3848492 | - | 1056 | WP_032278427.1 | hypothetical protein | VF |
| C6999_RS21145 () | 3848635..3849855 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| C6999_RS21150 () | 3850070..3852889 | - | 2820 | WP_032278426.1 | hypothetical protein | VF |
| C6999_RS21155 () | 3852950..3853420 | - | 471 | WP_000098785.1 | hypothetical protein | VF |
| C6999_RS21160 () | 3853553..3855169 | - | 1617 | WP_001121330.1 | hypothetical protein | VF |
| C6999_RS21165 () | 3855616..3856227 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| C6999_RS21170 () | 3856479..3856838 | + | 360 | WP_097452865.1 | hypothetical protein | VF |
| C6999_RS21175 () | 3857057..3857572 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| C6999_RS21180 () | 3857603..3858520 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| C6999_RS21185 () | 3858483..3858899 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| C6999_RS21190 () | 3858892..3859212 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| C6999_RS21195 () | 3859272..3860612 | - | 1341 | WP_000599711.1 | ATP synthase subunit beta | VF |
| C6999_RS21200 () | 3860596..3862623 | - | 2028 | WP_001037819.1 | hypothetical protein | VF |
| C6999_RS21205 () | 3862620..3862973 | - | 354 | WP_001050415.1 | hypothetical protein | VF |
| C6999_RS21210 () | 3863157..3863459 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| C6999_RS21215 () | 3863543..3863920 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| C6999_RS21220 () | 3863922..3864494 | + | 573 | WP_001233824.1 | hypothetical protein | VF |
| C6999_RS21225 () | 3864500..3864955 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| C6999_RS21230 () | 3864955..3866493 | + | 1539 | WP_000723928.1 | hypothetical protein | VF |
| C6999_RS21235 () | 3866507..3866962 | + | 456 | WP_000087469.1 | hypothetical protein | VF |
| C6999_RS21240 () | 3867348..3867761 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| C6999_RS21245 () | 3867836..3868192 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| C6999_RS21250 () | 3868389..3868847 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| C6999_RS21255 () | 3868844..3869881 | - | 1038 | WP_001291687.1 | hypothetical protein | VF |
| C6999_RS21260 () | 3869874..3870650 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| C6999_RS21265 () | 3870650..3870919 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| C6999_RS21270 () | 3870919..3871572 | - | 654 | WP_001299990.1 | hypothetical protein | VF |
| C6999_RS21275 () | 3871577..3872230 | - | 654 | WP_000780744.1 | hypothetical protein | VF |
| C6999_RS21280 () | 3872217..3872816 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| C6999_RS21285 () | 3872813..3873127 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| C6999_RS21290 () | 3873140..3873358 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| C6999_RS21295 () | 3873373..3873744 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| C6999_RS21300 () | 3874952..3876097 | + | 1146 | WP_000606968.1 | hypothetical protein | VF |
| C6999_RS21305 () | 3876244..3877062 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| C6999_RS21310 () | 3877268..3877843 | + | 576 | Protein_3891 | hypothetical protein | VF |
| C6999_RS21320 () | 3877890..3878440 | + | 551 | Protein_3892 | IS3 family transposase IS2 | Transposase |
| C6999_RS21325 () | 3878425..3878574 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| C6999_RS21335 () | 3879323..3880861 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C6999_RS21345 () | 3881227..3882561 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C6999_RS21350 () | 3882641..3884788 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C6999_RS21355 () | 3884847..3886304 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| C6999_RS21360 () | 3886541..3888058 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C6999_RS21365 () | 3888177..3888350 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C6999_RS21370 () | 3888378..3888674 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C6999_RS21380 () | 3888901..3889173 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C6999_RS21385 () | 3889185..3889415 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C6999_RS21390 () | 3889596..3891227 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| C6999_RS21395 () | 3891224..3891943 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|