MGE detailed information
MGE type: Prophage MGE length: 60369 bp
Accession: NZ_CP027577 Location: 976817..1037185 Organism: Escherichia coli strain 2013C-4225 Replicon: chromosome
Accession: NZ_CP027577 Location: 976817..1037185 Organism: Escherichia coli strain 2013C-4225 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6997_RS05015 () | 972686..973183 | + | 498 | WP_001295693.1 | chorismate lyase | - |
| C6997_RS05020 () | 973196..974068 | + | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6997_RS05025 () | 974223..976646 | - | 2424 | WP_001301502.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6997_RS05030 () | 976817..977185 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6997_RS05035 () | 977295..977903 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6997_RS05040 () | 977976..979301 | + | 1326 | WP_001298861.1 | MATE family efflux transporter DinF | - |
| C6997_RS05045 () | 979417..979626 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| C6997_RS05050 () | 979668..980183 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6997_RS05060 () | 980501..981486 | + | 986 | Protein_898 | DUF2713 domain-containing protein | - |
| C6997_RS05065 () | 981849..981971 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| C6997_RS05070 () | 982207..982779 | + | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| C6997_RS05075 () | 982809..983195 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| C6997_RS31515 () | 983235..983408 | + | 174 | WP_000390073.1 | hypothetical protein | - |
| C6997_RS05080 () | 983456..983737 | - | 282 | WP_001093919.1 | pyocin activator PrtN family protein | - |
| C6997_RS05085 () | 983774..984346 | - | 573 | WP_001061338.1 | 3'-5' exoribonuclease | - |
| C6997_RS05090 () | 984346..984912 | - | 567 | WP_000628776.1 | DUF551 domain-containing protein | - |
| C6997_RS31135 () | 985246..985424 | - | 179 | Protein_906 | hypothetical protein | - |
| C6997_RS05100 () | 985426..985974 | - | 549 | WP_000192143.1 | ead/Ea22-like family protein | - |
| C6997_RS05105 () | 985971..986195 | - | 225 | WP_000015506.1 | hypothetical protein | - |
| C6997_RS05110 () | 986192..986803 | - | 612 | WP_001242710.1 | hypothetical protein | - |
| C6997_RS05115 () | 986794..987330 | - | 537 | WP_000008177.1 | 5'-deoxynucleotidase | - |
| C6997_RS05120 () | 987458..988282 | - | 825 | WP_021522371.1 | YfdQ family protein | - |
| C6997_RS05125 () | 988348..988710 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| C6997_RS05130 () | 989168..989821 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| C6997_RS05135 () | 989917..990114 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| C6997_RS05140 () | 990142..990726 | + | 585 | WP_000514178.1 | hypothetical protein | - |
| C6997_RS05145 () | 990723..991868 | + | 1146 | WP_044863395.1 | Rha family phage regulatory protein | - |
| C6997_RS05150 () | 991865..992089 | + | 225 | WP_000620696.1 | hypothetical protein | - |
| C6997_RS05155 () | 992086..992904 | + | 819 | WP_032343211.1 | helix-turn-helix domain-containing protein | - |
| C6997_RS05160 () | 992901..993395 | + | 495 | WP_023441586.1 | PerC family transcriptional regulator | - |
| C6997_RS05165 () | 993395..994048 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| C6997_RS05170 () | 994045..994371 | + | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| C6997_RS05175 () | 994368..994757 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6997_RS05180 () | 994777..995586 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| C6997_RS05185 () | 995602..996117 | + | 516 | WP_001223334.1 | hypothetical protein | - |
| C6997_RS05190 () | 996127..997116 | + | 990 | WP_032317762.1 | DUF968 domain-containing protein | - |
| C6997_RS05195 () | 997130..997882 | + | 753 | WP_001047129.1 | antitermination protein | - |
| C6997_RS05210 () | 998450..999397 | + | 948 | WP_000691354.1 | hypothetical protein | VF |
| C6997_RS05215 () | 999407..999676 | + | 270 | WP_000752026.1 | hypothetical protein | VF |
| C6997_RS05225 () | 1000177..1002114 | + | 1938 | WP_100038732.1 | DUF1737 domain-containing protein | - |
| C6997_RS05230 () | 1002250..1002429 | + | 180 | WP_033815707.1 | DUF1378 family protein | - |
| C6997_RS05235 () | 1002470..1002742 | + | 273 | WP_001290221.1 | DUF826 domain-containing protein | - |
| C6997_RS05240 () | 1002819..1003034 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| C6997_RS05245 () | 1003039..1003572 | + | 534 | WP_000087733.1 | lysozyme | - |
| C6997_RS05250 () | 1003846..1004541 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| C6997_RS31140 () | 1004636..1004767 | + | 132 | WP_001280922.1 | hypothetical protein | - |
| C6997_RS31150 () | 1004990..1005175 | + | 186 | WP_071529499.1 | Rz1 family lipoprotein | - |
| C6997_RS05260 () | 1005414..1005965 | + | 552 | WP_001109019.1 | Rha family transcriptional regulator | - |
| C6997_RS05275 () | 1006311..1006637 | + | 327 | WP_000828068.1 | TonB family protein | - |
| C6997_RS05280 () | 1006769..1006969 | - | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| C6997_RS05285 () | 1007011..1007376 | + | 366 | WP_000829190.1 | HNH endonuclease | - |
| C6997_RS05295 () | 1007665..1008228 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| C6997_RS05300 () | 1008225..1009886 | + | 1662 | WP_001368653.1 | terminase large subunit | - |
| C6997_RS05305 () | 1009950..1011887 | + | 1938 | WP_106918316.1 | phage major capsid protein | - |
| C6997_RS05310 () | 1011932..1012153 | + | 222 | WP_001063096.1 | hypothetical protein | - |
| C6997_RS05315 () | 1012099..1014683 | + | 2585 | Protein_945 | phage portal protein | - |
| C6997_RS05320 () | 1014680..1015006 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| C6997_RS05325 () | 1015016..1015366 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C6997_RS05330 () | 1015363..1015809 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C6997_RS05335 () | 1015806..1016150 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6997_RS05340 () | 1016217..1016933 | + | 717 | WP_001275476.1 | immunoglobulin domain-containing protein | - |
| C6997_RS05345 () | 1016939..1017313 | + | 375 | WP_001030040.1 | phage tail assembly chaperone | - |
| C6997_RS05350 () | 1017409..1017618 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6997_RS05355 () | 1017670..1020755 | + | 3086 | Protein_953 | phage tail tape measure protein | - |
| C6997_RS05360 () | 1020748..1021089 | + | 342 | WP_000807964.1 | phage tail protein | - |
| C6997_RS05365 () | 1021089..1021787 | + | 699 | WP_001357740.1 | phage minor tail protein L | - |
| C6997_RS05370 () | 1021798..1022541 | + | 744 | WP_001356665.1 | C40 family peptidase | - |
| C6997_RS05375 () | 1022487..1023119 | + | 633 | WP_122999208.1 | tail assembly protein | - |
| C6997_RS05390 () | 1023355..1026830 | + | 3476 | Protein_958 | host specificity protein J | - |
| C6997_RS05395 () | 1026897..1027496 | + | 600 | WP_001230429.1 | hypothetical protein | VF |
| C6997_RS05400 () | 1027561..1028874 | + | 1314 | WP_106918319.1 | ISNCY family transposase KIS | Transposase |
| C6997_RS05405 () | 1028876..1029145 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6997_RS05420 () | 1029286..1030160 | + | 875 | Protein_962 | hypothetical protein | VF |
| C6997_RS31155 () | 1030385..1031035 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| C6997_RS05435 () | 1031039..1031305 | - | 267 | Protein_964 | hypothetical protein | - |
| C6997_RS05440 () | 1031629..1031877 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| C6997_RS05445 () | 1031939..1033036 | - | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6997_RS05450 () | 1033125..1034162 | + | 1038 | WP_000543823.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6997_RS05455 () | 1034296..1034538 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| C6997_RS05460 () | 1034704..1035687 | - | 984 | WP_000235522.1 | L-threonine 3-dehydrogenase | VF |
| C6997_RS05465 () | 1035770..1037185 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6997_RS05470 () | 1037238..1038335 | + | 1098 | WP_001147329.1 | alanine racemase | - |
| C6997_RS05475 () | 1038570..1039763 | + | 1194 | WP_000486997.1 | aromatic amino acid transaminase | - |
| C6997_RS31520 () | 1039985..1040488 | - | 504 | WP_001027716.1 | hypothetical protein | - |
| C6997_RS05485 () | 1040890..1041603 | + | 714 | WP_001375558.1 | acid phosphatase AphA | - |
| C6997_RS05490 () | 1041714..1042130 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|