MGE detailed information
MGE type: Genomic_island MGE length: 11458 bp
Accession: NZ_CP027577 Location: 5556670..5568127 Organism: Escherichia coli strain 2013C-4225 Replicon: chromosome
Accession: NZ_CP027577 Location: 5556670..5568127 Organism: Escherichia coli strain 2013C-4225 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6997_RS30085 () | 5552995..5554203 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| C6997_RS30090 () | 5554229..5555560 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| C6997_RS30095 () | 5555582..5556571 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C6997_RS30105 () | 5556670..5557608 | - | 939 | WP_000104212.1 | transcriptional regulator TdcA | - |
| C6997_RS31865 () | 5557923..5558141 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| C6997_RS30115 () | 5558397..5558938 | + | 542 | Protein_5477 | hypothetical protein | - |
| C6997_RS31710 () | 5558960..5559568 | + | 609 | WP_000484558.1 | hypothetical protein | - |
| C6997_RS31715 () | 5559713..5560147 | + | 435 | WP_095585493.1 | hypothetical protein | - |
| C6997_RS30130 () | 5560951..5562096 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| C6997_RS30135 () | 5562193..5563083 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C6997_RS30140 () | 5563113..5563883 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C6997_RS30145 () | 5563899..5565233 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C6997_RS30150 () | 5565608..5567179 | + | 1572 | WP_001273779.1 | galactarate dehydratase | - |
| C6997_RS30155 () | 5567328..5567663 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C6997_RS30160 () | 5567663..5568127 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C6997_RS30165 () | 5568182..5568991 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| C6997_RS30175 () | 5569240..5570520 | + | 1281 | WP_000681914.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C6997_RS30180 () | 5570543..5571016 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C6997_RS30185 () | 5571027..5571806 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C6997_RS30190 () | 5571796..5572674 | + | 879 | WP_001341890.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C6997_RS30195 () | 5572692..5573126 | + | 435 | WP_000948822.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|