MGE detailed information
MGE type: Genomic_island MGE length: 11441 bp
Accession: NZ_CP027552 Location: 5382961..5394401 Organism: Escherichia coli strain 2015C-4498 Replicon: chromosome
Accession: NZ_CP027552 Location: 5382961..5394401 Organism: Escherichia coli strain 2015C-4498 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6953_RS28880 () | 5379286..5380494 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| C6953_RS28885 () | 5380520..5381851 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| C6953_RS28890 () | 5381873..5382862 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C6953_RS28900 () | 5382961..5383899 | - | 939 | WP_044805621.1 | transcriptional regulator TdcA | - |
| C6953_RS30350 () | 5384214..5384432 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| C6953_RS28910 () | 5384688..5385227 | + | 540 | WP_000675745.1 | hypothetical protein | - |
| C6953_RS28915 () | 5385249..5386436 | + | 1188 | WP_044805618.1 | YhaC family protein | - |
| C6953_RS28925 () | 5387240..5388385 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| C6953_RS28930 () | 5388482..5389372 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C6953_RS28935 () | 5389402..5390172 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C6953_RS28940 () | 5390188..5391507 | - | 1320 | WP_044805617.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C6953_RS28945 () | 5391882..5393453 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| C6953_RS28950 () | 5393602..5393937 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C6953_RS28955 () | 5393937..5394401 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C6953_RS28960 () | 5394456..5395265 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| C6953_RS28970 () | 5395514..5396794 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C6953_RS28975 () | 5396817..5397290 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C6953_RS28980 () | 5397301..5398080 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C6953_RS28985 () | 5398070..5398948 | + | 879 | WP_001341890.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C6953_RS28990 () | 5398966..5399400 | + | 435 | WP_000948822.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|