MGE detailed information
MGE type: Genomic_island MGE length: 11778 bp
Accession: NZ_CP027454 Location: 5320063..5331840 Organism: Escherichia coli strain 2014C-4423 Replicon: chromosome
Accession: NZ_CP027454 Location: 5320063..5331840 Organism: Escherichia coli strain 2014C-4423 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W74_RS28260 () | 5316388..5317596 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| C6W74_RS28265 () | 5317622..5318953 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| C6W74_RS28270 () | 5318975..5319964 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C6W74_RS28280 () | 5320063..5321001 | - | 939 | WP_000104217.1 | transcriptional regulator TdcA | - |
| C6W74_RS30210 () | 5321316..5321534 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| C6W74_RS28290 () | 5321790..5322329 | + | 540 | WP_000675743.1 | hypothetical protein | - |
| C6W74_RS28295 () | 5322351..5323517 | + | 1167 | WP_032209778.1 | YhaC family protein | - |
| C6W74_RS28305 () | 5324664..5325809 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| C6W74_RS28310 () | 5325906..5326796 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C6W74_RS28315 () | 5326826..5327596 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C6W74_RS28320 () | 5327612..5328946 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C6W74_RS28325 () | 5329321..5330892 | + | 1572 | WP_001273771.1 | galactarate dehydratase | - |
| C6W74_RS28330 () | 5331041..5331376 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C6W74_RS28335 () | 5331376..5331840 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C6W74_RS28340 () | 5331895..5332704 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| C6W74_RS28350 () | 5332953..5334233 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C6W74_RS28355 () | 5334256..5334729 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C6W74_RS28360 () | 5334740..5335519 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C6W74_RS28365 () | 5335509..5336387 | + | 879 | WP_001341890.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C6W74_RS28370 () | 5336405..5336839 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|