MGE detailed information
MGE type: Prophage MGE length: 55333 bp
Accession: NZ_CP027445 Location: 2587700..2643032 Organism: Escherichia coli strain 2013C-3492 Replicon: chromosome
Accession: NZ_CP027445 Location: 2587700..2643032 Organism: Escherichia coli strain 2013C-3492 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W68_RS14090 () | 2584428..2584892 | - | 465 | WP_047087755.1 | redox-sensitive transcriptional activator SoxR | - |
| C6W68_RS14095 () | 2584978..2585301 | + | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| C6W68_RS14100 () | 2585304..2586890 | - | 1587 | WP_032206038.1 | c-di-GMP phosphodiesterase PdeC | - |
| C6W68_RS14110 () | 2587320..2587601 | + | 282 | WP_001295689.1 | YjcB family protein | - |
| C6W68_RS14115 () | 2587700..2588236 | - | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| C6W68_RS14120 () | 2588490..2591312 | + | 2823 | WP_047087754.1 | excinuclease ABC subunit UvrA | - |
| C6W68_RS14125 () | 2591347..2591703 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| C6W68_RS14130 () | 2591707..2592123 | - | 417 | WP_000270372.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C6W68_RS14135 () | 2592234..2592947 | - | 714 | WP_032206039.1 | acid phosphatase AphA | - |
| C6W68_RS28675 () | 2593349..2593834 | + | 486 | WP_001027707.1 | hypothetical protein | - |
| C6W68_RS14145 () | 2594056..2595249 | - | 1194 | WP_000486994.1 | aromatic amino acid transaminase | - |
| C6W68_RS14150 () | 2595502..2596581 | - | 1080 | WP_032206040.1 | alanine racemase | - |
| C6W68_RS14155 () | 2596634..2598049 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6W68_RS14160 () | 2598132..2599115 | + | 984 | WP_000235516.1 | hypothetical protein | VF |
| C6W68_RS14165 () | 2599281..2599523 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| C6W68_RS14170 () | 2599657..2600694 | - | 1038 | WP_072176623.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6W68_RS14175 () | 2600783..2601880 | + | 1098 | WP_000332258.1 | hypothetical protein ; Integrase | Integrase |
| C6W68_RS14180 () | 2601929..2602177 | + | 249 | WP_047087753.1 | DinI-like family protein | - |
| C6W68_RS14190 () | 2602338..2602979 | - | 642 | WP_001143783.1 | hypothetical protein | VF |
| C6W68_RS14195 () | 2603061..2603690 | - | 630 | WP_072140863.1 | hypothetical protein | VF |
| C6W68_RS14200 () | 2603758..2604339 | - | 582 | WP_001118085.1 | hypothetical protein | VF |
| C6W68_RS14205 () | 2604380..2604448 | - | 69 | Protein_2599 | tail assembly protein | - |
| C6W68_RS14210 () | 2604450..2604719 | - | 270 | WP_001023445.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6W68_RS14215 () | 2604721..2606025 | - | 1305 | WP_106888168.1 | ISNCY family transposase KIS | Transposase |
| C6W68_RS14220 () | 2606090..2606688 | - | 599 | Protein_2602 | hypothetical protein | VF |
| C6W68_RS14225 () | 2606755..2610234 | - | 3480 | WP_106888169.1 | host specificity protein J | - |
| C6W68_RS14230 () | 2610480..2611112 | - | 633 | WP_122993104.1 | tail assembly protein | - |
| C6W68_RS14235 () | 2611058..2611801 | - | 744 | WP_047088113.1 | C40 family peptidase | - |
| C6W68_RS14240 () | 2611812..2612510 | - | 699 | WP_047088114.1 | phage minor tail protein L | - |
| C6W68_RS14245 () | 2612510..2612851 | - | 342 | WP_000807944.1 | phage tail protein | - |
| C6W68_RS14250 () | 2612844..2616086 | - | 3243 | WP_060552897.1 | phage tail tape measure protein | - |
| C6W68_RS14255 () | 2616134..2616343 | - | 210 | WP_122993099.1 | DUF4035 domain-containing protein | - |
| C6W68_RS14260 () | 2616439..2616813 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C6W68_RS14265 () | 2616819..2617535 | - | 717 | WP_001275477.1 | tail protein | - |
| C6W68_RS14270 () | 2617602..2617946 | - | 345 | WP_000133391.1 | DUF3168 domain-containing protein | - |
| C6W68_RS14275 () | 2617943..2618389 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C6W68_RS14280 () | 2618386..2618736 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C6W68_RS14285 () | 2618746..2619072 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| C6W68_RS14290 () | 2619069..2621167 | - | 2099 | Protein_2616 | phage portal protein | - |
| C6W68_RS14295 () | 2621113..2621334 | - | 222 | WP_032274028.1 | hypothetical protein | - |
| C6W68_RS14300 () | 2621379..2623319 | - | 1941 | WP_047087555.1 | phage major capsid protein | - |
| C6W68_RS14305 () | 2623383..2625044 | - | 1662 | WP_047087554.1 | terminase large subunit | - |
| C6W68_RS14310 () | 2625041..2625604 | - | 564 | Protein_2620 | terminase small subunit | - |
| C6W68_RS14320 () | 2625892..2626257 | - | 366 | WP_024224188.1 | HNH endonuclease | - |
| C6W68_RS14325 () | 2626299..2626499 | + | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| C6W68_RS14335 () | 2626792..2627049 | - | 258 | WP_001283921.1 | hypothetical protein | - |
| C6W68_RS14340 () | 2627046..2627543 | - | 498 | WP_000839224.1 | KilA-N domain-containing protein | - |
| C6W68_RS14345 () | 2627746..2628183 | - | 438 | WP_000092313.1 | lysis protein | - |
| C6W68_RS14350 () | 2628180..2628677 | - | 498 | WP_001135289.1 | lysozyme RrrD | - |
| C6W68_RS14355 () | 2628677..2628892 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| C6W68_RS14365 () | 2629176..2631026 | - | 1851 | WP_060552899.1 | SASA family carbohydrate esterase | - |
| C6W68_RS14370 () | 2631348..2631600 | - | 253 | Protein_2629 | DUF3927 family protein | - |
| C6W68_RS14375 () | 2631597..2632028 | - | 432 | WP_001490213.1 | tellurite resistance TerB family protein | - |
| C6W68_RS14380 () | 2632218..2632427 | - | 210 | WP_047619196.1 | hypothetical protein | - |
| C6W68_RS14385 () | 2632531..2633744 | + | 1214 | WP_167588600.1 | IS3 family transposase IS629 | Transposase |
| C6W68_RS14390 () | 2633788..2634524 | - | 737 | Protein_2633 | IS3 family transposase IS600 | Transposase |
| C6W68_RS14395 () | 2634645..2634833 | + | 189 | WP_001014286.1 | hypothetical protein | - |
| C6W68_RS14400 () | 2634836..2635504 | + | 669 | WP_047087994.1 | DUF550 domain-containing protein | - |
| C6W68_RS14405 () | 2635504..2636076 | + | 573 | WP_001061348.1 | 3'-5' exoribonuclease | - |
| C6W68_RS14410 () | 2636113..2636394 | + | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| C6W68_RS28680 () | 2636442..2636615 | - | 174 | WP_000390069.1 | hypothetical protein | - |
| C6W68_RS14415 () | 2636655..2637041 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| C6W68_RS14420 () | 2637071..2637643 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| C6W68_RS14425 () | 2637878..2638000 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| C6W68_RS14430 () | 2638363..2639348 | - | 986 | Protein_2642 | DUF2713 domain-containing protein | - |
| C6W68_RS14440 () | 2639666..2640181 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6W68_RS14445 () | 2640223..2640432 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| C6W68_RS14450 () | 2640548..2641873 | - | 1326 | WP_032206041.1 | MATE family efflux transporter DinF | - |
| C6W68_RS14455 () | 2641946..2642554 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6W68_RS14460 () | 2642664..2643032 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6W68_RS14465 () | 2643203..2645626 | + | 2424 | WP_032206042.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6W68_RS14470 () | 2645781..2646653 | - | 873 | WP_032206043.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6W68_RS14475 () | 2646666..2647163 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|