MGE detailed information
MGE type: Prophage MGE length: 59304 bp
Accession: NZ_CP027435 Location: 411156..470459 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Accession: NZ_CP027435 Location: 411156..470459 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND02_RS02000 () | 406547..407044 | + | 498 | WP_001295693.1 | chorismate lyase | - |
| ND02_RS02005 () | 407057..407929 | + | 873 | WP_000455240.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| ND02_RS02010 () | 408084..410507 | - | 2424 | WP_000017353.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| ND02_RS02015 () | 410678..411046 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| ND02_RS02020 () | 411156..411764 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| ND02_RS02025 () | 411837..413162 | + | 1326 | WP_001370252.1 | MATE family efflux transporter DinF | - |
| ND02_RS02030 () | 413278..413487 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| ND02_RS02035 () | 413529..414044 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| ND02_RS02040 () | 414362..415348 | + | 987 | WP_000912572.1 | DUF2713 domain-containing protein | - |
| ND02_RS02045 () | 415711..415833 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| ND02_RS02050 () | 416068..416640 | + | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| ND02_RS02055 () | 416670..417056 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| ND02_RS29630 () | 417096..417269 | + | 174 | WP_000390069.1 | hypothetical protein | - |
| ND02_RS02060 () | 417317..417598 | - | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| ND02_RS02065 () | 417635..418207 | - | 573 | WP_001061339.1 | 3'-5' exoribonuclease | - |
| ND02_RS02070 () | 418207..418941 | - | 735 | WP_001094871.1 | DUF551 domain-containing protein | - |
| ND02_RS02075 () | 418944..419135 | - | 192 | WP_001014294.1 | hypothetical protein | - |
| ND02_RS02080 () | 419137..419604 | - | 468 | WP_000829413.1 | hypothetical protein | - |
| ND02_RS02085 () | 419751..420224 | - | 474 | WP_000145671.1 | class I SAM-dependent methyltransferase | - |
| ND02_RS02090 () | 420221..420571 | - | 351 | WP_001242740.1 | hypothetical protein | - |
| ND02_RS02095 () | 420562..420897 | - | 336 | WP_000543621.1 | hypothetical protein | - |
| ND02_RS02105 () | 422254..422412 | - | 159 | Protein_372 | 5'-deoxynucleotidase | - |
| ND02_RS02110 () | 422540..423364 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| ND02_RS02115 () | 423430..423792 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| ND02_RS02125 () | 424250..424903 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| ND02_RS02130 () | 424999..425196 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| ND02_RS02135 () | 425224..425808 | + | 585 | WP_000514175.1 | hypothetical protein | - |
| ND02_RS02140 () | 425805..426971 | + | 1167 | WP_001087349.1 | Rha family phage regulatory protein | - |
| ND02_RS02145 () | 426968..427162 | + | 195 | WP_000626861.1 | hypothetical protein | - |
| ND02_RS29635 () | 427159..427383 | + | 225 | WP_000618008.1 | hypothetical protein | - |
| ND02_RS02155 () | 427380..428204 | + | 825 | WP_000061545.1 | helix-turn-helix domain-containing protein | - |
| ND02_RS02160 () | 428215..429114 | + | 900 | WP_000988265.1 | ATP-binding protein | - |
| ND02_RS02165 () | 429111..430511 | + | 1401 | WP_000203855.1 | replicative DNA helicase | - |
| ND02_RS02170 () | 430508..430765 | + | 258 | WP_001370224.1 | hypothetical protein | - |
| ND02_RS02175 () | 430817..431806 | + | 990 | WP_001370152.1 | DUF968 domain-containing protein | - |
| ND02_RS02180 () | 431820..432206 | + | 387 | Protein_386 | antitermination protein | - |
| ND02_RS02185 () | 432281..433458 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| ND02_RS02190 () | 433468..433833 | + | 366 | Protein_388 | antitermination protein | - |
| ND02_RS02200 () | 434143..434295 | + | 153 | WP_001339373.1 | restriction endonuclease subunit M | - |
| ND02_RS02225 () | 435118..436980 | + | 1863 | WP_000143128.1 | DUF1737 domain-containing protein | - |
| ND02_RS02230 () | 437130..437345 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| ND02_RS02235 () | 437350..437694 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| ND02_RS02240 () | 437745..438278 | + | 534 | WP_000992088.1 | lysozyme | - |
| ND02_RS02245 () | 438549..439118 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ND02_RS29200 () | 439118..439264 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| ND02_RS29205 () | 439487..439672 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| ND02_RS02260 () | 440198..440512 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| ND02_RS02265 () | 440594..440818 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| ND02_RS02275 () | 441205..441750 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| ND02_RS02280 () | 441725..443650 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| ND02_RS02285 () | 443647..443853 | + | 207 | WP_000198153.1 | gpW family protein | - |
| ND02_RS02290 () | 443850..445451 | + | 1602 | WP_024026143.1 | phage portal protein | - |
| ND02_RS02295 () | 445432..446751 | + | 1320 | WP_032212710.1 | S49 family peptidase | - |
| ND02_RS02300 () | 446761..447093 | + | 333 | WP_001299443.1 | head decoration protein | - |
| ND02_RS02305 () | 447149..448174 | + | 1026 | WP_024025845.1 | major capsid protein | - |
| ND02_RS02310 () | 448216..448611 | + | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| ND02_RS02315 () | 448623..448976 | + | 354 | WP_000753019.1 | head-tail joining protein | - |
| ND02_RS02320 () | 448988..449566 | + | 579 | WP_024025847.1 | phage tail protein | - |
| ND02_RS02325 () | 449563..449958 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| ND02_RS02330 () | 449966..450718 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| ND02_RS02335 () | 450732..451154 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| ND02_RS02340 () | 451181..451594 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| ND02_RS02345 () | 451575..454187 | + | 2613 | WP_032212771.1 | phage tail tape measure protein | - |
| ND02_RS02350 () | 454184..454513 | + | 330 | WP_000847401.1 | phage tail protein | - |
| ND02_RS02355 () | 454513..455211 | + | 699 | WP_001299882.1 | phage minor tail protein L | - |
| ND02_RS02360 () | 455217..455960 | + | 744 | WP_001370115.1 | C40 family peptidase | - |
| ND02_RS02365 () | 455906..456541 | + | 636 | WP_077696211.1 | tail assembly protein | - |
| ND02_RS02370 () | 456777..460169 | + | 3393 | WP_106902971.1 | host specificity protein J | - |
| ND02_RS02375 () | 460236..460835 | + | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| ND02_RS02380 () | 460900..462213 | + | 1314 | WP_032212803.1 | ISNCY family transposase KIS | Transposase |
| ND02_RS02385 () | 462215..462478 | + | 264 | WP_024174195.1 | phage tail fiber C-terminal domain-containing protein | - |
| ND02_RS02390 () | 462484..463697 | + | 1214 | WP_164502361.1 | IS3 family transposase IS629 | Transposase |
| ND02_RS02395 () | 463681..463797 | + | 117 | WP_001370118.1 | phage tail fiber C-terminal domain-containing protein | - |
| ND02_RS02405 () | 463938..464814 | + | 877 | Protein_424 | hypothetical protein | VF |
| ND02_RS29210 () | 465039..465689 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| ND02_RS02420 () | 465693..465953 | - | 261 | Protein_426 | hypothetical protein | - |
| ND02_RS02430 () | 467550..467798 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| ND02_RS02435 () | 467860..468957 | - | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ND02_RS02440 () | 469046..470083 | + | 1038 | WP_000543822.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| ND02_RS02445 () | 470217..470459 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| ND02_RS02450 () | 470625..471608 | - | 984 | Protein_432 | quinone oxidoreductase | - |
| ND02_RS02455 () | 471691..473106 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| ND02_RS02460 () | 473159..474238 | + | 1080 | WP_001147328.1 | alanine racemase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|