MGE detailed information
MGE type: Genomic_island MGE length: 15426 bp
Accession: NZ_CP027430 Location: 4542773..4558198 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Accession: NZ_CP027430 Location: 4542773..4558198 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P57_RS23505 () | 4537948..4538238 | - | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| C6P57_RS23510 () | 4538262..4539137 | - | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| C6P57_RS23515 () | 4539164..4540186 | - | 1023 | WP_000172488.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| C6P57_RS23520 () | 4540198..4540974 | - | 777 | Protein_4279 | histidine kinase | - |
| C6P57_RS23525 () | 4540970..4542550 | + | 1581 | Protein_4280 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C6P57_RS23530 () | 4542773..4543039 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| C6P57_RS23535 () | 4543039..4544361 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| C6P57_RS23545 () | 4544733..4545215 | + | 483 | WP_000931227.1 | Type-1 fimbrial protein, A chain | VF |
| C6P57_RS23550 () | 4545576..4546286 | + | 711 | Protein_4284 | Chaperone protein FocC | VF |
| C6P57_RS24115 () | 4546328..4548978 | + | 2651 | Protein_4285 | fimbrial biogenesis outer membrane usher protein | - |
| C6P57_RS23570 () | 4548992..4549522 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| C6P57_RS23575 () | 4549535..4550038 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| C6P57_RS23580 () | 4550097..4551011 | + | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| C6P57_RS23585 () | 4551345..4553624 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| C6P57_RS23590 () | 4553872..4554069 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| C6P57_RS23595 () | 4554144..4554905 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| C6P57_RS23600 () | 4555307..4556989 | + | 1683 | WP_001318307.1 | sulfatase | - |
| C6P57_RS23605 () | 4557041..4558198 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| C6P57_RS24020 () | 4558164..4558286 | - | 123 | WP_120795387.1 | protein YneP | - |
| C6P57_RS23610 () | 4558489..4560174 | + | 1686 | WP_105929218.1 | ABC transporter ATP-binding protein/permease | - |
| C6P57_RS23615 () | 4560212..4562584 | + | 2373 | WP_000832450.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.009 |