MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 140078 bp
Accession: NZ_CP027394 Location: 2104866..2244943 Organism: Escherichia coli O104:H4 strain FDAARGOS_349 Replicon: chromosome
Accession: NZ_CP027394 Location: 2104866..2244943 Organism: Escherichia coli O104:H4 strain FDAARGOS_349 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ27_RS11785 () | 2100542..2101522 | + | 981 | WP_001273465.1 | ATP-binding protein | - |
| CEQ27_RS11790 () | 2101532..2103919 | + | 2388 | WP_000126413.1 | S8 family peptidase | - |
| CEQ27_RS11795 () | 2103929..2105557 | + | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| CEQ27_RS11800 () | 2105560..2108430 | + | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| CEQ27_RS11805 () | 2108519..2108812 | + | 294 | WP_001091149.1 | hypothetical protein | - |
| CEQ27_RS11810 () | 2108882..2109139 | + | 258 | Protein_2047 | IS3 family transposase IS911 | Transposase |
| CEQ27_RS11815 () | 2109152..2110303 | - | 1152 | WP_001254936.1 | IS30 family transposase IS30D | Transposase |
| CEQ27_RS11820 () | 2110368..2110793 | + | 426 | Protein_2049 | IS3 family transposase | - |
| CEQ27_RS11830 () | 2111466..2112974 | + | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| CEQ27_RS11835 () | 2113064..2113537 | + | 474 | Protein_2051 | IS3 family transposase IS629 | Transposase |
| CEQ27_RS11845 () | 2113702..2117818 | + | 4117 | Protein_2052 | serine protease autotransporter toxin Pic | - |
| CEQ27_RS11850 () | 2117969..2118211 | - | 243 | Protein_2053 | IS256 family transposase IS1414 | Transposase |
| CEQ27_RS11855 () | 2118250..2118702 | - | 453 | Protein_2054 | IS66 family transposase ISEc8 | Transposase |
| CEQ27_RS11860 () | 2118790..2119224 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CEQ27_RS11865 () | 2119221..2119570 | + | 350 | Protein_2056 | IS66 family transposase ISEc47 | Transposase |
| CEQ27_RS11870 () | 2119601..2121214 | + | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| CEQ27_RS11875 () | 2121400..2121543 | - | 144 | Protein_2058 | integrase core domain-containing protein | - |
| CEQ27_RS11880 () | 2121547..2121909 | - | 363 | WP_077577697.1 | IS3 family transposase | - |
| CEQ27_RS11885 () | 2121949..2123082 | - | 1134 | WP_000555380.1 | IS110 family transposase ISEc45 | Transposase |
| CEQ27_RS11890 () | 2123143..2123331 | + | 189 | Protein_2061 | IS66 family transposase IS682 | Transposase |
| CEQ27_RS11895 () | 2123361..2123531 | + | 171 | Protein_2062 | ATP-dependent helicase | - |
| CEQ27_RS11905 () | 2124397..2125551 | - | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| CEQ27_RS11910 () | 2125685..2125965 | - | 281 | Protein_2064 | transposase | - |
| CEQ27_RS29945 () | 2126030..2126596 | - | 567 | WP_000587872.1 | hypothetical protein | - |
| CEQ27_RS11935 () | 2128354..2128827 | - | 474 | Protein_2066 | IS3 family transposase IS629 | Transposase |
| CEQ27_RS11940 () | 2128917..2130425 | - | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| CEQ27_RS11950 () | 2131098..2131835 | - | 738 | Protein_2068 | IS3 family transposase IS1203 | Transposase |
| CEQ27_RS11955 () | 2132032..2134581 | - | 2550 | WP_000029846.1 | Protein ClpV1 | VF |
| CEQ27_RS11960 () | 2134585..2137989 | - | 3405 | WP_000914956.1 | type VI secretion protein | - |
| CEQ27_RS11965 () | 2137995..2138585 | - | 591 | WP_001028113.1 | hypothetical protein | VF |
| CEQ27_RS11975 () | 2138924..2140336 | - | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| CEQ27_RS11980 () | 2140355..2140906 | - | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| CEQ27_RS11985 () | 2140914..2141990 | - | 1077 | WP_001033155.1 | hypothetical protein | VF |
| CEQ27_RS11990 () | 2141994..2142293 | - | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| CEQ27_RS11995 () | 2142303..2142770 | - | 468 | WP_000005080.1 | hypothetical protein | - |
| CEQ27_RS12000 () | 2142781..2144763 | - | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| CEQ27_RS12005 () | 2144776..2145708 | - | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| CEQ27_RS12010 () | 2145699..2147501 | - | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| CEQ27_RS12015 () | 2147494..2147916 | - | 423 | WP_000555547.1 | hypothetical protein | - |
| CEQ27_RS12020 () | 2147926..2148432 | - | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| CEQ27_RS12025 () | 2148442..2149920 | - | 1479 | WP_000215053.1 | hypothetical protein | VF |
| CEQ27_RS12030 () | 2149923..2150399 | - | 477 | WP_000072549.1 | hypothetical protein | VF |
| CEQ27_RS12035 () | 2150795..2151811 | + | 1017 | Protein_2084 | IS630 family transposase | - |
| CEQ27_RS12040 () | 2151817..2151942 | - | 126 | WP_001420591.1 | hypothetical protein | - |
| CEQ27_RS12045 () | 2151920..2152306 | - | 387 | WP_014966195.1 | hypothetical protein | - |
| CEQ27_RS12055 () | 2152516..2153095 | + | 580 | Protein_2087 | transposase | - |
| CEQ27_RS12060 () | 2153126..2153449 | - | 324 | WP_001387054.1 | hypothetical protein | - |
| CEQ27_RS12065 () | 2153515..2154159 | - | 645 | WP_001387055.1 | hypothetical protein | - |
| CEQ27_RS12070 () | 2154180..2154449 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| CEQ27_RS12075 () | 2154528..2154695 | - | 168 | Protein_2091 | transcriptional regulator | - |
| CEQ27_RS12080 () | 2154810..2155115 | - | 306 | WP_001420595.1 | hypothetical protein | - |
| CEQ27_RS12085 () | 2155180..2156925 | - | 1746 | WP_001390303.1 | AAA family ATPase | - |
| CEQ27_RS12090 () | 2157161..2158405 | - | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| CEQ27_RS12095 () | 2158507..2159868 | - | 1362 | WP_000930193.1 | hypothetical protein | VF |
| CEQ27_RS12100 () | 2159890..2160387 | - | 498 | WP_000098939.1 | hypothetical protein | VF |
| CEQ27_RS12105 () | 2160894..2161085 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| CEQ27_RS12110 () | 2161138..2161371 | - | 234 | WP_000124181.1 | hypothetical protein | - |
| CEQ27_RS12115 () | 2161467..2162090 | - | 624 | WP_001260266.1 | hypothetical protein | - |
| CEQ27_RS12120 () | 2162211..2162393 | - | 183 | WP_001216313.1 | hypothetical protein | - |
| CEQ27_RS12125 () | 2162399..2162818 | - | 420 | WP_001387059.1 | hypothetical protein | - |
| CEQ27_RS12130 () | 2162808..2163191 | - | 384 | WP_000271022.1 | hypothetical protein | - |
| CEQ27_RS29950 () | 2163163..2163321 | - | 159 | WP_000493525.1 | hypothetical protein | - |
| CEQ27_RS12135 () | 2163359..2163928 | - | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| CEQ27_RS29955 () | 2164132..2164305 | + | 174 | WP_001387062.1 | hypothetical protein | - |
| CEQ27_RS12145 () | 2164545..2164757 | - | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| CEQ27_RS12150 () | 2165456..2165662 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| CEQ27_RS12155 () | 2165748..2166320 | + | 573 | WP_001170560.1 | hypothetical protein | - |
| CEQ27_RS12165 () | 2166529..2166636 | + | 108 | Protein_2109 | IS1 family transposase | - |
| CEQ27_RS12180 () | 2167815..2168834 | + | 1020 | WP_001388379.1 | hypothetical protein | - |
| CEQ27_RS12185 () | 2168944..2169816 | + | 873 | WP_001069724.1 | GTPase family protein | - |
| CEQ27_RS12190 () | 2170150..2173269 | + | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| CEQ27_RS12195 () | 2173390..2175906 | + | 2517 | WP_001387066.1 | membrane protein | - |
| CEQ27_RS12200 () | 2175982..2176437 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| CEQ27_RS12205 () | 2176516..2176749 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| CEQ27_RS12215 () | 2176849..2177667 | + | 819 | WP_001234603.1 | DUF945 domain-containing protein | - |
| CEQ27_RS12225 () | 2177969..2178442 | + | 474 | WP_000855081.1 | antirestriction protein | - |
| CEQ27_RS12230 () | 2178458..2178934 | + | 477 | WP_001388380.1 | RadC family protein | - |
| CEQ27_RS12235 () | 2179021..2179242 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CEQ27_RS12240 () | 2179322..2179699 | + | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CEQ27_RS12245 () | 2179746..2180123 | + | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| CEQ27_RS12250 () | 2180120..2180317 | + | 198 | Protein_2122 | hypothetical protein | - |
| CEQ27_RS12255 () | 2180345..2180542 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| CEQ27_RS12260 () | 2180627..2181469 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| CEQ27_RS12265 () | 2181750..2182286 | - | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| CEQ27_RS12270 () | 2182288..2183466 | - | 1179 | WP_000094962.1 | Type II secretion system protein L | VF |
| CEQ27_RS12275 () | 2183463..2184440 | - | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| CEQ27_RS12280 () | 2184443..2185042 | - | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| CEQ27_RS12285 () | 2185039..2185410 | - | 372 | WP_000820125.1 | Type II secretion system protein I | VF |
| CEQ27_RS12290 () | 2185407..2185970 | - | 564 | WP_001115140.1 | Type II secretion system protein H | VF |
| CEQ27_RS12295 () | 2185974..2186429 | - | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| CEQ27_RS12300 () | 2186446..2187669 | - | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| CEQ27_RS12305 () | 2187669..2189162 | - | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| CEQ27_RS12310 () | 2189162..2191222 | - | 2061 | WP_000498829.1 | Type II secretion system protein D | VF |
| CEQ27_RS12315 () | 2191252..2192211 | - | 960 | WP_000135063.1 | Type II secretion system protein C | VF |
| CEQ27_RS12320 () | 2192229..2192639 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| CEQ27_RS12325 () | 2192705..2193514 | - | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| CEQ27_RS12330 () | 2193654..2198219 | - | 4566 | WP_001034494.1 | hypothetical protein | VF |
| CEQ27_RS12340 () | 2198705..2200387 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| CEQ27_RS12345 () | 2200743..2202914 | - | 2172 | WP_000084080.1 | malate synthase G | - |
| CEQ27_RS12350 () | 2202936..2203340 | - | 405 | WP_000853256.1 | protein GlcG | - |
| CEQ27_RS12355 () | 2203345..2204568 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| CEQ27_RS12360 () | 2204579..2205631 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| CEQ27_RS12365 () | 2205631..2207130 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CEQ27_RS12370 () | 2207381..2208145 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CEQ27_RS12375 () | 2208152..2209294 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| CEQ27_RS12385 () | 2209665..2211386 | + | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| CEQ27_RS12390 () | 2211383..2212297 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CEQ27_RS12395 () | 2212329..2212577 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| CEQ27_RS12400 () | 2212577..2213749 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| CEQ27_RS12405 () | 2213784..2214863 | - | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| CEQ27_RS12410 () | 2214860..2215930 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| CEQ27_RS12415 () | 2215961..2216521 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| CEQ27_RS12420 () | 2216533..2217357 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| CEQ27_RS12425 () | 2217357..2218706 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| CEQ27_RS12430 () | 2218752..2219510 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| CEQ27_RS12435 () | 2219542..2220255 | - | 714 | WP_001076097.1 | thymidylate kinase | - |
| CEQ27_RS12440 () | 2220429..2221121 | + | 693 | WP_001190780.1 | thymidylate kinase | - |
| CEQ27_RS12445 () | 2221170..2222669 | - | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| CEQ27_RS12450 () | 2222961..2224820 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CEQ27_RS12455 () | 2225025..2225891 | + | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| CEQ27_RS12465 () | 2226191..2227171 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| CEQ27_RS12470 () | 2227293..2227541 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| CEQ27_RS12475 () | 2227554..2227895 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CEQ27_RS12480 () | 2227888..2228376 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| CEQ27_RS12485 () | 2228369..2228863 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| CEQ27_RS12490 () | 2228863..2230566 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| CEQ27_RS12495 () | 2230563..2231741 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| CEQ27_RS12500 () | 2231731..2232717 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| CEQ27_RS12505 () | 2232720..2233838 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| CEQ27_RS12515 () | 2234027..2234314 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| CEQ27_RS12520 () | 2234433..2235320 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| CEQ27_RS12525 () | 2235477..2236517 | + | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| CEQ27_RS12530 () | 2236557..2237051 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| CEQ27_RS12535 () | 2237242..2238126 | + | 885 | WP_000018758.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CEQ27_RS12540 () | 2238165..2238590 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| CEQ27_RS12545 () | 2238597..2239331 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| CEQ27_RS12555 () | 2239583..2240770 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| CEQ27_RS12560 () | 2240910..2241569 | + | 660 | WP_000268419.1 | DedA family protein | - |
| CEQ27_RS12565 () | 2241609..2242508 | - | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| CEQ27_RS12570 () | 2242702..2243865 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| CEQ27_RS12575 () | 2243970..2244797 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| CEQ27_RS12580 () | 2244997..2245923 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| CEQ27_RS12585 () | 2245974..2246231 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| CEQ27_RS12590 () | 2246274..2248493 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|