MGE detailed information
MGE type: Genomic_island MGE length: 66836 bp
Accession: NZ_CP027387 Location: 1480321..1547156 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Accession: NZ_CP027387 Location: 1480321..1547156 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P73_RS08075 () | 1476416..1476991 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| C6P73_RS08085 () | 1477371..1478636 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C6P73_RS08090 () | 1478753..1480324 | - | 1572 | WP_000704132.1 | IS66 family transposase | - |
| C6P73_RS08095 () | 1480321..1481940 | - | 1620 | WP_001375513.1 | ISL3-like element ISEc38 family transposase | - |
| C6P73_RS08100 () | 1482036..1482815 | + | 780 | Protein_1423 | IS4 family transposase | - |
| C6P73_RS08110 () | 1483603..1485252 | + | 1650 | WP_001121617.1 | type III secretion system effector EspL2 | - |
| C6P73_RS08115 () | 1485470..1485619 | + | 150 | Protein_1425 | IS1 family transposase | - |
| C6P73_RS08120 () | 1485860..1486849 | + | 990 | WP_000953025.1 | type III secretion system effector arginine glycosyltransferase NleB | - |
| C6P73_RS08125 () | 1486898..1487572 | + | 675 | WP_000609742.1 | type III secretion system effector cysteine methyltransferase NleE | - |
| C6P73_RS08130 () | 1487908..1488849 | + | 942 | Protein_1428 | IS630 family transposase | - |
| C6P73_RS08135 () | 1489450..1497867 | + | 8418 | Protein_1429 | lymphostatin Efa1/LifA | - |
| C6P73_RS08140 () | 1497923..1499136 | + | 1214 | WP_162830411.1 | IS3 family transposase | - |
| C6P73_RS08150 () | 1499145..1500434 | + | 1290 | WP_199851083.1 | DUF3491 domain-containing protein | - |
| C6P73_RS08155 () | 1500606..1500956 | + | 351 | Protein_1432 | transposase | - |
| C6P73_RS08160 () | 1501369..1501992 | - | 624 | WP_001443729.1 | type III secretion system LEE effector EspF | - |
| C6P73_RS08165 () | 1502208..1502486 | - | 279 | WP_000245867.1 | EscG/YscG/SsaH family type III secretion system needle protein co-chaperone | - |
| C6P73_RS08170 () | 1502492..1502713 | - | 222 | WP_001053840.1 | type III secretion system LEE needle filament protein EscF | - |
| C6P73_RS08175 () | 1502750..1503157 | - | 408 | WP_000228587.1 | LcrR family type III secretion system chaperone CesD2 | - |
| C6P73_RS08180 () | 1503164..1504108 | - | 945 | WP_001092012.1 | type III secretion system LEE translocon pore-forming subunit EspB | - |
| C6P73_RS08185 () | 1504129..1505271 | - | 1143 | WP_000935768.1 | type III secretion system translocon subunit SctE | - |
| C6P73_RS08190 () | 1505284..1505862 | - | 579 | WP_000381555.1 | type III secretion system LEE translocon filament protein EspA | - |
| C6P73_RS08195 () | 1505920..1506975 | - | 1056 | WP_001273459.1 | type III secretion system LEE gatekeeper SepL | - |
| C6P73_RS08200 () | 1507118..1508338 | + | 1221 | WP_000953242.1 | type III secretion system LEE inner membrane ring protein EscD | - |
| C6P73_RS08205 () | 1508553..1511372 | - | 2820 | WP_000627895.1 | intimin type beta | - |
| C6P73_RS08210 () | 1511433..1511903 | - | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| C6P73_RS08215 () | 1512036..1513652 | - | 1617 | WP_001121330.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| C6P73_RS08220 () | 1514099..1514710 | - | 612 | WP_000492643.1 | hypothetical protein | - |
| C6P73_RS08225 () | 1514961..1515320 | + | 360 | WP_001005230.1 | Tir chaperone family protein | - |
| C6P73_RS08230 () | 1515539..1516054 | - | 516 | WP_001360071.1 | hypothetical protein | - |
| C6P73_RS08235 () | 1516085..1517002 | - | 918 | WP_001050796.1 | type III secretion system protein SepQ | - |
| C6P73_RS08240 () | 1516965..1517381 | - | 417 | WP_001443671.1 | DUF1106 domain-containing protein | - |
| C6P73_RS08245 () | 1517374..1517694 | - | 321 | WP_001062953.1 | hypothetical protein | - |
| C6P73_RS08250 () | 1517754..1519094 | - | 1341 | WP_000599710.1 | type III secretion system LEE ATPase EscN | - |
| C6P73_RS08255 () | 1519078..1521105 | - | 2028 | WP_001037820.1 | type III secretion system LEE export apparatus protein EscV | - |
| C6P73_RS08260 () | 1521102..1521455 | - | 354 | WP_001050414.1 | type III secretion system LEE chaperone CesL | - |
| C6P73_RS08265 () | 1521639..1521941 | + | 303 | WP_000338348.1 | SepZ/EspZ family type III secretion system protein | - |
| C6P73_RS08270 () | 1522025..1522402 | + | 378 | WP_001059795.1 | type III secretion system inner rod subunit SctI | - |
| C6P73_RS08275 () | 1522404..1522976 | + | 573 | WP_001233824.1 | type III secretion system LEE inner membrane ring protein EscJ | - |
| C6P73_RS08280 () | 1522982..1523437 | + | 456 | WP_001063688.1 | hypothetical protein | - |
| C6P73_RS08285 () | 1523437..1524975 | + | 1539 | WP_000723928.1 | type III secretion system LEE outer membrane ring protein EscC | - |
| C6P73_RS08290 () | 1524989..1525444 | + | 456 | WP_000087469.1 | SycD/LcrH family type III secretion system chaperone CesD | - |
| C6P73_RS08295 () | 1525830..1526243 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| C6P73_RS08300 () | 1526318..1526674 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| C6P73_RS08305 () | 1526871..1527329 | + | 459 | WP_001342442.1 | type III secretion system LEE muramidase EtgA | - |
| C6P73_RS08310 () | 1527326..1528363 | - | 1038 | WP_001291687.1 | type III secretion system LEE export apparatus switch protein EscU | - |
| C6P73_RS08315 () | 1528356..1529132 | - | 777 | WP_001002808.1 | type III secretion system LEE export apparatus protein EscT | - |
| C6P73_RS08320 () | 1529132..1529401 | - | 270 | WP_000447503.1 | type III secretion system LEE export apparatus protein EscS | - |
| C6P73_RS08325 () | 1529401..1530054 | - | 654 | WP_001299990.1 | type III secretion system LEE export apparatus protein EscR | - |
| C6P73_RS08330 () | 1530059..1530712 | - | 654 | WP_000780743.1 | hypothetical protein | - |
| C6P73_RS08335 () | 1530699..1531298 | - | 600 | WP_000153999.1 | hypothetical protein | - |
| C6P73_RS08340 () | 1531295..1531609 | - | 315 | WP_000084152.1 | type III secretion system filament chaperone | - |
| C6P73_RS08345 () | 1531622..1531840 | - | 219 | WP_000628726.1 | YscE family type III secretion system co-chaperone EscE | - |
| C6P73_RS08350 () | 1531855..1532226 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| C6P73_RS08355 () | 1533434..1534579 | + | 1146 | WP_000606968.1 | hypothetical protein | - |
| C6P73_RS08360 () | 1534726..1535544 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| C6P73_RS08365 () | 1535750..1536325 | + | 576 | Protein_1474 | secretion protein EspS | - |
| C6P73_RS08375 () | 1536372..1536922 | + | 551 | Protein_1475 | transposase | - |
| C6P73_RS08380 () | 1536907..1537056 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| C6P73_RS08390 () | 1537805..1539343 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C6P73_RS08400 () | 1539709..1541043 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C6P73_RS08405 () | 1541123..1543270 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C6P73_RS08410 () | 1543329..1544786 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| C6P73_RS08415 () | 1545023..1546540 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C6P73_RS08420 () | 1546659..1546832 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C6P73_RS08425 () | 1546860..1547156 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C6P73_RS08435 () | 1547383..1547655 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C6P73_RS08440 () | 1547667..1547897 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C6P73_RS08445 () | 1548078..1549709 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| C6P73_RS08450 () | 1549706..1550425 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|