MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 172293 bp
Accession: NZ_CP027373 Location: 3269348..3441640 Organism: Escherichia coli strain 05-3629 Replicon: chromosome
Accession: NZ_CP027373 Location: 3269348..3441640 Organism: Escherichia coli strain 05-3629 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P66_RS16945 () | 3267492..3268790 | + | 1299 | WP_000841103.1 | alpha-ketoglutarate permease | - |
| C6P66_RS16950 () | 3268787..3269110 | - | 324 | WP_001300818.1 | YfiM family lipoprotein | - |
| C6P66_RS16955 () | 3269156..3270511 | - | 1356 | WP_000949265.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| C6P66_RS27265 () | 3270495..3270536 | - | 42 | WP_211180504.1 | protein PssL | - |
| C6P66_RS16960 () | 3270625..3273285 | - | 2661 | WP_000082949.1 | protein lysine acetyltransferase | - |
| C6P66_RS16965 () | 3273317..3274015 | - | 699 | WP_001343689.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| C6P66_RS16970 () | 3274084..3274503 | - | 420 | WP_001098726.1 | thioredoxin TrxC | - |
| C6P66_RS16980 () | 3274710..3275747 | + | 1038 | WP_097447595.1 | tRNA/rRNA methyltransferase | - |
| C6P66_RS16985 () | 3275795..3276484 | - | 690 | WP_001262716.1 | uracil-DNA glycosylase | - |
| C6P66_RS16990 () | 3276789..3277172 | + | 384 | WP_000627804.1 | autonomous glycyl radical cofactor GrcA | - |
| C6P66_RS16995 () | 3277228..3277815 | - | 588 | WP_000189207.1 | cysteine/O-acetylserine transporter | - |
| C6P66_RS17000 () | 3277918..3278799 | + | 882 | WP_024251376.1 | LysR family transcriptional regulator | - |
| C6P66_RS17005 () | 3279036..3280016 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| C6P66_RS17015 () | 3280287..3281621 | - | 1335 | WP_000219193.1 | ATP-dependent RNA helicase SrmB | - |
| C6P66_RS17020 () | 3281753..3282490 | + | 738 | WP_040090074.1 | tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN | - |
| C6P66_RS17025 () | 3282475..3284097 | - | 1623 | WP_001094499.1 | L-aspartate oxidase | - |
| C6P66_RS26965 () | 3284353..3284508 | + | 156 | WP_001303621.1 | rpoE leader peptide RseD | - |
| C6P66_RS17030 () | 3284505..3285080 | + | 576 | WP_001295364.1 | ECF RNA polymerase sigma-E factor | VF |
| C6P66_RS17035 () | 3285113..3285763 | + | 651 | WP_001168459.1 | Anti-sigma-E factor RseA | VF |
| C6P66_RS17040 () | 3285763..3286719 | + | 957 | WP_032218405.1 | Sigma-E factor regulatory protein RseB | VF |
| C6P66_RS17045 () | 3286716..3287195 | + | 480 | WP_000589068.1 | Protein RseC | VF |
| C6P66_RS17050 () | 3287393..3289192 | + | 1800 | WP_000790168.1 | translation elongation factor 4 | - |
| C6P66_RS17055 () | 3289208..3290182 | + | 975 | WP_000002542.1 | signal peptidase I | - |
| C6P66_RS17065 () | 3290454..3291134 | + | 681 | WP_001068343.1 | ribonuclease III | - |
| C6P66_RS17070 () | 3291131..3292036 | + | 906 | WP_000020737.1 | GTPase Era | - |
| C6P66_RS17075 () | 3292048..3292776 | + | 729 | WP_000399393.1 | DNA repair protein RecO | - |
| C6P66_RS17080 () | 3292788..3293519 | + | 732 | WP_001297412.1 | Pyridoxine 5'-phosphate synthase | VF |
| C6P66_RS17085 () | 3293519..3293899 | + | 381 | WP_000986029.1 | holo-ACP synthase | - |
| - () | 3293920..3293996 | - | 77 | NuclAT_11 | - | - |
| - () | 3293920..3293996 | - | 77 | NuclAT_11 | - | - |
| - () | 3293920..3293996 | - | 77 | NuclAT_11 | - | - |
| - () | 3293920..3293996 | - | 77 | NuclAT_11 | - | - |
| C6P66_RS17100 () | 3294319..3294399 | + | 81 | WP_000128776.1 | type I toxin-antitoxin system toxin ShoB | - |
| C6P66_RS17105 () | 3294593..3294853 | - | 261 | WP_001196283.1 | 4Fe-4S dicluster ferredoxin YfhL | - |
| C6P66_RS17110 () | 3294909..3295757 | - | 849 | WP_001013779.1 | MurR/RpiR family transcriptional regulator | - |
| C6P66_RS17115 () | 3295966..3296601 | + | 636 | WP_000190658.1 | phosphatidylglycerophosphatase C | - |
| C6P66_RS17120 () | 3296659..3297162 | + | 504 | WP_001299509.1 | tRNA adenosine(34) deaminase TadA | - |
| C6P66_RS17125 () | 3297159..3298715 | - | 1557 | WP_000734212.1 | membrane-bound lytic murein transglycosylase MltF | - |
| C6P66_RS17135 () | 3298973..3302860 | + | 3888 | WP_106916267.1 | phosphoribosylformylglycinamidine synthase | - |
| C6P66_RS17140 () | 3303436..3304863 | + | 1428 | WP_001297612.1 | two component system sensor histidine kinase QseE/GlrK | - |
| C6P66_RS17145 () | 3305028..3305741 | + | 714 | WP_001215855.1 | two-component system QseEF-associated lipoprotein QseG | - |
| C6P66_RS17150 () | 3305731..3307065 | + | 1335 | WP_001298983.1 | Transcriptional regulatory protein GlrR | VF |
| C6P66_RS17155 () | 3307126..3307464 | + | 339 | WP_000717694.1 | nitrogen regulatory protein P-II | - |
| C6P66_RS17160 () | 3307509..3308699 | - | 1191 | WP_000883122.1 | NO-inducible flavohemoprotein | - |
| C6P66_RS17165 () | 3309027..3310280 | + | 1254 | WP_000919159.1 | serine hydroxymethyltransferase | - |
| C6P66_RS17170 () | 3310478..3311671 | - | 1194 | WP_001326366.1 | ROK family protein | - |
| C6P66_RS17175 () | 3311789..3315070 | + | 3282 | WP_001356306.1 | DUF5107 domain-containing protein | - |
| C6P66_RS17180 () | 3315167..3316150 | + | 984 | WP_001142420.1 | substrate-binding domain-containing protein | - |
| C6P66_RS17185 () | 3316173..3317684 | + | 1512 | WP_000493471.1 | sugar ABC transporter ATP-binding protein | - |
| C6P66_RS17190 () | 3317709..3318707 | + | 999 | WP_001276691.1 | ABC transporter permease | - |
| C6P66_RS17195 () | 3318740..3319834 | + | 1095 | WP_000700800.1 | zinc-binding dehydrogenase | - |
| C6P66_RS17200 () | 3319846..3320718 | + | 873 | WP_000158547.1 | aldose 1-epimerase | - |
| C6P66_RS17205 () | 3320766..3321188 | - | 423 | WP_001094726.1 | DoxX family protein | - |
| C6P66_RS17210 () | 3321285..3322487 | - | 1203 | WP_000660797.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| C6P66_RS17215 () | 3322497..3323309 | - | 813 | WP_001281377.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| C6P66_RS17220 () | 3323306..3323626 | - | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| C6P66_RS17225 () | 3323626..3324144 | - | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| C6P66_RS17230 () | 3324141..3325502 | - | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| C6P66_RS17235 () | 3325638..3326528 | + | 891 | WP_000423256.1 | DNA-binding transcriptional regulator HcaR | - |
| C6P66_RS17240 () | 3326688..3327827 | + | 1140 | WP_000244193.1 | 3-phenylpropionate MFS transporter | - |
| C6P66_RS17245 () | 3327819..3329099 | - | 1281 | WP_000983008.1 | stationary phase inducible protein CsiE | - |
| C6P66_RS17250 () | 3329290..3330144 | - | 855 | WP_001299515.1 | alpha/beta hydrolase | - |
| C6P66_RS17255 () | 3330289..3331092 | - | 804 | WP_000553451.1 | inositol-1-monophosphatase | - |
| C6P66_RS17260 () | 3331211..3331951 | + | 741 | WP_000940019.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| C6P66_RS17265 () | 3332221..3332709 | + | 489 | WP_001241357.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| C6P66_RS17270 () | 3332821..3334035 | + | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| C6P66_RS17275 () | 3334063..3334449 | + | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| C6P66_RS17280 () | 3334466..3334789 | + | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| C6P66_RS17285 () | 3334885..3335400 | + | 516 | WP_000384411.1 | co-chaperone HscB | - |
| C6P66_RS17290 () | 3335417..3337267 | + | 1851 | WP_001196613.1 | Fe-S protein assembly chaperone HscA | - |
| C6P66_RS17295 () | 3337269..3337604 | + | 336 | WP_001124469.1 | ISC system 2Fe-2S type ferredoxin | - |
| C6P66_RS17300 () | 3337616..3337816 | + | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| C6P66_RS17305 () | 3337994..3339277 | + | 1284 | WP_000133582.1 | aminopeptidase PepB | - |
| C6P66_RS17310 () | 3339419..3340195 | + | 777 | WP_001299505.1 | enhanced serine sensitivity protein SseB | - |
| C6P66_RS17315 () | 3340688..3341533 | - | 846 | WP_000108626.1 | 3-mercaptopyruvate sulfurtransferase | - |
| C6P66_RS17320 () | 3341740..3346701 | + | 4962 | WP_000736307.1 | alpha2-macroglobulin | - |
| C6P66_RS17325 () | 3346702..3349014 | + | 2313 | WP_001137682.1 | peptidoglycan glycosyltransferase PbpC | - |
| C6P66_RS17330 () | 3349163..3349594 | + | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| C6P66_RS17335 () | 3349744..3350898 | + | 1155 | WP_000003329.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| C6P66_RS17345 () | 3351183..3352196 | + | 1014 | WP_001090850.1 | cytoskeleton protein RodZ | - |
| C6P66_RS17350 () | 3352223..3353341 | + | 1119 | WP_000551807.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| C6P66_RS17355 () | 3353452..3354726 | + | 1275 | WP_001107167.1 | histidine--tRNA ligase | - |
| C6P66_RS17360 () | 3354744..3355364 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| C6P66_RS17365 () | 3355375..3356553 | + | 1179 | WP_001177037.1 | outer membrane protein assembly factor BamB | - |
| C6P66_RS17370 () | 3356671..3358143 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| C6P66_RS17375 () | 3358212..3358427 | + | 216 | WP_001341622.1 | zinc ribbon domain-containing protein | - |
| C6P66_RS17380 () | 3358424..3359794 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| C6P66_RS17385 () | 3359956..3361422 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| C6P66_RS17390 () | 3361491..3363068 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| C6P66_RS17395 () | 3363377..3364585 | + | 1209 | WP_032730911.1 | Prophage integrase IntA ; Integrase | Integrase |
| C6P66_RS17400 () | 3364867..3365097 | + | 231 | WP_000410046.1 | AlpA family phage regulatory protein | - |
| C6P66_RS17405 () | 3365101..3365967 | + | 867 | WP_096940375.1 | helicase RepA family protein | - |
| C6P66_RS17410 () | 3365954..3366853 | + | 900 | WP_106916269.1 | replication protein C | - |
| C6P66_RS17415 () | 3367376..3367696 | - | 321 | WP_032730906.1 | hypothetical protein | - |
| C6P66_RS17420 () | 3367699..3369303 | - | 1605 | WP_096940374.1 | P-type conjugative transfer protein TrbL | - |
| C6P66_RS17430 () | 3369497..3370291 | - | 795 | WP_032730902.1 | P-type conjugative transfer protein TrbJ | - |
| C6P66_RS17435 () | 3370561..3370785 | - | 225 | WP_016943284.1 | hypothetical protein | - |
| C6P66_RS17440 () | 3370788..3370997 | - | 210 | WP_000101767.1 | hypothetical protein | - |
| C6P66_RS17445 () | 3371471..3371851 | + | 381 | WP_096940372.1 | conjugal transfer protein TraJ | - |
| C6P66_RS17450 () | 3371848..3373800 | + | 1953 | WP_096940371.1 | relaxase/mobilization nuclease domain-containing protein | - |
| C6P66_RS17455 () | 3373944..3375665 | + | 1722 | WP_096940370.1 | AAA family ATPase | - |
| C6P66_RS17460 () | 3375872..3376057 | + | 186 | WP_096940369.1 | addiction module antidote protein | - |
| C6P66_RS17465 () | 3376398..3376994 | - | 597 | WP_096940368.1 | hypothetical protein | - |
| C6P66_RS17470 () | 3376996..3377970 | - | 975 | WP_096940367.1 | hypothetical protein | - |
| C6P66_RS26970 () | 3378177..3378347 | - | 171 | WP_157912450.1 | hypothetical protein | - |
| C6P66_RS17475 () | 3378670..3379209 | - | 540 | WP_000755173.1 | DUF5384 family protein | - |
| C6P66_RS17480 () | 3379225..3379743 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| C6P66_RS17490 () | 3380054..3380245 | - | 192 | WP_000076001.1 | DUF2633 family protein | - |
| C6P66_RS27140 () | 3380263..3380415 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| C6P66_RS17500 () | 3380597..3382840 | + | 2244 | WP_000772774.1 | Cyclic di-GMP phosphodiesterase PdeF | VF |
| C6P66_RS17505 () | 3382879..3384420 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| C6P66_RS17510 () | 3384425..3386491 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| C6P66_RS17515 () | 3386662..3387300 | - | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| C6P66_RS17520 () | 3387300..3388337 | - | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| C6P66_RS17530 () | 3388662..3389288 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| C6P66_RS17535 () | 3389374..3390663 | + | 1290 | WP_000198328.1 | uracil permease | - |
| C6P66_RS17540 () | 3390758..3391459 | + | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| C6P66_RS17545 () | 3391597..3391956 | - | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| C6P66_RS17550 () | 3391977..3393440 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| C6P66_RS17555 () | 3393653..3394714 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| C6P66_RS26975 () | 3394752..3394976 | - | 225 | WP_001330935.1 | formate/nitrite transporter family protein | - |
| C6P66_RS17565 () | 3394868..3395599 | - | 732 | WP_001244769.1 | formate transporter | - |
| C6P66_RS17570 () | 3395621..3397633 | - | 2013 | WP_001251558.1 | DNA-binding transcriptional activator HyfR | VF |
| C6P66_RS17575 () | 3397663..3398076 | - | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| C6P66_RS17580 () | 3398069..3398827 | - | 759 | WP_000075570.1 | hydrogenase 4 catalytic subunit HyfI | - |
| C6P66_RS17585 () | 3398824..3399363 | - | 540 | WP_000916082.1 | hydrogenase 4 subunit H | - |
| C6P66_RS17590 () | 3399373..3401088 | - | 1716 | WP_001102298.1 | hydrogenase 4 catalytic subunit HyfG | - |
| C6P66_RS17595 () | 3401078..3402658 | - | 1581 | WP_000122534.1 | hydrogenase 4 subunit F | - |
| C6P66_RS17600 () | 3402663..3403313 | - | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| C6P66_RS17605 () | 3403325..3404640 | - | 1316 | Protein_3185 | hydrogenase 4 subunit HyfD | - |
| C6P66_RS17610 () | 3404652..3404762 | - | 111 | WP_000429114.1 | hypothetical protein | - |
| C6P66_RS17615 () | 3404779..3405726 | - | 948 | WP_001358398.1 | hydrogenase 4 subunit HyfC | - |
| C6P66_RS17620 () | 3405737..3407754 | - | 2018 | Protein_3188 | hydrogenase 4 subunit B | - |
| C6P66_RS17625 () | 3407754..3408371 | - | 618 | WP_001352202.1 | hydrogenase 4 subunit HyfA | - |
| C6P66_RS17630 () | 3408624..3409094 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| C6P66_RS17635 () | 3409094..3409666 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| C6P66_RS17640 () | 3409812..3410690 | + | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| C6P66_RS17645 () | 3410707..3411741 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| C6P66_RS17650 () | 3411954..3412667 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| C6P66_RS17655 () | 3412821..3413048 | + | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C6P66_RS17660 () | 3413048..3413446 | + | 399 | WP_000911330.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C6P66_RS17665 () | 3413593..3414456 | + | 864 | WP_001267508.1 | neutral zinc metallopeptidase | - |
| C6P66_RS17670 () | 3414471..3416486 | + | 2016 | WP_000829329.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| C6P66_RS17675 () | 3416560..3417258 | + | 699 | WP_000679823.1 | esterase | - |
| C6P66_RS17680 () | 3417368..3417568 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| C6P66_RS17685 () | 3417596..3418723 | - | 1128 | WP_001277801.1 | succinyl-diaminopimelate desuccinylase | - |
| C6P66_RS17690 () | 3418727..3419083 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| C6P66_RS17695 () | 3419464..3419523 | + | 60 | WP_001386977.1 | protein YpfM | - |
| C6P66_RS17705 () | 3419622..3422735 | - | 3114 | WP_106916271.1 | Multidrug efflux pump subunit AcrB | VF |
| C6P66_RS17710 () | 3422899..3424599 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| C6P66_RS17715 () | 3424805..3426784 | + | 1980 | WP_001078875.1 | formate-dependent uric acid utilization protein AegA | - |
| C6P66_RS17720 () | 3426852..3427427 | + | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| C6P66_RS17725 () | 3427553..3428596 | + | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| C6P66_RS17730 () | 3428692..3430695 | - | 2004 | WP_057695358.1 | transketolase | - |
| C6P66_RS17735 () | 3430715..3431665 | - | 951 | WP_001003709.1 | transaldolase | - |
| C6P66_RS17740 () | 3431954..3434233 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| C6P66_RS17750 () | 3434526..3434861 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| C6P66_RS17755 () | 3434874..3435353 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| C6P66_RS17760 () | 3435328..3436029 | + | 702 | WP_000733906.1 | ethanolamine utilization acetate kinase EutQ | - |
| C6P66_RS17765 () | 3436026..3436829 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| C6P66_RS17770 () | 3436826..3437842 | + | 1017 | WP_000582978.1 | phosphate acetyltransferase | - |
| C6P66_RS17775 () | 3437881..3438174 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| C6P66_RS17780 () | 3438281..3438568 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| C6P66_RS17785 () | 3438580..3439983 | + | 1404 | WP_001075711.1 | Aldehyde-alcohol dehydrogenase | VF |
| C6P66_RS17790 () | 3439994..3440830 | + | 837 | WP_000929726.1 | ethanolamine utilization protein EutJ | - |
| C6P66_RS17795 () | 3440820..3442007 | + | 1188 | WP_001297322.1 | ethanolamine utilization ethanol dehydrogenase EutG | - |
| C6P66_RS17800 () | 3442124..3443350 | + | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| C6P66_RS17805 () | 3443347..3444750 | + | 1404 | WP_001097452.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| C6P66_RS17810 () | 3444762..3446123 | + | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|