MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 175427 bp
Accession: NZ_CP027372 Location: 1..175427 Organism: Escherichia coli strain 2015C-3905 Replicon: plasmid unnamed
Accession: NZ_CP027372 Location: 1..175427 Organism: Escherichia coli strain 2015C-3905 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P67_RS25340 () | 1..635 | - | 635 | WP_106879213.1 | DUF4942 domain-containing protein | - |
| C6P67_RS25355 () | 1214..1465 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6P67_RS25360 () | 1496..1729 | - | 234 | WP_001370006.1 | hypothetical protein | - |
| C6P67_RS25365 () | 1729..2655 | - | 927 | WP_000038346.1 | Recombination-promoting nuclease RpnA | VF |
| C6P67_RS25370 () | 2720..2986 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| C6P67_RS25375 () | 3079..3513 | - | 435 | WP_000218847.1 | hypothetical protein | - |
| C6P67_RS25385 () | 4245..4745 | - | 501 | WP_000117616.1 | antirestriction protein ArdA | - |
| C6P67_RS25395 () | 5210..5806 | - | 597 | WP_000978008.1 | hypothetical protein | - |
| C6P67_RS25400 () | 5803..6522 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6P67_RS25405 () | 6519..6953 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| C6P67_RS25410 () | 7008..8776 | - | 1769 | Protein_10 | ParB/RepB/Spo0J family partition protein | - |
| C6P67_RS25415 () | 8836..9069 | - | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| C6P67_RS25420 () | 9127..9660 | - | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| C6P67_RS26650 () | 10097..10450 | - | 354 | WP_001367791.1 | hypothetical protein | - |
| C6P67_RS25430 () | 10413..10604 | - | 192 | WP_001027507.1 | hypothetical protein | - |
| C6P67_RS25435 () | 10604..11023 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| C6P67_RS25440 () | 11070..11372 | - | 303 | WP_077776154.1 | antirestriction protein | - |
| C6P67_RS25455 () | 11909..12679 | - | 771 | WP_001006218.1 | hypothetical protein | - |
| C6P67_RS25460 () | 12724..13158 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C6P67_RS25465 () | 13172..13393 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C6P67_RS25470 () | 13394..14077 | - | 684 | WP_000086114.1 | DNA methylase | - |
| C6P67_RS25475 () | 14154..14466 | - | 313 | Protein_21 | hypothetical protein | - |
| C6P67_RS25480 () | 14463..15365 | - | 903 | WP_001373099.1 | DUF1281 domain-containing protein | - |
| C6P67_RS25490 () | 15784..16032 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6P67_RS25495 () | 16029..16481 | + | 453 | WP_000109075.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6P67_RS25500 () | 16465..17735 | + | 1271 | Protein_25 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6P67_RS25510 () | 17939..18565 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C6P67_RS26770 () | 18562..18864 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| C6P67_RS26775 () | 19293..19544 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| C6P67_RS25530 () | 19544..20134 | + | 591 | WP_000194580.1 | hypothetical protein | - |
| C6P67_RS25535 () | 20154..20501 | - | 348 | WP_000142449.1 | hypothetical protein | - |
| C6P67_RS25540 () | 20620..20967 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| C6P67_RS25545 () | 20985..22865 | - | 1881 | WP_001283354.1 | colicin | - |
| C6P67_RS25550 () | 23144..23809 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| C6P67_RS25555 () | 23832..24041 | - | 210 | Protein_34 | IS21 family transposase IS21 | Transposase |
| C6P67_RS25565 () | 24538..26510 | + | 1973 | Protein_35 | Hemin receptor | VF |
| C6P67_RS25570 () | 26529..27320 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C6P67_RS25580 () | 27838..28263 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS25585 () | 28260..28610 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS25590 () | 28641..30254 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS25595 () | 30365..30829 | + | 465 | WP_001373091.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS25600 () | 30781..31131 | + | 351 | WP_000950104.1 | IS66 family transposase IS682 | Transposase |
| C6P67_RS25605 () | 31162..32754 | + | 1593 | WP_000080210.1 | IS66 family transposase ISEc47 | Transposase |
| C6P67_RS25610 () | 32784..32957 | + | 174 | Protein_43 | DUF4113 domain-containing protein | - |
| C6P67_RS25615 () | 32959..33375 | - | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| C6P67_RS25620 () | 33368..34348 | - | 981 | WP_000688510.1 | plasmid segregation protein ParM | - |
| C6P67_RS25625 () | 34763..35071 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C6P67_RS25630 () | 35158..35802 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6P67_RS25635 () | 35982..36788 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| C6P67_RS25640 () | 36789..37094 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6P67_RS25645 () | 37096..37314 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6P67_RS25650 () | 37910..38170 | + | 261 | WP_000343100.1 | hypothetical protein | - |
| C6P67_RS25655 () | 38167..38757 | + | 591 | WP_033802802.1 | hypothetical protein | - |
| C6P67_RS25660 () | 38775..39122 | - | 348 | WP_000142427.1 | hypothetical protein | - |
| C6P67_RS25670 () | 39604..39975 | - | 372 | WP_106879214.1 | colicin | - |
| C6P67_RS25675 () | 40035..40766 | - | 732 | WP_000850414.1 | complement resistance protein TraT | - |
| C6P67_RS25685 () | 41038..41148 | - | 111 | Protein_56 | IS481 family transposase | - |
| C6P67_RS26780 () | 41152..41369 | - | 218 | Protein_57 | hypothetical protein | - |
| C6P67_RS25700 () | 41932..42909 | + | 978 | WP_011310114.1 | RepB family plasmid replication initiator protein | - |
| C6P67_RS25705 () | 43194..43906 | - | 713 | Protein_59 | tyrosine-type recombinase/integrase | - |
| C6P67_RS25710 () | 43970..45196 | - | 1227 | Protein_60 | ISL3 family transposase | - |
| C6P67_RS25715 () | 45350..45598 | - | 249 | WP_011310117.1 | hypothetical protein | - |
| C6P67_RS25725 () | 45728..46222 | - | 495 | WP_024173664.1 | Transcriptional repressor MprA | VF |
| C6P67_RS25730 () | 46343..47782 | - | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6P67_RS25735 () | 47786..49906 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6P67_RS25740 () | 49956..52952 | - | 2997 | WP_011310119.1 | Hemolysin, chromosomal | VF |
| C6P67_RS25745 () | 52954..53469 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6P67_RS25755 () | 53897..54700 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C6P67_RS25760 () | 54725..59020 | - | 4296 | WP_024173665.1 | Autotransporter adhesin SadA | VF |
| C6P67_RS25765 () | 59241..59525 | - | 285 | WP_000439678.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P67_RS25780 () | 60133..60680 | + | 548 | Protein_70 | transposase | - |
| C6P67_RS25790 () | 61010..61444 | + | 435 | Protein_71 | IS110 family transposase ISEc21 | Transposase |
| C6P67_RS25795 () | 61531..63068 | + | 1538 | Protein_72 | IS3 family transposase | - |
| C6P67_RS25800 () | 63173..63802 | + | 630 | Protein_73 | transposase | - |
| C6P67_RS25805 () | 63822..64170 | + | 349 | Protein_74 | integrase core domain-containing protein | - |
| C6P67_RS25810 () | 64535..66091 | + | 1557 | WP_000554411.1 | L-lactate permease | - |
| C6P67_RS25815 () | 66142..66861 | + | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| C6P67_RS25820 () | 66872..68287 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6P67_RS25825 () | 68292..68990 | + | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C6P67_RS25830 () | 69031..69267 | - | 237 | WP_001369996.1 | hypothetical protein | - |
| C6P67_RS25835 () | 69335..69799 | - | 465 | WP_077632745.1 | IS3 family transposase ISEcB1 | Transposase |
| C6P67_RS25840 () | 69915..70226 | - | 312 | WP_000203483.1 | hypothetical protein | - |
| C6P67_RS25845 () | 70254..70445 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C6P67_RS25850 () | 70455..70820 | - | 366 | WP_000997727.1 | hypothetical protein | - |
| C6P67_RS25860 () | 70954..71163 | + | 210 | WP_062896385.1 | hypothetical protein | - |
| C6P67_RS25865 () | 71326..75228 | - | 3903 | WP_001034104.1 | Serine protease EspP | VF |
| C6P67_RS25870 () | 75725..76111 | - | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C6P67_RS25875 () | 76270..76947 | + | 678 | WP_001158024.1 | hypothetical protein | - |
| C6P67_RS25890 () | 77437..77757 | - | 321 | WP_001373084.1 | hypothetical protein | - |
| C6P67_RS25895 () | 77815..78963 | - | 1149 | Protein_89 | IS3 family transposase | - |
| C6P67_RS26785 () | 79030..79119 | - | 90 | Protein_90 | transposase | - |
| C6P67_RS25900 () | 79373..80866 | + | 1494 | WP_077173497.1 | Adhesin YadA | VF |
| C6P67_RS25905 () | 81063..82166 | + | 1104 | Protein_92 | IS3 family transposase | - |
| C6P67_RS25915 () | 82474..84561 | + | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6P67_RS25920 () | 84822..85244 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C6P67_RS25925 () | 85579..85761 | - | 183 | Protein_95 | IS110 family transposase | - |
| C6P67_RS25930 () | 85823..86011 | + | 189 | Protein_96 | IS66 family transposase IS682 | Transposase |
| C6P67_RS25940 () | 86295..86720 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C6P67_RS25945 () | 86737..87780 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C6P67_RS25950 () | 87834..88798 | - | 965 | Protein_99 | transposase | - |
| C6P67_RS25955 () | 88829..89177 | - | 349 | Protein_100 | IS66 family transposase IS682 | Transposase |
| C6P67_RS25960 () | 89174..89599 | - | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| C6P67_RS25970 () | 89904..90089 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| C6P67_RS25975 () | 90089..91335 | - | 1247 | Protein_103 | VENN motif pre-toxin domain-containing protein | - |
| C6P67_RS25980 () | 91639..91812 | + | 174 | Protein_104 | Tn3 family transposase ISPsy39 | Transposase |
| C6P67_RS25985 () | 92009..93004 | + | 996 | Protein_105 | IS110 family transposase IS4321R | Transposase |
| C6P67_RS26655 () | 93281..93358 | - | 78 | Protein_106 | colicin V | - |
| C6P67_RS26660 () | 93336..93572 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C6P67_RS26790 () | 94239..94496 | - | 258 | WP_001373122.1 | hypothetical protein | - |
| C6P67_RS26005 () | 94582..95076 | - | 495 | WP_001373089.1 | DUF2569 domain-containing protein | - |
| C6P67_RS26010 () | 95165..95419 | - | 255 | Protein_110 | hypothetical protein | - |
| C6P67_RS26015 () | 95416..96035 | - | 620 | Protein_111 | adhesin | - |
| C6P67_RS26020 () | 96454..96636 | - | 183 | WP_000205441.1 | hypothetical protein | - |
| C6P67_RS26025 () | 96646..96948 | - | 303 | WP_001370014.1 | hypothetical protein | - |
| C6P67_RS26030 () | 96935..106420 | - | 9486 | WP_052904243.1 | tRNA nuclease CdiA | VF |
| C6P67_RS26035 () | 106433..108199 | - | 1767 | WP_033802720.1 | Hemolysin transporter protein ShlB | VF |
| C6P67_RS26045 () | 108814..109053 | - | 240 | WP_000859017.1 | MarR family transcriptional regulator | - |
| C6P67_RS26795 () | 109066..109326 | - | 261 | WP_001373073.1 | hypothetical protein | - |
| C6P67_RS26070 () | 110022..111053 | - | 1032 | WP_000907876.1 | hypothetical protein | - |
| C6P67_RS26085 () | 111755..112396 | + | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C6P67_RS26090 () | 112537..113202 | + | 666 | WP_000154144.1 | hypothetical protein | - |
| C6P67_RS26100 () | 113469..114089 | + | 621 | WP_000176499.1 | DUF1449 family protein | - |
| C6P67_RS26105 () | 114116..115810 | + | 1695 | WP_000482662.1 | flotillin family protein | - |
| C6P67_RS26110 () | 115816..116133 | + | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| C6P67_RS26120 () | 116742..117812 | + | 1071 | WP_001170190.1 | hypothetical protein | VF |
| C6P67_RS26125 () | 117817..118254 | + | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| C6P67_RS26130 () | 118285..119904 | + | 1620 | WP_001034995.1 | Outer membrane lipoprotein BfpB | VF |
| C6P67_RS26135 () | 119925..121220 | + | 1296 | WP_000129890.1 | type 4b pilus protein PilO2 | - |
| C6P67_RS26140 () | 121210..121662 | + | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| C6P67_RS26145 () | 121747..123255 | + | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C6P67_RS26150 () | 123257..124357 | + | 1101 | WP_000670140.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6P67_RS26155 () | 124431..124967 | + | 537 | WP_001011156.1 | cleavage protein | - |
| C6P67_RS26160 () | 125021..125494 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C6P67_RS26165 () | 125513..126148 | + | 636 | WP_000478595.1 | prepilin peptidase | - |
| C6P67_RS26170 () | 126153..127517 | + | 1365 | WP_001168070.1 | hypothetical protein | VF |
| C6P67_RS26185 () | 127975..128265 | + | 291 | WP_000681897.1 | hypothetical protein | - |
| C6P67_RS26190 () | 128357..128677 | - | 321 | WP_000695053.1 | hypothetical protein | - |
| C6P67_RS26195 () | 128937..129758 | + | 822 | WP_000804094.1 | hypothetical protein | - |
| C6P67_RS26200 () | 129848..131050 | + | 1203 | WP_000980152.1 | conjugal transfer protein TraF | - |
| C6P67_RS26205 () | 131409..131861 | + | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| C6P67_RS26210 () | 131858..132694 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C6P67_RS26215 () | 132678..133826 | + | 1149 | WP_106879215.1 | putative protein YggR | VF |
| C6P67_RS26220 () | 133823..134113 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C6P67_RS26225 () | 134177..138198 | + | 4022 | Protein_143 | DNA primase | - |
| C6P67_RS26230 () | 138215..138565 | + | 351 | WP_001056369.1 | hypothetical protein | - |
| C6P67_RS26235 () | 138577..139272 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C6P67_RS26240 () | 139283..140257 | + | 975 | WP_106879216.1 | hypothetical protein | VF |
| C6P67_RS26245 () | 140261..141592 | + | 1332 | WP_001272011.1 | conjugal transfer protein TraO | - |
| C6P67_RS26250 () | 141589..142302 | + | 714 | WP_000787009.1 | conjugal transfer protein TraP | - |
| C6P67_RS26255 () | 142302..142829 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| C6P67_RS26260 () | 142876..143274 | + | 399 | WP_000086066.1 | hypothetical protein | - |
| C6P67_RS26265 () | 143331..143582 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C6P67_RS26270 () | 143497..144315 | + | 819 | WP_072095383.1 | conjugal transfer protein TraT | - |
| C6P67_RS26275 () | 144370..144729 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| C6P67_RS26280 () | 144729..145109 | + | 381 | WP_000690884.1 | hypothetical protein | - |
| C6P67_RS26285 () | 145285..148329 | + | 3045 | WP_001024763.1 | hypothetical protein | - |
| C6P67_RS26290 () | 148329..148946 | + | 618 | WP_000286860.1 | hypothetical protein | - |
| C6P67_RS26295 () | 148907..150112 | + | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| C6P67_RS26300 () | 150109..150678 | + | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| C6P67_RS26305 () | 150751..152916 | + | 2166 | WP_000691798.1 | DotA/TraY family protein | - |
| C6P67_RS26310 () | 152987..153637 | + | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6P67_RS26315 () | 153911..155497 | + | 1587 | WP_000004559.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| C6P67_RS26320 () | 155635..155787 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6P67_RS26325 () | 156121..156363 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C6P67_RS26330 () | 156456..157991 | - | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| C6P67_RS26335 () | 158192..158647 | - | 456 | WP_001205142.1 | DUF2569 family protein | - |
| C6P67_RS26340 () | 158735..159358 | - | 624 | WP_001158022.1 | hypothetical protein | - |
| C6P67_RS26345 () | 159517..159930 | + | 414 | WP_000598952.1 | thermonuclease family protein | - |
| C6P67_RS26350 () | 160377..164456 | + | 4080 | WP_106879217.1 | Serine protease SepA autotransporter | VF |
| C6P67_RS26360 () | 164963..165328 | + | 366 | WP_000997722.1 | hypothetical protein | - |
| C6P67_RS26365 () | 165338..165529 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6P67_RS26370 () | 165557..165868 | + | 312 | WP_000203481.1 | hypothetical protein | - |
| C6P67_RS26385 () | 166615..167895 | + | 1281 | WP_000121922.1 | IncI1-type conjugal transfer protein TrbA | - |
| C6P67_RS26390 () | 167892..169010 | + | 1119 | WP_000155603.1 | DsbC family protein | - |
| C6P67_RS26395 () | 168991..171294 | + | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| C6P67_RS26400 () | 171420..171722 | + | 303 | WP_000334995.1 | hypothetical protein | - |
| C6P67_RS26405 () | 171820..172251 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| C6P67_RS26410 () | 172319..175030 | - | 2712 | WP_000991388.1 | Protein TraI | Relaxase |
| C6P67_RS26415 () | 175042..175374 | - | 333 | WP_001291058.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|