MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 133362 bp
Accession: NZ_CP027371 Location: 3198060..3331421 Organism: Escherichia coli strain 2015C-3905 Replicon: chromosome
Accession: NZ_CP027371 Location: 3198060..3331421 Organism: Escherichia coli strain 2015C-3905 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P67_RS16665 () | 3193265..3194497 | - | 1233 | WP_106879159.1 | phosphoadenosine phosphosulfate reductase | - |
| C6P67_RS16670 () | 3194998..3197679 | - | 2682 | WP_187767778.1 | DUF2726 domain-containing protein | - |
| C6P67_RS16675 () | 3197920..3198745 | - | 826 | Protein_3046 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| C6P67_RS16685 () | 3199171..3200916 | - | 1746 | WP_042109858.1 | NERD domain-containing protein | - |
| C6P67_RS16690 () | 3201094..3201642 | - | 549 | WP_072018345.1 | Outer membrane protein X | VF |
| C6P67_RS26595 () | 3202212..3202526 | - | 315 | WP_024226416.1 | hypothetical protein | - |
| C6P67_RS16710 () | 3202630..3202866 | - | 237 | WP_000500956.1 | hypothetical protein | - |
| C6P67_RS16715 () | 3202853..3206506 | - | 3654 | Protein_3051 | 16S rRNA endonuclease CdiA | VF |
| C6P67_RS16730 () | 3207314..3216286 | - | 8973 | WP_106879161.1 | 16S rRNA endonuclease CdiA | VF |
| C6P67_RS16735 () | 3216302..3216829 | - | 528 | WP_001243916.1 | Leukotoxin-activating lysine-acyltransferase LtxC | VF |
| C6P67_RS16740 () | 3216839..3218491 | - | 1653 | WP_032190534.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6P67_RS16745 () | 3219167..3219358 | + | 192 | WP_032186109.1 | DUF4222 domain-containing protein | - |
| C6P67_RS16750 () | 3219413..3219631 | - | 219 | Protein_3056 | hypothetical protein | - |
| C6P67_RS16755 () | 3219727..3220350 | - | 624 | WP_001366001.1 | hypothetical protein | - |
| C6P67_RS16760 () | 3220439..3220936 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| C6P67_RS16765 () | 3221286..3221693 | - | 408 | WP_136760218.1 | inovirus-type Gp2 protein | - |
| C6P67_RS16770 () | 3221874..3222071 | - | 198 | WP_001367978.1 | inovirus-type Gp2 protein | - |
| C6P67_RS16775 () | 3222155..3222415 | + | 261 | Protein_3061 | IS3 family transposase ISSfl10 | Transposase |
| C6P67_RS16780 () | 3222459..3224072 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS16785 () | 3224103..3224453 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS16790 () | 3224450..3224875 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6P67_RS16795 () | 3224962..3225693 | + | 732 | Protein_3065 | IS3 family transposase ISSd1 | Transposase |
| C6P67_RS16800 () | 3225967..3226392 | - | 426 | WP_001013311.1 | hypothetical protein | - |
| C6P67_RS16805 () | 3226389..3226772 | - | 384 | WP_000271013.1 | hypothetical protein | - |
| C6P67_RS16810 () | 3227033..3227602 | - | 570 | WP_000221481.1 | inovirus Gp2 family protein | - |
| C6P67_RS16815 () | 3227806..3228003 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| C6P67_RS16820 () | 3228349..3228498 | - | 150 | WP_071528427.1 | hemolysin activation protein | - |
| C6P67_RS16825 () | 3229373..3229579 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| C6P67_RS16830 () | 3229666..3230268 | + | 603 | WP_000804459.1 | hypothetical protein | - |
| C6P67_RS16845 () | 3230590..3232074 | - | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| C6P67_RS16855 () | 3233301..3234173 | + | 873 | WP_001069680.1 | GTPase family protein | - |
| C6P67_RS16860 () | 3234501..3237620 | + | 3120 | WP_106879163.1 | autotransporter adhesin Ag43 | - |
| C6P67_RS16865 () | 3237741..3240257 | + | 2517 | WP_106879164.1 | hypothetical protein | - |
| C6P67_RS16870 () | 3240333..3240788 | + | 456 | WP_032186189.1 | hypothetical protein | - |
| C6P67_RS16875 () | 3240867..3241100 | + | 234 | WP_106879165.1 | DUF905 family protein | - |
| C6P67_RS16885 () | 3241200..3242018 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| C6P67_RS16890 () | 3242073..3242558 | + | 486 | WP_001562321.1 | antirestriction protein | - |
| C6P67_RS16895 () | 3242574..3243050 | + | 477 | WP_001186726.1 | RadC family protein | - |
| C6P67_RS16900 () | 3243113..3243334 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| C6P67_RS16905 () | 3243497..3243871 | + | 375 | WP_001280952.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6P67_RS16910 () | 3243918..3244295 | + | 378 | WP_000854902.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6P67_RS16915 () | 3244292..3244780 | + | 489 | WP_000779175.1 | hypothetical protein | - |
| C6P67_RS16920 () | 3244792..3244989 | + | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| C6P67_RS16925 () | 3245074..3245916 | + | 843 | WP_001280537.1 | DUF4942 domain-containing protein | - |
| C6P67_RS16930 () | 3246259..3246795 | - | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| C6P67_RS16935 () | 3246797..3247975 | - | 1179 | WP_000094974.1 | Type II secretion system protein L | VF |
| C6P67_RS16940 () | 3247972..3248949 | - | 978 | WP_000633220.1 | Putative type II secretion system protein K | VF |
| C6P67_RS16945 () | 3248952..3249551 | - | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| C6P67_RS16950 () | 3249548..3249919 | - | 372 | WP_000820126.1 | Type II secretion system protein I | VF |
| C6P67_RS16955 () | 3249916..3250479 | - | 564 | WP_001115154.1 | Type II secretion system protein H | VF |
| C6P67_RS16960 () | 3250483..3250938 | - | 456 | WP_000287130.1 | Type II secretion system protein G | VF |
| C6P67_RS16965 () | 3250955..3252178 | - | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| C6P67_RS16970 () | 3252178..3253671 | - | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| C6P67_RS16975 () | 3253671..3255731 | - | 2061 | WP_106879166.1 | Type II secretion system protein D | VF |
| C6P67_RS16980 () | 3255761..3256720 | - | 960 | WP_001388405.1 | Type II secretion system protein C | VF |
| C6P67_RS16985 () | 3256738..3257148 | - | 411 | Protein_3099 | type II secretion system pilot lipoprotein GspS-beta | - |
| C6P67_RS16990 () | 3257214..3258023 | - | 810 | WP_001317326.1 | Leader peptidase PppA | VF |
| C6P67_RS16995 () | 3258163..3262728 | - | 4566 | WP_001388406.1 | hypothetical protein | VF |
| C6P67_RS17005 () | 3263214..3264896 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| C6P67_RS17010 () | 3265251..3267422 | - | 2172 | WP_000084052.1 | malate synthase G | - |
| C6P67_RS17015 () | 3267444..3267848 | - | 405 | WP_000853256.1 | protein GlcG | - |
| C6P67_RS17020 () | 3267853..3269076 | - | 1224 | WP_001194657.1 | glycolate oxidase subunit GlcF | - |
| C6P67_RS17025 () | 3269087..3270139 | - | 1053 | WP_106879167.1 | glycolate oxidase subunit GlcE | - |
| C6P67_RS17030 () | 3270139..3271638 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| C6P67_RS17035 () | 3271884..3272648 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| C6P67_RS17040 () | 3272655..3273797 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| C6P67_RS17050 () | 3274168..3275889 | + | 1722 | WP_001355868.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| C6P67_RS17055 () | 3275886..3276800 | + | 915 | WP_001077137.1 | NAD-dependent epimerase/dehydratase family protein | - |
| C6P67_RS17060 () | 3276832..3277080 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| C6P67_RS17065 () | 3277080..3278252 | + | 1173 | WP_000524966.1 | 8-amino-7-oxononanoate synthase | VF |
| C6P67_RS17070 () | 3278287..3279366 | - | 1080 | WP_001356132.1 | LPS export ABC transporter permease LptG | - |
| C6P67_RS17075 () | 3279363..3280433 | - | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| C6P67_RS17080 () | 3280464..3281024 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| C6P67_RS17085 () | 3281036..3281860 | - | 825 | WP_000984976.1 | hypothetical protein | - |
| C6P67_RS17090 () | 3281860..3283209 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| C6P67_RS17095 () | 3283255..3284013 | - | 759 | WP_000339531.1 | ATP-binding protein | - |
| C6P67_RS17100 () | 3284045..3284758 | - | 714 | WP_001076237.1 | thymidylate kinase | - |
| C6P67_RS17105 () | 3284932..3285624 | + | 693 | WP_001190783.1 | thymidylate kinase | - |
| C6P67_RS17110 () | 3285673..3287172 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| C6P67_RS17115 () | 3287464..3289323 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| C6P67_RS17120 () | 3289528..3290394 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| C6P67_RS17125 () | 3290517..3290765 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| C6P67_RS17130 () | 3290778..3291119 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| C6P67_RS17135 () | 3291112..3291600 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| C6P67_RS17140 () | 3291593..3292087 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| C6P67_RS17145 () | 3292087..3293790 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| C6P67_RS17150 () | 3293787..3294965 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| C6P67_RS17155 () | 3294955..3295941 | - | 987 | WP_001081882.1 | hydrogenase 2 operon protein HybA | - |
| C6P67_RS17160 () | 3295944..3297062 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| C6P67_RS17170 () | 3297251..3297538 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| C6P67_RS17175 () | 3297657..3298544 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| C6P67_RS17180 () | 3298701..3299741 | + | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| C6P67_RS17185 () | 3299781..3300275 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| C6P67_RS17190 () | 3300466..3301350 | + | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| C6P67_RS17195 () | 3301389..3301814 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| C6P67_RS17200 () | 3301821..3302555 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| C6P67_RS17210 () | 3302807..3303994 | + | 1188 | WP_001299407.1 | cystathionine beta-lyase | - |
| C6P67_RS17215 () | 3304134..3304793 | + | 660 | WP_000268419.1 | DedA family protein | - |
| C6P67_RS17220 () | 3304833..3305732 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| C6P67_RS17225 () | 3305926..3307089 | + | 1164 | WP_001058813.1 | alcohol dehydrogenase | - |
| C6P67_RS17230 () | 3307194..3308021 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| C6P67_RS17235 () | 3308221..3309147 | + | 927 | WP_000691620.1 | YbjP/YqhG family protein | - |
| C6P67_RS17240 () | 3309198..3309455 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| C6P67_RS17245 () | 3309498..3311717 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| C6P67_RS17250 () | 3311828..3313240 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| C6P67_RS17255 () | 3313315..3314052 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| C6P67_RS17260 () | 3314285..3316543 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| C6P67_RS17270 () | 3317089..3317571 | - | 483 | WP_000183494.1 | transcriptional regulator | - |
| C6P67_RS17275 () | 3317624..3318016 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| C6P67_RS17280 () | 3318168..3318827 | + | 660 | WP_001221502.1 | Transcriptional regulatory protein QseB | VF |
| C6P67_RS17285 () | 3318824..3320173 | + | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| C6P67_RS17290 () | 3320219..3320551 | - | 333 | WP_000912120.1 | DUF2645 family protein | - |
| C6P67_RS17295 () | 3320870..3321451 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| C6P67_RS17300 () | 3321482..3321796 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| C6P67_RS17305 () | 3321844..3323736 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| C6P67_RS17310 () | 3323765..3324346 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| C6P67_RS17315 () | 3324346..3325173 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| C6P67_RS17320 () | 3325198..3325620 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| C6P67_RS17325 () | 3325621..3326250 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| C6P67_RS17330 () | 3326455..3327936 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| C6P67_RS17340 () | 3328084..3328755 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| C6P67_RS17345 () | 3328761..3329921 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| C6P67_RS17350 () | 3329959..3330747 | - | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| C6P67_RS17355 () | 3330890..3331663 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| C6P67_RS17360 () | 3331721..3331891 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| C6P67_RS17365 () | 3332152..3332805 | - | 654 | WP_106879168.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| C6P67_RS17370 () | 3333179..3333469 | + | 291 | WP_001297598.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| C6P67_RS17375 () | 3333752..3334303 | + | 552 | WP_001272149.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|