MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 139058 bp
Accession: NZ_CP027366 Location: 3405466..3544523 Organism: Escherichia coli strain 89-3156 Replicon: chromosome
Accession: NZ_CP027366 Location: 3405466..3544523 Organism: Escherichia coli strain 89-3156 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P65_RS17670 () | 3400768..3401508 | - | 741 | WP_001367953.1 | porin family protein | - |
| C6P65_RS17675 () | 3401896..3403722 | + | 1827 | WP_001106664.1 | two-component system sensor histidine kinase AtoS | - |
| C6P65_RS17680 () | 3403719..3405104 | + | 1386 | WP_000125284.1 | acetoacetate metabolism transcriptional regulator AtoC | - |
| C6P65_RS17685 () | 3405300..3405962 | + | 663 | WP_000850528.1 | acetate CoA-transferase subunit alpha | - |
| C6P65_RS17690 () | 3405962..3406612 | + | 651 | WP_000339054.1 | acetate CoA-transferase subunit beta | - |
| C6P65_RS17695 () | 3406609..3407931 | + | 1323 | WP_000580275.1 | TIGR00366 family protein | - |
| C6P65_RS17700 () | 3407962..3409145 | + | 1184 | Protein_3254 | acetyl-CoA acetyltransferase | - |
| C6P65_RS17710 () | 3409555..3410211 | - | 657 | Protein_3255 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS27265 () | 3411300..3411479 | + | 180 | WP_071531291.1 | hypothetical protein | - |
| C6P65_RS17730 () | 3411531..3411724 | + | 194 | Protein_3257 | hypothetical protein | - |
| C6P65_RS27270 () | 3412545..3412881 | - | 337 | Protein_3258 | hypothetical protein | - |
| C6P65_RS17740 () | 3413565..3413780 | - | 216 | Protein_3259 | hypothetical protein | - |
| C6P65_RS17750 () | 3415234..3417321 | + | 2088 | WP_001223358.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6P65_RS17755 () | 3417462..3417653 | - | 192 | Protein_3261 | IS256 family transposase ISEic2 | Transposase |
| C6P65_RS17760 () | 3417667..3419511 | - | 1845 | WP_000593011.1 | hypothetical protein | VF |
| C6P65_RS17770 () | 3420412..3420669 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| C6P65_RS17775 () | 3420738..3422435 | - | 1698 | WP_000401036.1 | sulfatase | - |
| C6P65_RS17780 () | 3422530..3423666 | - | 1137 | WP_001228923.1 | hypothetical protein | VF |
| C6P65_RS17785 () | 3424342..3424550 | + | 209 | Protein_3266 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P65_RS17790 () | 3424537..3424849 | + | 313 | Protein_3267 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P65_RS17800 () | 3425803..3426540 | + | 738 | WP_000634448.1 | AraC family transcriptional regulator | - |
| C6P65_RS17805 () | 3427439..3431533 | + | 4095 | WP_001034012.1 | hypothetical protein | VF |
| C6P65_RS17810 () | 3431837..3432028 | + | 192 | WP_000789660.1 | hypothetical protein | - |
| C6P65_RS17815 () | 3432039..3432404 | + | 366 | WP_000997724.1 | hypothetical protein | - |
| C6P65_RS17820 () | 3432414..3432605 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| C6P65_RS17825 () | 3432639..3432848 | + | 210 | WP_000323309.1 | hypothetical protein | - |
| C6P65_RS17830 () | 3432875..3433234 | - | 360 | Protein_3274 | IS66 family transposase ISCro1 | Transposase |
| C6P65_RS17835 () | 3433346..3433990 | - | 645 | WP_001376509.1 | hypothetical protein | - |
| C6P65_RS17840 () | 3434011..3434280 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| C6P65_RS17845 () | 3434359..3434997 | - | 639 | WP_000502848.1 | ParB N-terminal domain-containing protein | - |
| C6P65_RS17850 () | 3434982..3436214 | - | 1233 | WP_001285503.1 | phosphoadenosine phosphosulfate reductase | - |
| C6P65_RS17855 () | 3436507..3436932 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS17860 () | 3436929..3437279 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS17865 () | 3437310..3438923 | + | 1614 | WP_000080191.1 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS17870 () | 3439254..3441934 | - | 2681 | Protein_3282 | DUF2726 domain-containing protein | - |
| C6P65_RS17875 () | 3442175..3443000 | - | 826 | Protein_3283 | hypothetical protein | VF |
| C6P65_RS17885 () | 3443425..3445170 | - | 1746 | WP_024177317.1 | NERD domain-containing protein | - |
| C6P65_RS17890 () | 3445348..3445896 | - | 549 | WP_021293029.1 | hypothetical protein | VF |
| C6P65_RS27275 () | 3446466..3446780 | - | 315 | WP_000931686.1 | hypothetical protein | - |
| C6P65_RS17910 () | 3446884..3447120 | - | 237 | WP_000500956.1 | hypothetical protein | - |
| C6P65_RS17915 () | 3447107..3456220 | - | 9114 | WP_047090654.1 | hypothetical protein | VF |
| C6P65_RS17920 () | 3456236..3456763 | - | 528 | WP_001243916.1 | hypothetical protein | VF |
| C6P65_RS17925 () | 3456773..3458425 | - | 1653 | WP_001376511.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6P65_RS17930 () | 3459101..3459292 | + | 192 | WP_001287885.1 | DUF4222 domain-containing protein | - |
| C6P65_RS17935 () | 3459345..3459578 | - | 234 | WP_000124190.1 | hypothetical protein | - |
| C6P65_RS17940 () | 3459674..3460297 | - | 624 | WP_001367955.1 | hypothetical protein | - |
| C6P65_RS17945 () | 3460386..3460883 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| C6P65_RS17950 () | 3461233..3461640 | - | 408 | WP_072095404.1 | inovirus-type Gp2 protein | - |
| C6P65_RS17955 () | 3461821..3462018 | - | 198 | WP_001367978.1 | inovirus-type Gp2 protein | - |
| C6P65_RS17960 () | 3462102..3463258 | + | 1157 | WP_085948469.1 | IS3 family transposase ISSd1 | Transposase |
| C6P65_RS17965 () | 3463532..3463956 | - | 425 | Protein_3298 | zinc-ribbon domain-containing protein | - |
| C6P65_RS17970 () | 3463953..3464336 | - | 384 | WP_000271013.1 | hypothetical protein | - |
| C6P65_RS17975 () | 3464597..3465166 | - | 570 | WP_000221481.1 | inovirus Gp2 family protein | - |
| C6P65_RS17980 () | 3465370..3465567 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| C6P65_RS17985 () | 3465913..3466062 | - | 150 | WP_071528427.1 | hemolysin activation protein | - |
| C6P65_RS17990 () | 3466814..3467020 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| C6P65_RS17995 () | 3467101..3467391 | + | 291 | Protein_3304 | malate transporter | - |
| C6P65_RS18000 () | 3467464..3468641 | + | 1178 | WP_199851442.1 | IS3 family transposase ISCfr6 | Transposase |
| C6P65_RS18005 () | 3468662..3468970 | + | 309 | WP_000889293.1 | hypothetical protein | - |
| C6P65_RS18020 () | 3469292..3470776 | - | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| C6P65_RS18030 () | 3472005..3472877 | + | 873 | WP_001069680.1 | GTPase family protein | - |
| C6P65_RS18035 () | 3473205..3476324 | + | 3120 | WP_000820441.1 | autotransporter adhesin Ag43 | - |
| C6P65_RS18040 () | 3476445..3478960 | + | 2516 | Protein_3310 | hypothetical protein | - |
| C6P65_RS18045 () | 3479036..3479491 | + | 456 | WP_000581507.1 | hypothetical protein | - |
| C6P65_RS18050 () | 3479570..3479803 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| C6P65_RS18060 () | 3479903..3480721 | + | 819 | WP_001234626.1 | DUF945 domain-containing protein | - |
| C6P65_RS18065 () | 3480776..3481261 | + | 486 | WP_062881310.1 | antirestriction protein | - |
| C6P65_RS18070 () | 3481277..3481753 | + | 477 | WP_001186725.1 | RadC family protein | - |
| C6P65_RS18075 () | 3481816..3482037 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| C6P65_RS18080 () | 3482200..3482574 | + | 375 | WP_001280952.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6P65_RS18085 () | 3482621..3482998 | + | 378 | WP_000854902.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6P65_RS18090 () | 3482995..3483483 | + | 489 | WP_000779175.1 | hypothetical protein | - |
| C6P65_RS18095 () | 3483495..3483692 | + | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| C6P65_RS18100 () | 3483777..3484619 | + | 843 | WP_001280537.1 | DUF4942 domain-containing protein | - |
| C6P65_RS18105 () | 3484962..3485498 | - | 537 | WP_000942798.1 | hypothetical protein | VF |
| C6P65_RS18110 () | 3485500..3486678 | - | 1179 | WP_000094987.1 | hypothetical protein | VF |
| C6P65_RS18115 () | 3486675..3487652 | - | 978 | WP_000633193.1 | hypothetical protein | VF |
| C6P65_RS18120 () | 3487649..3488254 | - | 606 | WP_001255041.1 | hypothetical protein | VF |
| C6P65_RS18125 () | 3488251..3488622 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| C6P65_RS18130 () | 3488619..3489182 | - | 564 | WP_001115140.1 | hypothetical protein | VF |
| C6P65_RS18135 () | 3489186..3489641 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| C6P65_RS18140 () | 3489658..3490880 | - | 1223 | Protein_3329 | hypothetical protein | VF |
| C6P65_RS18145 () | 3490880..3492373 | - | 1494 | WP_000249348.1 | hypothetical protein | VF |
| C6P65_RS18150 () | 3492373..3494433 | - | 2061 | WP_000498829.1 | hypothetical protein | VF |
| C6P65_RS18155 () | 3494463..3495422 | - | 960 | WP_000135063.1 | hypothetical protein | VF |
| C6P65_RS18160 () | 3495440..3495850 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| C6P65_RS18165 () | 3495916..3496725 | - | 810 | WP_001365924.1 | hypothetical protein | VF |
| C6P65_RS18170 () | 3496865..3501430 | - | 4566 | WP_001034497.1 | hypothetical protein | VF |
| C6P65_RS18180 () | 3501916..3503598 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| C6P65_RS18185 () | 3503954..3506125 | - | 2172 | WP_000084084.1 | malate synthase G | - |
| C6P65_RS18190 () | 3506147..3506551 | - | 405 | WP_000853256.1 | protein GlcG | - |
| C6P65_RS18195 () | 3506556..3507779 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| C6P65_RS18200 () | 3507790..3508842 | - | 1053 | WP_000943055.1 | glycolate oxidase subunit GlcE | - |
| C6P65_RS18205 () | 3508842..3510341 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| C6P65_RS18210 () | 3510592..3511356 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| C6P65_RS18215 () | 3511363..3512505 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| C6P65_RS18225 () | 3512876..3514597 | + | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| C6P65_RS18230 () | 3514594..3515508 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| C6P65_RS18235 () | 3515540..3515788 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| C6P65_RS18240 () | 3515788..3516960 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| C6P65_RS18245 () | 3516995..3518074 | - | 1080 | WP_001307395.1 | LPS export ABC transporter permease LptG | - |
| C6P65_RS18250 () | 3518071..3519141 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| C6P65_RS18255 () | 3519172..3519732 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| C6P65_RS18260 () | 3519744..3520568 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| C6P65_RS18270 () | 3520568..3521916 | - | 1349 | Protein_3352 | lipopolysaccharide biosynthesis protein | - |
| C6P65_RS18275 () | 3521962..3522720 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| C6P65_RS18280 () | 3522752..3523465 | - | 714 | WP_001076097.1 | thymidylate kinase | - |
| C6P65_RS18285 () | 3523639..3524331 | + | 693 | WP_001190780.1 | thymidylate kinase | - |
| C6P65_RS18290 () | 3524380..3525879 | - | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| C6P65_RS18295 () | 3526171..3528030 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| C6P65_RS18300 () | 3528235..3529101 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| C6P65_RS18310 () | 3529401..3530381 | + | 981 | WP_000399689.1 | IS110 family transposase IS621 | Transposase |
| C6P65_RS18315 () | 3530503..3530751 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| C6P65_RS18320 () | 3530764..3531105 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| C6P65_RS18325 () | 3531098..3531586 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| C6P65_RS18330 () | 3531579..3532073 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| C6P65_RS18335 () | 3532073..3533776 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| C6P65_RS18340 () | 3533773..3534951 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| C6P65_RS18345 () | 3534941..3535927 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| C6P65_RS18350 () | 3535930..3537048 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| C6P65_RS18360 () | 3537237..3537524 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| C6P65_RS18365 () | 3537643..3538530 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| C6P65_RS18370 () | 3538687..3539727 | + | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| C6P65_RS18375 () | 3539767..3540261 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| C6P65_RS18380 () | 3540452..3541336 | + | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C6P65_RS18385 () | 3541608..3542033 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| C6P65_RS18390 () | 3542040..3542774 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| C6P65_RS18400 () | 3543026..3544213 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| C6P65_RS18405 () | 3544353..3545012 | + | 660 | WP_000268419.1 | DedA family protein | - |
| C6P65_RS18410 () | 3545052..3545951 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| C6P65_RS18415 () | 3546145..3547308 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| C6P65_RS18420 () | 3547413..3548240 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| C6P65_RS18425 () | 3548440..3549366 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|