MGE detailed information
MGE type: Prophage MGE length: 69549 bp
Accession: NZ_CP027338 Location: 794965..864513 Organism: Escherichia coli strain 2014C-3051 Replicon: chromosome
Accession: NZ_CP027338 Location: 794965..864513 Organism: Escherichia coli strain 2014C-3051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N28_RS31440 () | 790954..791001 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6N28_RS04550 () | 791015..791998 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C6N28_RS04560 () | 792476..793849 | + | 1374 | WP_032323876.1 | ATP-dependent RNA helicase DbpA | - |
| C6N28_RS04565 () | 793978..794913 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6N28_RS04570 () | 794965..796200 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6N28_RS04575 () | 796202..796417 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6N28_RS04580 () | 796517..796705 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 796521..796699 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 796521..796699 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 796521..796699 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 796521..796699 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6N28_RS04585 () | 796743..796892 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6N28_RS04590 () | 796948..797757 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| C6N28_RS04595 () | 797750..800350 | - | 2601 | WP_000105153.1 | exodeoxyribonuclease VIII | - |
| C6N28_RS04600 () | 800452..800727 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| C6N28_RS04605 () | 800802..800972 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C6N28_RS04610 () | 800972..801193 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C6N28_RS04620 () | 801635..802123 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C6N28_RS04625 () | 802120..802275 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C6N28_RS04630 () | 802286..802465 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| C6N28_RS04640 () | 802708..803127 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| C6N28_RS04645 () | 803207..803461 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| C6N28_RS04650 () | 803458..803880 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| C6N28_RS04655 () | 803958..804746 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| C6N28_RS04660 () | 804753..805499 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| C6N28_RS04665 () | 805522..806283 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| C6N28_RS04670 () | 806299..806721 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| C6N28_RS04675 () | 806827..807039 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| C6N28_RS04680 () | 807072..807289 | + | 218 | Protein_859 | DUF4014 family protein | - |
| C6N28_RS04685 () | 807291..807554 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| C6N28_RS04690 () | 807565..807726 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| C6N28_RS04695 () | 807805..808050 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| C6N28_RS04700 () | 808482..809633 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| C6N28_RS04705 () | 809601..810590 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| C6N28_RS04710 () | 810590..811981 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| C6N28_RS04715 () | 812481..813080 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| C6N28_RS04720 () | 813080..813370 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| C6N28_RS04725 () | 813367..813921 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| C6N28_RS04740 () | 814483..814914 | + | 432 | WP_032324351.1 | tellurite resistance TerB family protein | - |
| C6N28_RS04745 () | 814911..815166 | + | 256 | Protein_870 | DUF3927 family protein | - |
| C6N28_RS04750 () | 815489..817342 | + | 1854 | WP_000143077.1 | SASA family carbohydrate esterase | - |
| C6N28_RS04755 () | 817492..817707 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| C6N28_RS04760 () | 817712..818056 | + | 345 | WP_032325202.1 | YdfR family protein | - |
| C6N28_RS04765 () | 818107..818640 | + | 534 | WP_000992086.1 | lysozyme | - |
| C6N28_RS04770 () | 818914..819609 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| C6N28_RS30850 () | 819704..819835 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| C6N28_RS30860 () | 820058..820243 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| C6N28_RS04790 () | 820644..820970 | + | 327 | WP_000828070.1 | TonB family protein | - |
| C6N28_RS04795 () | 821102..821302 | - | 201 | WP_032277401.1 | YlcI/YnfO family protein | - |
| C6N28_RS04800 () | 821344..821709 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| C6N28_RS04810 () | 821998..822561 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| C6N28_RS04815 () | 822558..824219 | + | 1662 | WP_106889267.1 | terminase large subunit | - |
| C6N28_RS04820 () | 824283..826220 | + | 1938 | WP_096948424.1 | phage major capsid protein | - |
| C6N28_RS04825 () | 826265..826486 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| C6N28_RS04830 () | 826432..829016 | + | 2585 | Protein_885 | phage portal protein | - |
| C6N28_RS04835 () | 829013..829339 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| C6N28_RS04840 () | 829349..829699 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| C6N28_RS04845 () | 829696..830142 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C6N28_RS04850 () | 830139..830483 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6N28_RS04855 () | 830549..831265 | + | 717 | WP_106881370.1 | phage tail protein | - |
| C6N28_RS04860 () | 831271..831645 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C6N28_RS04865 () | 831741..831950 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6N28_RS04870 () | 832002..835244 | + | 3243 | WP_106889260.1 | phage tail tape measure protein | - |
| C6N28_RS04875 () | 835237..835578 | + | 342 | WP_000807927.1 | phage tail protein | - |
| C6N28_RS04880 () | 835578..836276 | + | 699 | WP_032325187.1 | phage minor tail protein L | - |
| C6N28_RS04885 () | 836282..837025 | + | 744 | WP_001429308.1 | C40 family peptidase | - |
| C6N28_RS04890 () | 836971..837603 | + | 633 | WP_096844540.1 | tail assembly protein | - |
| C6N28_RS04900 () | 837839..841321 | + | 3483 | WP_032325372.1 | host specificity protein J | - |
| C6N28_RS04905 () | 841390..842013 | + | 624 | WP_032271866.1 | Attachment invasion locus protein | VF |
| C6N28_RS04910 () | 842078..843390 | + | 1313 | Protein_900 | ISNCY family transposase KIS | Transposase |
| C6N28_RS04915 () | 843392..843661 | + | 270 | WP_001023455.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N28_RS04920 () | 843774..844349 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| C6N28_RS04925 () | 844640..845221 | + | 582 | WP_001118085.1 | hypothetical protein | VF |
| C6N28_RS04930 () | 845289..845924 | + | 636 | WP_106889268.1 | hypothetical protein | VF |
| C6N28_RS04935 () | 846052..847110 | - | 1059 | WP_001299273.1 | Effector protein hopW1-1 | VF |
| C6N28_RS04940 () | 847185..847835 | - | 651 | WP_001144080.1 | hypothetical protein | VF |
| C6N28_RS04945 () | 848019..848609 | + | 591 | WP_001132151.1 | hypothetical protein | VF |
| C6N28_RS04950 () | 848632..848717 | - | 86 | Protein_908 | YkgJ family cysteine cluster protein | - |
| C6N28_RS04955 () | 848826..848990 | + | 165 | WP_001435497.1 | tail fiber assembly protein | - |
| C6N28_RS04960 () | 849223..850086 | - | 864 | WP_000799402.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6N28_RS04965 () | 850070..851206 | - | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| C6N28_RS04975 () | 851456..852685 | + | 1230 | WP_000359438.1 | peptidase T | - |
| C6N28_RS04980 () | 852831..853952 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6N28_RS04985 () | 854201..855430 | + | 1230 | WP_000085258.1 | Prophage integrase IntS ; Integrase | Integrase |
| C6N28_RS04990 () | 855796..855984 | + | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| C6N28_RS04995 () | 856042..857070 | + | 1029 | WP_012816761.1 | host cell division inhibitor Icd-like protein | - |
| C6N28_RS05000 () | 857060..857317 | + | 258 | WP_096957805.1 | hypothetical protein | - |
| C6N28_RS05005 () | 857290..857523 | + | 234 | WP_001204078.1 | hypothetical protein | - |
| C6N28_RS05010 () | 857516..857749 | + | 234 | WP_001204981.1 | hypothetical protein | - |
| C6N28_RS05015 () | 857755..858054 | + | 300 | WP_000770175.1 | DUF4222 domain-containing protein | - |
| C6N28_RS05020 () | 858051..859451 | + | 1401 | WP_000833618.1 | helicase RepA family protein | - |
| C6N28_RS05025 () | 859652..859903 | + | 252 | WP_000192401.1 | hypothetical protein | - |
| C6N28_RS05030 () | 859900..860310 | + | 411 | WP_000126687.1 | single-stranded DNA-binding protein | - |
| C6N28_RS05035 () | 860321..860593 | + | 273 | WP_000233304.1 | PerC family transcriptional regulator | - |
| C6N28_RS05045 () | 860720..860944 | + | 225 | WP_001132079.1 | hypothetical protein | - |
| C6N28_RS05050 () | 861196..861402 | + | 207 | WP_000796958.1 | hypothetical protein | - |
| C6N28_RS05055 () | 861402..862457 | + | 1056 | WP_106889269.1 | major capsid protein | - |
| C6N28_RS05060 () | 862470..862838 | + | 369 | WP_050439453.1 | head decoration protein | - |
| C6N28_RS05065 () | 862814..863227 | + | 414 | WP_000224599.1 | hypothetical protein | - |
| C6N28_RS05070 () | 863434..863976 | + | 543 | WP_001432354.1 | terminase small subunit | - |
| C6N28_RS05080 () | 864232..864513 | + | 282 | WP_000133424.1 | hypothetical protein | - |
| C6N28_RS05085 () | 865115..866575 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| C6N28_RS05090 () | 866575..867246 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C6N28_RS05095 () | 867414..868784 | - | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| C6N28_RS05100 () | 868788..869429 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|