NZ_CP0273102007845..2204870

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 197026 bp
Accession: NZ_CP027310        Location: 2007845..2204870         Organism: Escherichia coli strain 2014C-4135       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C6N22_RS10310 () 2004175..2005920 - 1746 WP_000918827.1 DNA primase -
C6N22_RS10315 () 2006031..2006246 - 216 WP_001144069.1 30S ribosomal protein S21 -
C6N22_RS10320 () 2006483..2007496 + 1014 WP_001264365.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
C6N22_RS10325 () 2007539..2009002 - 1464 WP_000804966.1 L-tartrate/succinate antiporter -
C6N22_RS10330 () 2009050..2009655 - 606 WP_000722957.1 L(+)-tartrate dehydratase subunit beta -
C6N22_RS10335 () 2009652..2010563 - 912 WP_000986797.1 L(+)-tartrate dehydratase subunit alpha -
C6N22_RS10345 () 2010770..2011702 + 933 WP_000935206.1 DNA-binding transcriptional activator TtdR -
C6N22_RS10350 () 2011715..2012332 - 618 WP_001272796.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
C6N22_RS10355 () 2012437..2012805 + 369 WP_001295541.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase -
C6N22_RS10360 () 2012895..2013716 + 822 WP_001305111.1 undecaprenyl-diphosphate phosphatase -
C6N22_RS10365 () 2013879..2015117 - 1239 WP_000708471.1 fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca -
C6N22_RS10370 () 2015181..2015801 - 621 WP_001125332.1 SH3 domain-containing protein -
C6N22_RS10380 () 2016043..2017344 + 1302 WP_000046264.1 inorganic triphosphatase -
C6N22_RS10385 () 2017367..2020207 + 2841 WP_001315860.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
C6N22_RS10390 () 2020255..2021688 + 1434 WP_000869178.1 Polyphosphate kinase VF
- () 2021768..2021909 + 142 NuclAT_6 - -
- () 2021768..2021909 + 142 NuclAT_6 - -
- () 2021768..2021909 + 142 NuclAT_6 - -
- () 2021768..2021909 + 142 NuclAT_6 - -
C6N22_RS10395 () 2021808..2021867 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- () 2022144..2022285 + 142 NuclAT_1 - -
- () 2022144..2022285 + 142 NuclAT_1 - -
- () 2022144..2022285 + 142 NuclAT_1 - -
- () 2022144..2022285 + 142 NuclAT_1 - -
- () 2022144..2022285 + 142 NuclAT_7 - -
- () 2022144..2022285 + 142 NuclAT_7 - -
- () 2022144..2022285 + 142 NuclAT_7 - -
- () 2022144..2022285 + 142 NuclAT_7 - -
C6N22_RS10405 () 2022184..2022243 - 60 WP_001387081.1 type I toxin-antitoxin system Ibs family toxin -
C6N22_RS10410 () 2022482..2024143 - 1662 WP_000341046.1 flotillin family protein -
C6N22_RS10415 () 2024170..2024799 - 630 WP_000599947.1 DUF1449 family protein -
C6N22_RS10420 () 2025068..2025268 + 201 WP_000350095.1 cell surface composition regulator GlgS -
C6N22_RS10425 () 2025311..2026375 - 1065 WP_044862911.1 fimbrial protein -
C6N22_RS10430 () 2026377..2027126 - 750 WP_001269825.1 Signal transduction histidine-protein kinase BaeS VF
C6N22_RS10435 () 2027142..2029646 - 2505 WP_000277135.1 Transcriptional regulatory protein CreB VF
C6N22_RS10440 () 2029706..2030257 - 552 WP_001272149.1 putative lipoprotein YiaD VF
C6N22_RS10445 () 2030509..2030829 - 321 WP_000566830.1 IS1182 family transposase ISBusp4 Transposase
C6N22_RS10450 () 2031203..2031856 + 654 WP_001076997.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
C6N22_RS10455 () 2032117..2032287 + 171 WP_000469266.1 hypothetical protein -
C6N22_RS10460 () 2032345..2033118 - 774 WP_001295627.1 zinc transporter ZupT -
C6N22_RS10465 () 2033261..2034049 + 789 WP_001299419.1 4,5-DOPA dioxygenase extradiol -
C6N22_RS10470 () 2034087..2035247 - 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
C6N22_RS10475 () 2035253..2035924 - 672 WP_000831543.1 DUF1190 family protein -
C6N22_RS10485 () 2036072..2037553 - 1482 WP_000735278.1 outer membrane channel protein TolC -
C6N22_RS10490 () 2037758..2038387 + 630 WP_000917117.1 ADP-ribose diphosphatase -
C6N22_RS10495 () 2038388..2038810 + 423 WP_000833393.1 DUF1249 family protein -
C6N22_RS10500 () 2038835..2039662 + 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
C6N22_RS10505 () 2039662..2040242 + 581 Protein_1885 esterase YqiA -
C6N22_RS10510 () 2040271..2042163 + 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
C6N22_RS10515 () 2042208..2043077 - 870 WP_001060171.1 DUF2608 domain-containing protein -
C6N22_RS10520 () 2043091..2043786 - 696 WP_000947444.1 porin -
C6N22_RS10525 () 2043921..2045044 - 1124 Protein_1889 esterase-like activity of phytase family protein -
C6N22_RS10530 () 2045074..2045988 - 915 WP_000712977.1 carbohydrate kinase family protein -
C6N22_RS10535 () 2045993..2046991 - 999 WP_001315863.1 SIS domain-containing protein -
C6N22_RS10540 () 2046991..2048067 - 1077 WP_001033125.1 ADP-ribosylglycohydrolase family protein -
C6N22_RS10545 () 2048081..2048833 - 753 WP_000619461.1 GntR family transcriptional regulator -
C6N22_RS10555 () 2049120..2050451 + 1332 WP_000778880.1 MFS transporter -
C6N22_RS10560 () 2050495..2050809 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
C6N22_RS10565 () 2050840..2051421 - 582 WP_000065440.1 NADPH:quinone oxidoreductase MdaB -
C6N22_RS10570 () 2051740..2052072 + 333 WP_000912123.1 DUF2645 family protein -
C6N22_RS10575 () 2052118..2053467 - 1350 WP_000673354.1 two-component system sensor histidine kinase QseC -
C6N22_RS10580 () 2053464..2054123 - 660 WP_001221502.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
C6N22_RS10585 () 2054275..2054667 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
C6N22_RS10590 () 2054720..2055202 + 483 WP_000183494.1 transcriptional regulator -
C6N22_RS10600 () 2055748..2058006 + 2259 WP_001281881.1 DNA topoisomerase IV subunit A -
C6N22_RS10605 () 2058239..2058976 + 738 WP_000965717.1 1-acylglycerol-3-phosphate O-acyltransferase -
C6N22_RS10610 () 2059051..2060463 + 1413 WP_000059395.1 cell division protein FtsP -
C6N22_RS10615 () 2060574..2062793 + 2220 WP_000095187.1 YgiQ family radical SAM protein -
C6N22_RS10620 () 2062836..2063093 - 258 WP_001702562.1 lipoprotein YqhH -
C6N22_RS10625 () 2063144..2064070 - 927 WP_000691598.1 YbjP/YqhG family protein -
C6N22_RS10630 () 2064270..2065097 - 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
C6N22_RS10635 () 2065202..2066365 - 1164 WP_001058807.1 alcohol dehydrogenase -
C6N22_RS10640 () 2066559..2067458 + 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
C6N22_RS10645 () 2067498..2068157 - 660 WP_000268414.1 DedA family protein -
C6N22_RS10650 () 2068297..2069484 - 1188 WP_001369830.1 cystathionine beta-lyase -
C6N22_RS10660 () 2069736..2070470 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
C6N22_RS10665 () 2070477..2070902 + 426 WP_001240712.1 TonB system transport protein ExbD -
C6N22_RS10670 () 2071174..2072058 - 885 WP_000018758.1 Pesticin receptor VF
C6N22_RS10675 () 2072249..2072743 + 495 WP_000439331.1 TIGR00645 family protein -
C6N22_RS10680 () 2072783..2073823 - 1041 WP_000262154.1 L-glyceraldehyde 3-phosphate reductase -
C6N22_RS10685 () 2073980..2074867 + 888 WP_001297303.1 dienelactone hydrolase family protein -
C6N22_RS10690 () 2074986..2075273 + 288 WP_001059136.1 DUF2623 domain-containing protein -
C6N22_RS10700 () 2075462..2076580 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
C6N22_RS10705 () 2076583..2077569 + 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
C6N22_RS10710 () 2077559..2078737 + 1179 WP_000017703.1 Ni/Fe-hydrogenase cytochrome b subunit -
C6N22_RS10715 () 2078734..2080437 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
C6N22_RS10720 () 2080437..2080931 + 495 WP_001221953.1 HyaD/HybD family hydrogenase maturation endopeptidase -
C6N22_RS10725 () 2080924..2081412 + 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
C6N22_RS10730 () 2081405..2081746 + 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
C6N22_RS10735 () 2081759..2082007 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
C6N22_RS10740 () 2082129..2083101 - 973 Protein_1928 IS110 family transposase IS621 Transposase
C6N22_RS10750 () 2083401..2084267 - 867 WP_001298746.1 glutathione-dependent disulfide-bond oxidoreductase -
C6N22_RS10755 () 2084472..2086331 + 1860 WP_001297309.1 bifunctional glutathionylspermidine amidase/synthase -
C6N22_RS10760 () 2086623..2088122 + 1500 WP_000933279.1 inorganic phosphate transporter PitB -
C6N22_RS10765 () 2088171..2088863 - 693 WP_001190773.1 thymidylate kinase -
C6N22_RS10770 () 2089037..2089750 + 714 WP_001076237.1 thymidylate kinase -
C6N22_RS10775 () 2089782..2090540 + 759 WP_000339532.1 hypothetical protein -
C6N22_RS10780 () 2090586..2091935 + 1350 WP_000896880.1 lipopolysaccharide biosynthesis protein -
C6N22_RS10785 () 2091935..2092759 + 825 WP_000984977.1 hypothetical protein -
C6N22_RS10790 () 2092771..2093331 + 561 WP_001315848.1 YtfJ family protein -
C6N22_RS10795 () 2093362..2094432 + 1071 WP_000779644.1 LPS export ABC transporter permease LptF -
C6N22_RS10800 () 2094429..2095508 + 1080 WP_001298753.1 LPS export ABC transporter permease LptG -
C6N22_RS10805 () 2095543..2096715 - 1173 WP_000524972.1 ABC transporter ATP-binding protein uup VF
C6N22_RS10810 () 2096715..2096963 - 249 WP_000248097.1 acyl carrier protein -
C6N22_RS10815 () 2096995..2097909 - 915 WP_001077177.1 NAD-dependent epimerase/dehydratase family protein -
C6N22_RS10820 () 2097906..2099627 - 1722 WP_001390306.1 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase VF
C6N22_RS10830 () 2099998..2101140 + 1143 WP_000388786.1 DNA-binding protein -
C6N22_RS10835 () 2101147..2101911 - 765 WP_001297764.1 transcriptional regulator GlcC -
C6N22_RS10840 () 2102162..2103661 + 1500 WP_000026117.1 glycolate oxidase subunit GlcD -
C6N22_RS10845 () 2103661..2104713 + 1053 WP_000943059.1 glycolate oxidase subunit GlcE -
C6N22_RS10850 () 2104724..2105947 + 1224 WP_001194682.1 glycolate oxidase subunit GlcF -
C6N22_RS10855 () 2105952..2106356 + 405 WP_000853256.1 protein GlcG -
C6N22_RS10860 () 2106378..2108549 + 2172 WP_000084053.1 malate synthase G -
C6N22_RS10865 () 2108905..2110586 + 1682 Protein_1951 glycolate permease GlcA -
C6N22_RS10875 () 2111071..2115639 + 4569 WP_001034504.1 hypothetical protein VF
C6N22_RS10880 () 2115779..2116588 + 810 WP_001317326.1 hypothetical protein VF
C6N22_RS10885 () 2116654..2117064 + 411 WP_001349452.1 type II secretion system pilot lipoprotein GspS-beta -
C6N22_RS10890 () 2117082..2118041 + 960 WP_001317325.1 Translocation and assembly module subunit TamB VF
C6N22_RS10895 () 2118071..2120131 + 2061 WP_000498824.1 Translocation and assembly module subunit TamA VF
C6N22_RS10900 () 2120131..2121624 + 1494 WP_000249368.1 Isoaspartyl peptidase VF
C6N22_RS10905 () 2121624..2122847 + 1224 WP_001173448.1 hypothetical protein VF
C6N22_RS10910 () 2122864..2123319 + 456 WP_001087296.1 hypothetical protein VF
C6N22_RS10915 () 2123323..2123886 + 564 WP_001115139.1 Cytochrome c-552 VF
C6N22_RS10920 () 2123883..2124254 + 372 WP_000820125.1 hypothetical protein VF
C6N22_RS10925 () 2124251..2124856 + 606 WP_001255030.1 Chaperone NapD VF
C6N22_RS10930 () 2124853..2125830 + 978 WP_000633239.1 Periplasmic nitrate reductase VF
C6N22_RS10935 () 2125827..2127005 + 1179 WP_000094989.1 Periplasmic nitrate reductase, electron transfer subunit VF
C6N22_RS10940 () 2127007..2127543 + 537 WP_000942795.1 Cytochrome c-type protein NapC VF
C6N22_RS10945 () 2127824..2128666 - 843 WP_001280493.1 DUF4942 domain-containing protein -
C6N22_RS10950 () 2128751..2128948 - 198 WP_085949090.1 DUF957 domain-containing protein -
C6N22_RS10955 () 2128976..2129173 - 198 Protein_1968 hypothetical protein -
C6N22_RS10960 () 2129170..2129547 - 378 WP_000854821.1 type IV toxin-antitoxin system toxin CbtA Toxin Detail
C6N22_RS10965 () 2129637..2130005 - 369 WP_001285610.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
C6N22_RS10970 () 2130085..2130306 - 222 WP_000692309.1 DUF987 domain-containing protein -
C6N22_RS10975 () 2130369..2130845 - 477 WP_044862993.1 RadC family protein -
C6N22_RS10980 () 2130861..2131346 - 486 WP_000849580.1 antirestriction protein -
C6N22_RS10985 () 2131401..2132219 - 819 WP_001234620.1 DUF945 domain-containing protein -
C6N22_RS10995 () 2132319..2132552 - 234 WP_001119729.1 DUF905 family protein -
C6N22_RS11000 () 2132631..2133086 - 456 WP_000581504.1 hypothetical protein -
C6N22_RS11005 () 2133162..2135678 - 2517 WP_001379184.1 hypothetical protein -
C6N22_RS11010 () 2135799..2138917 - 3119 Protein_1978 autotransporter adhesin Ag43 -
C6N22_RS11015 () 2139245..2140117 - 873 WP_001069673.1 GTPase family protein -
C6N22_RS11025 () 2141348..2142832 + 1485 WP_001297234.1 DUF3987 domain-containing protein -
C6N22_RS11035 () 2143154..2143756 - 603 WP_000804456.1 hypothetical protein -
C6N22_RS11040 () 2143843..2144049 - 207 WP_000632607.1 AlpA family transcriptional regulator -
C6N22_RS11045 () 2144801..2144950 + 150 WP_052904223.1 hemolysin activation protein -
C6N22_RS11050 () 2145296..2145493 - 198 WP_000236763.1 hypothetical protein -
C6N22_RS11055 () 2145697..2146266 + 570 WP_000221484.1 inovirus Gp2 family protein -
C6N22_RS11060 () 2146527..2146910 + 384 WP_000271031.1 hypothetical protein -
C6N22_RS11065 () 2146907..2147332 + 426 WP_001013762.1 hypothetical protein -
C6N22_RS11070 () 2147581..2147778 + 198 WP_000553835.1 inovirus-type Gp2 protein -
C6N22_RS11075 () 2147965..2148372 + 408 WP_179763680.1 inovirus-type Gp2 protein -
C6N22_RS11080 () 2148722..2149219 + 498 WP_021552435.1 hypothetical protein -
C6N22_RS11085 () 2149308..2149931 + 624 WP_001366001.1 hypothetical protein -
C6N22_RS11090 () 2150027..2150260 + 234 WP_000124190.1 hypothetical protein -
C6N22_RS11095 () 2150313..2150504 - 192 WP_001287885.1 DUF4222 domain-containing protein -
C6N22_RS11100 () 2151180..2152832 + 1653 WP_001379178.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
C6N22_RS11105 () 2152842..2153369 + 528 WP_001243916.1 hypothetical protein VF
C6N22_RS11110 () 2153385..2162320 + 8936 Protein_1996 K(+)/H(+) antiporter NhaP2 VF
C6N22_RS11115 () 2162317..2162571 + 255 WP_001222075.1 hypothetical protein -
C6N22_RS26315 () 2162708..2162932 + 225 WP_001378804.1 hypothetical protein -
C6N22_RS11125 () 2163255..2164788 + 1534 Protein_1999 IS3 family transposase -
C6N22_RS11135 () 2165219..2165746 + 528 WP_000182867.1 hypothetical protein -
C6N22_RS11140 () 2165788..2165971 - 184 Protein_2001 transposase domain-containing protein -
C6N22_RS11145 () 2166000..2166275 + 276 WP_000549471.1 hypothetical protein -
C6N22_RS11150 () 2166409..2166681 + 273 WP_000906734.1 hypothetical protein -
C6N22_RS11155 () 2166688..2166930 + 243 WP_000993065.1 hypothetical protein -
C6N22_RS11165 () 2167474..2168049 + 576 WP_000737515.1 hypothetical protein VF
C6N22_RS11170 () 2168227..2169972 + 1746 WP_044863049.1 AAA family ATPase -
C6N22_RS26550 () 2170457..2170720 + 264 Protein_2007 Phosphomethylpyrimidine synthase VF
C6N22_RS26555 () 2171039..2171219 + 181 Protein_2008 Phosphomethylpyrimidine synthase VF
C6N22_RS11185 () 2171460..2174141 + 2682 WP_170960334.1 DUF2726 domain-containing protein -
C6N22_RS11190 () 2174641..2175873 + 1233 WP_001285503.1 phosphoadenosine phosphosulfate reductase -
C6N22_RS11195 () 2175858..2176496 + 639 WP_000502848.1 ParB N-terminal domain-containing protein -
C6N22_RS11200 () 2176575..2176844 + 270 WP_000226517.1 PerC family transcriptional regulator -
C6N22_RS11205 () 2176865..2177509 + 645 WP_001378814.1 hypothetical protein -
C6N22_RS11210 () 2177621..2177980 + 360 Protein_2014 IS66 family transposase ISCro1 Transposase
C6N22_RS11215 () 2178007..2178216 - 210 WP_000323309.1 hypothetical protein -
C6N22_RS11220 () 2178250..2178441 - 192 WP_000264910.1 hypothetical protein -
C6N22_RS11225 () 2178451..2178816 - 366 WP_096988538.1 hypothetical protein -
C6N22_RS11235 () 2179322..2183413 - 4092 WP_106904071.1 hypothetical protein VF
C6N22_RS26320 () 2184312..2185049 - 738 Protein_2019 AraC family transcriptional regulator -
C6N22_RS11255 () 2186003..2186315 - 313 Protein_2020 IS66 family insertion sequence element accessory protein TnpB -
C6N22_RS11260 () 2186302..2186510 - 209 Protein_2021 IS66 family insertion sequence element accessory protein TnpB -
C6N22_RS11265 () 2187186..2188322 + 1137 WP_001228923.1 tRNA U34 carboxymethyltransferase VF
C6N22_RS11270 () 2188417..2190114 + 1698 WP_000401036.1 sulfatase -
C6N22_RS11275 () 2190183..2190440 + 258 WP_001032733.1 hypothetical protein -
C6N22_RS11285 () 2191341..2193185 + 1845 WP_000593011.1 Aspartate--tRNA ligase VF
C6N22_RS11290 () 2193199..2193390 + 192 Protein_2026 IS256 family transposase ISEic2 Transposase
C6N22_RS11295 () 2193531..2195618 - 2088 WP_001223359.1 bifunctional siderophore receptor/adhesin Iha -
C6N22_RS11310 () 2198333..2198554 + 222 WP_050866885.1 hypothetical protein -
C6N22_RS26325 () 2199199..2199535 + 337 Protein_2030 hypothetical protein -
C6N22_RS11320 () 2200327..2200520 - 194 Protein_2031 hypothetical protein -
C6N22_RS26330 () 2200572..2200751 - 180 WP_071531291.1 hypothetical protein -
C6N22_RS11340 () 2201840..2202496 + 657 Protein_2033 IS66 family transposase ISEc23 Transposase
C6N22_RS11350 () 2202906..2204090 - 1185 WP_000786522.1 acetyl-CoA acetyltransferase -
C6N22_RS11355 () 2204121..2205443 - 1323 WP_000580275.1 TIGR00366 family protein -
C6N22_RS11360 () 2205440..2206090 - 651 WP_000339054.1 acetate CoA-transferase subunit beta -
C6N22_RS11365 () 2206090..2206752 - 663 WP_000850528.1 acetate CoA-transferase subunit alpha -
C6N22_RS11370 () 2206948..2208333 - 1386 WP_000125284.1 acetoacetate metabolism transcriptional regulator AtoC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance