MGE detailed information
MGE type: Genomic_island MGE length: 11562 bp
Accession: NZ_CP027255 Location: 1078758..1090319 Organism: Escherichia coli strain EC11 Replicon: chromosome
Accession: NZ_CP027255 Location: 1078758..1090319 Organism: Escherichia coli strain EC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6C13_RS05480 () | 1075083..1076291 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| C6C13_RS05485 () | 1076317..1077648 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| C6C13_RS05490 () | 1077670..1078659 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C6C13_RS05500 () | 1078758..1079696 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| C6C13_RS27120 () | 1080011..1080229 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| C6C13_RS05510 () | 1080485..1081024 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| C6C13_RS05515 () | 1081046..1082233 | + | 1188 | WP_000484573.1 | YhaC family protein | - |
| C6C13_RS05525 () | 1083143..1084288 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| C6C13_RS05530 () | 1084385..1085275 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C6C13_RS05535 () | 1085305..1086075 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C6C13_RS05540 () | 1086091..1087425 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C6C13_RS05545 () | 1087800..1089371 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| C6C13_RS05550 () | 1089520..1089855 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C6C13_RS05555 () | 1089855..1090319 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C6C13_RS05560 () | 1090374..1091183 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| C6C13_RS05570 () | 1091432..1092712 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C6C13_RS05575 () | 1092735..1093208 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C6C13_RS05580 () | 1093219..1093998 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C6C13_RS05585 () | 1093988..1094866 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C6C13_RS05590 () | 1094884..1095318 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|