MGE detailed information
MGE type: Mobilizable plasmid MGE length: 54399 bp
Accession: NZ_CP027120 Location: 1..54399 Organism: Escherichia coli strain 26561 Replicon: plasmid unnamed2
Accession: NZ_CP027120 Location: 1..54399 Organism: Escherichia coli strain 26561 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYQ10_RS25630 () | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| CYQ10_RS24940 () | 1772..2041 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| CYQ10_RS24945 () | 2038..2319 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CYQ10_RS24950 () | 2365..3212 | + | 848 | Protein_4 | 3'-5' exonuclease | - |
| CYQ10_RS24955 () | 3329..3811 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| CYQ10_RS24960 () | 3840..5324 | - | 1485 | WP_016240487.1 | IS5 family transposase | - |
| CYQ10_RS24965 () | 5404..6279 | - | 876 | WP_001617865.1 | class A extended-spectrum beta-lactamase CTX-M-14 | - |
| CYQ10_RS24970 () | 6529..7791 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| CYQ10_RS24975 () | 8135..9322 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| CYQ10_RS24980 () | 9379..10140 | - | 762 | WP_000020504.1 | ABC transporter ATP-binding protein | - |
| CYQ10_RS24985 () | 10140..11177 | - | 1038 | WP_001545318.1 | iron ABC transporter permease | - |
| CYQ10_RS24990 () | 11177..12174 | - | 998 | Protein_12 | ABC transporter substrate-binding protein | - |
| CYQ10_RS24995 () | 12324..12482 | - | 159 | Protein_13 | integrase core domain-containing protein | - |
| CYQ10_RS25000 () | 12525..12767 | - | 243 | Protein_14 | helix-turn-helix domain-containing protein | - |
| CYQ10_RS25010 () | 13025..13375 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| CYQ10_RS25015 () | 13378..14340 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| CYQ10_RS25020 () | 14487..14780 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| CYQ10_RS25775 () | 15420..16091 | + | 672 | WP_199853651.1 | hypothetical protein | - |
| CYQ10_RS25040 () | 16630..16932 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| CYQ10_RS25045 () | 16979..17401 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| CYQ10_RS25635 () | 17398..17588 | + | 191 | Protein_21 | hypothetical protein | - |
| CYQ10_RS25060 () | 18625..18855 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| CYQ10_RS25065 () | 18907..20268 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| CYQ10_RS25070 () | 20313..20876 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| CYQ10_RS25075 () | 21028..21288 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| CYQ10_RS25095 () | 21761..22282 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| CYQ10_RS25100 () | 22441..23688 | + | 1248 | WP_000414651.1 | site-specific integrase | - |
| CYQ10_RS25105 () | 23675..25212 | + | 1538 | Protein_28 | recombinase | - |
| CYQ10_RS25110 () | 25229..27261 | + | 2033 | Protein_29 | integrase | - |
| CYQ10_RS25120 () | 27960..28220 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| CYQ10_RS25140 () | 28693..29214 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| CYQ10_RS25145 () | 29373..30620 | + | 1248 | WP_000414651.1 | site-specific integrase | - |
| CYQ10_RS25150 () | 30607..32144 | + | 1538 | Protein_33 | recombinase | - |
| CYQ10_RS25155 () | 32161..34193 | + | 2033 | Protein_34 | integrase | - |
| CYQ10_RS25780 () | 34186..34605 | + | 420 | WP_001062122.1 | hypothetical protein | - |
| CYQ10_RS25170 () | 34748..35445 | + | 698 | Protein_36 | IS1 family transposase | - |
| CYQ10_RS25175 () | 35455..40221 | + | 4767 | WP_061362265.1 | ATP-binding protein | - |
| CYQ10_RS25185 () | 40760..41581 | - | 822 | WP_001272932.1 | hypothetical protein | - |
| CYQ10_RS25195 () | 41945..42178 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| CYQ10_RS25200 () | 42242..42568 | + | 327 | Protein_40 | ParB/Srx family N-terminal domain-containing protein | - |
| CYQ10_RS25205 () | 42564..42770 | + | 207 | Protein_41 | plasmid SOS inhibition protein A | - |
| CYQ10_RS25210 () | 42767..43081 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 43030..43237 | + | 208 | NuclAT_0 | - | - |
| - () | 43030..43237 | + | 208 | NuclAT_0 | - | - |
| - () | 43030..43237 | + | 208 | NuclAT_0 | - | - |
| - () | 43030..43237 | + | 208 | NuclAT_0 | - | - |
| CYQ10_RS25215 () | 43290..43451 | + | 162 | WP_012881135.1 | type I toxin-antitoxin system Hok family toxin | - |
| CYQ10_RS25785 () | 43688..43957 | - | 270 | WP_001388591.1 | hypothetical protein | - |
| CYQ10_RS25235 () | 44296..44619 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| CYQ10_RS25240 () | 44678..44920 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| CYQ10_RS25790 () | 45019..45275 | + | 257 | Protein_47 | hypothetical protein | - |
| CYQ10_RS25250 () | 45185..45445 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| CYQ10_RS25270 () | 45916..46212 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CYQ10_RS25275 () | 46322..47143 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| CYQ10_RS25280 () | 47439..48041 | - | 603 | WP_000243715.1 | transglycosylase SLT domain-containing protein | - |
| CYQ10_RS25290 () | 48364..48747 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| CYQ10_RS25295 () | 48941..49612 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| CYQ10_RS25300 () | 49749..49976 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| CYQ10_RS25305 () | 50009..50368 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| CYQ10_RS25310 () | 50383..50694 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| CYQ10_RS25315 () | 50716..51282 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CYQ10_RS25320 () | 51325..52110 | + | 786 | WP_159042778.1 | type-F conjugative transfer system secretin TraK | - |
| CYQ10_RS25325 () | 52162..52380 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| CYQ10_RS25640 () | 52408..52755 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| CYQ10_RS25335 () | 52881..53273 | + | 393 | Protein_61 | TraC family protein | - |
| CYQ10_RS25340 () | 53413..53601 | + | 189 | Protein_62 | DUF2726 domain-containing protein | - |
| CYQ10_RS25345 () | 53841..54095 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|