MGE detailed information
MGE type: Prophage MGE length: 24282 bp
Accession: NZ_CP027105 Location: 2279777..2304058 Organism: Escherichia coli strain RM14721 Replicon: chromosome
Accession: NZ_CP027105 Location: 2279777..2304058 Organism: Escherichia coli strain RM14721 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5097_RS25095 () | 2275115..2275237 | + | 123 | WP_120795387.1 | protein YneP | - |
| C5097_RS11960 () | 2275203..2276360 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| C5097_RS11965 () | 2276412..2278094 | - | 1683 | WP_001295684.1 | sulfatase | - |
| C5097_RS11970 () | 2278496..2279257 | - | 762 | WP_106668485.1 | acid stress response transcriptional regulator YdeO | - |
| C5097_RS11975 () | 2279332..2279529 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| C5097_RS11980 () | 2279777..2282056 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| C5097_RS11985 () | 2282390..2283304 | - | 915 | WP_000520675.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| C5097_RS11990 () | 2283363..2283866 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| C5097_RS11995 () | 2283879..2284409 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| C5097_RS12000 () | 2284423..2285649 | - | 1227 | Protein_2150 | Outer membrane usher protein FimD | VF |
| C5097_RS12005 () | 2285904..2286100 | - | 197 | Protein_2151 | AraC family transcriptional regulator | - |
| C5097_RS12015 () | 2286155..2286852 | + | 698 | Protein_2152 | IS1 family transposase IS1S | Transposase |
| C5097_RS12030 () | 2287957..2289177 | - | 1221 | WP_158701378.1 | type II secretion system protein GspD | - |
| C5097_RS12040 () | 2289187..2290449 | - | 1263 | WP_106668488.1 | zonular occludens toxin family protein | - |
| C5097_RS12045 () | 2290457..2290771 | - | 315 | WP_001409622.1 | hypothetical protein | - |
| C5097_RS12050 () | 2290819..2292147 | - | 1329 | WP_106668489.1 | phage coat protein | - |
| C5097_RS12055 () | 2292203..2292478 | - | 276 | WP_001408028.1 | hypothetical protein | - |
| C5097_RS25320 () | 2292499..2292657 | - | 159 | WP_032219750.1 | hypothetical protein | - |
| C5097_RS12060 () | 2292772..2293107 | - | 336 | WP_106668490.1 | type II/III secretion system domain protein | - |
| C5097_RS12065 () | 2293117..2293788 | - | 672 | Protein_2160 | replication initiation factor domain-containing protein | - |
| C5097_RS12075 () | 2293846..2294543 | + | 698 | Protein_2161 | IS1 family transposase IS1S | Transposase |
| C5097_RS12080 () | 2294560..2295090 | - | 531 | Protein_2162 | replication initiation protein | - |
| C5097_RS12085 () | 2295090..2295287 | - | 198 | WP_000017777.1 | hypothetical protein | - |
| C5097_RS12090 () | 2295425..2295637 | + | 213 | WP_000712390.1 | hypothetical protein | - |
| C5097_RS25325 () | 2295916..2296089 | + | 174 | WP_001409659.1 | hypothetical protein | - |
| C5097_RS12095 () | 2296264..2297586 | - | 1323 | WP_089588309.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| C5097_RS12100 () | 2297586..2297852 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| C5097_RS12110 () | 2298075..2302342 | - | 4268 | Protein_2168 | hypothetical protein | VF |
| C5097_RS12120 () | 2302386..2303083 | + | 698 | Protein_2169 | IS1 family transposase | - |
| C5097_RS12125 () | 2303095..2303304 | - | 210 | Protein_2170 | hypothetical protein | - |
| C5097_RS12130 () | 2303361..2304058 | + | 698 | Protein_2171 | IS1 family transposase IS1S | Transposase |
| C5097_RS12135 () | 2304549..2306141 | - | 1593 | WP_106668492.1 | autoinducer-2 kinase | - |
| C5097_RS12140 () | 2306220..2307173 | - | 954 | WP_086625498.1 | transcriptional regulator LsrR | - |
| C5097_RS12145 () | 2307422..2308957 | + | 1536 | WP_001194916.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|