MGE detailed information
MGE type: Genomic_island MGE length: 25531 bp
Accession: NZ_CP026981 Location: 1449160..1474690 Organism: Pectobacterium parmentieri strain IFB5485 Replicon: chromosome
Accession: NZ_CP026981 Location: 1449160..1474690 Organism: Pectobacterium parmentieri strain IFB5485 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E21_RS06820 () | 1444698..1445645 | + | 948 | WP_014699058.1 | omptin family outer membrane protease | - |
| C5E21_RS06825 () | 1445759..1446124 | + | 366 | WP_014699059.1 | DUF4751 family protein | - |
| C5E21_RS06830 () | 1446222..1447253 | - | 1032 | WP_014699060.1 | methionine synthase | - |
| C5E21_RS06835 () | 1447281..1448258 | - | 978 | WP_014699061.1 | DUF1852 domain-containing protein | - |
| C5E21_RS06840 () | 1448738..1448980 | - | 243 | WP_103808481.1 | GIY-YIG nuclease family protein | - |
| C5E21_RS06845 () | 1449127..1449585 | + | 459 | WP_071822844.1 | NUDIX domain-containing protein | - |
| C5E21_RS06850 () | 1449658..1450227 | + | 570 | WP_014699063.1 | TetR family transcriptional regulator | - |
| C5E21_RS06855 () | 1450290..1450760 | + | 471 | Protein_1309 | nuclear transport factor 2 family protein | - |
| C5E21_RS06860 () | 1450850..1451269 | - | 420 | WP_081439987.1 | IS3 family transposase ISStau1 | Transposase |
| C5E21_RS06865 () | 1451429..1451719 | - | 291 | WP_014699065.1 | IS3 family transposase ISHar2 | Transposase |
| C5E21_RS06870 () | 1451785..1452114 | + | 330 | Protein_1312 | IS30 family transposase | - |
| C5E21_RS06875 () | 1452288..1452917 | - | 630 | WP_103808445.1 | hypothetical protein | - |
| C5E21_RS06880 () | 1453348..1454562 | - | 1215 | WP_103808444.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5E21_RS22760 () | 1454923..1455093 | - | 171 | WP_155116481.1 | hypothetical protein | - |
| C5E21_RS06885 () | 1455275..1456108 | - | 834 | WP_103808443.1 | DUF4942 domain-containing protein | - |
| C5E21_RS06890 () | 1456226..1456546 | - | 321 | WP_103808442.1 | TA system toxin CbtA family protein | Toxin Detail |
| C5E21_RS06895 () | 1456616..1456951 | - | 336 | WP_103808441.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C5E21_RS06900 () | 1456988..1457461 | - | 474 | WP_121247002.1 | DNA repair protein RadC | - |
| C5E21_RS06905 () | 1457546..1457779 | - | 234 | WP_040034648.1 | membrane protein | - |
| C5E21_RS06910 () | 1457797..1458270 | - | 474 | WP_103808732.1 | hypothetical protein | - |
| C5E21_RS06915 () | 1458306..1458875 | - | 570 | Protein_1322 | hypothetical protein | - |
| C5E21_RS06920 () | 1459057..1459755 | - | 699 | WP_121247005.1 | DeoR family transcriptional regulator | - |
| C5E21_RS06925 () | 1460125..1461000 | - | 876 | WP_103808734.1 | GTPase family protein | - |
| C5E21_RS06930 () | 1461089..1462006 | - | 918 | WP_103808735.1 | hypothetical protein | - |
| C5E21_RS06935 () | 1462509..1462721 | + | 213 | WP_103808736.1 | AlpA family phage regulatory protein | - |
| C5E21_RS06940 () | 1462827..1463360 | + | 534 | WP_103808737.1 | secretoglobin family protein | - |
| C5E21_RS06945 () | 1463370..1463748 | + | 379 | Protein_1328 | hypothetical protein | - |
| C5E21_RS06950 () | 1464133..1464744 | + | 612 | WP_103808745.1 | inovirus Gp2 family protein | - |
| C5E21_RS06955 () | 1465125..1467014 | + | 1890 | WP_103808738.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| C5E21_RS06960 () | 1467237..1467773 | + | 537 | WP_103808739.1 | hypothetical protein | - |
| C5E21_RS06965 () | 1467783..1469465 | + | 1683 | WP_103808740.1 | hypothetical protein | - |
| C5E21_RS06970 () | 1470200..1470706 | - | 507 | WP_103808741.1 | hypothetical protein | - |
| C5E21_RS06975 () | 1470693..1471577 | - | 885 | WP_103808742.1 | hypothetical protein | - |
| C5E21_RS06980 () | 1472024..1474690 | - | 2667 | WP_146052179.1 | hypothetical protein | - |
| C5E21_RS06985 () | 1475198..1476412 | - | 1215 | WP_121247008.1 | tyrosine-type recombinase/integrase | - |
| C5E21_RS06995 () | 1477099..1479552 | + | 2454 | WP_103808086.1 | mechanosensitive ion channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|