MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7752 bp
Accession: NZ_CP026979 Location: 3633453..3641204 Organism: Pectobacterium parmentieri strain IFB5432 Replicon: chromosome
Accession: NZ_CP026979 Location: 3633453..3641204 Organism: Pectobacterium parmentieri strain IFB5432 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E19_RS23945 () | 3628511..3629101 | + | 591 | WP_198339833.1 | hypothetical protein | - |
| C5E19_RS17030 () | 3629085..3630038 | + | 954 | WP_198339834.1 | DUF4868 domain-containing protein | - |
| C5E19_RS17035 () | 3630178..3631899 | - | 1722 | WP_121265914.1 | DUF87 domain-containing protein | - |
| C5E19_RS17040 () | 3631910..3632923 | - | 1014 | WP_121265916.1 | SIR2 family protein | - |
| C5E19_RS17045 () | 3633636..3634895 | + | 1260 | WP_121265918.1 | hypothetical protein ; Integrase | Integrase |
| C5E19_RS17050 () | 3635002..3635196 | - | 195 | WP_039525031.1 | DUF3950 domain-containing protein | - |
| C5E19_RS17055 () | 3635382..3635723 | + | 342 | WP_025919584.1 | hypothetical protein | - |
| C5E19_RS23785 () | 3636316..3636486 | - | 171 | WP_162939939.1 | hypothetical protein | - |
| C5E19_RS17065 () | 3636628..3637371 | + | 744 | WP_121265922.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C5E19_RS17070 () | 3637430..3637648 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5E19_RS17075 () | 3637651..3637956 | + | 306 | WP_121265924.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5E19_RS17080 () | 3638285..3638671 | + | 387 | WP_121265926.1 | hypothetical protein | - |
| C5E19_RS23790 () | 3638664..3638885 | + | 222 | WP_121268934.1 | hypothetical protein | - |
| C5E19_RS17085 () | 3639147..3639641 | - | 495 | WP_121265928.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5E19_RS17090 () | 3639638..3639931 | - | 294 | WP_121265930.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5E19_RS17095 () | 3640119..3640805 | - | 687 | WP_121265932.1 | DNA primase | - |
| C5E19_RS17100 () | 3641368..3642597 | + | 1230 | WP_121265934.1 | tyrosine-type recombinase/integrase | - |
| C5E19_RS17105 () | 3642631..3642894 | + | 264 | WP_121265936.1 | XRE family transcriptional regulator | - |
| C5E19_RS17110 () | 3642894..3643126 | + | 233 | Protein_3278 | hypothetical protein | - |
| C5E19_RS17115 () | 3643301..3645271 | + | 1971 | WP_121265938.1 | acyltransferase | - |
| C5E19_RS17120 () | 3645437..3645730 | - | 294 | Protein_3280 | IS3 family transposase | - |
| C5E19_RS17125 () | 3645730..3645834 | + | 105 | Protein_3281 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|