MGE detailed information
MGE type: Genomic_island MGE length: 26719 bp
Accession: NZ_CP026939 Location: 4266668..4293386 Organism: Escherichia coli strain CFS3313 Replicon: chromosome
Accession: NZ_CP026939 Location: 4266668..4293386 Organism: Escherichia coli strain CFS3313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F74_RS20395 () | 4262147..4262650 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| C5F74_RS20400 () | 4262663..4263193 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| C5F74_RS20405 () | 4263203..4265839 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| C5F74_RS20410 () | 4265906..4266631 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| C5F74_RS20415 () | 4266668..4267207 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| C5F74_RS20420 () | 4267272..4267820 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| C5F74_RS20425 () | 4268302..4268898 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| C5F74_RS20430 () | 4269376..4269978 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C5F74_RS20435 () | 4271434..4272150 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C5F74_RS20440 () | 4272170..4273276 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| C5F74_RS20445 () | 4273341..4274321 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C5F74_RS20450 () | 4274904..4275890 | - | 987 | WP_001323209.1 | hypothetical protein | - |
| C5F74_RS20455 () | 4276260..4276505 | + | 246 | Protein_4003 | GNAT family N-acetyltransferase | - |
| C5F74_RS20460 () | 4276882..4277139 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| C5F74_RS20465 () | 4277151..4277696 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| C5F74_RS20470 () | 4277752..4278498 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| C5F74_RS20475 () | 4278667..4278885 | + | 219 | Protein_4007 | hypothetical protein | - |
| C5F74_RS20480 () | 4279284..4280405 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| C5F74_RS20485 () | 4280402..4280680 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| C5F74_RS20490 () | 4280692..4282005 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| C5F74_RS20495 () | 4282018..4282824 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| C5F74_RS20500 () | 4282955..4283386 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| C5F74_RS20505 () | 4283398..4284030 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| C5F74_RS20510 () | 4284047..4284829 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| C5F74_RS20515 () | 4285132..4285920 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| C5F74_RS20520 () | 4285925..4286830 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| C5F74_RS20525 () | 4286841..4288808 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| C5F74_RS20530 () | 4288915..4290264 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| C5F74_RS20535 () | 4290611..4291597 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| C5F74_RS20540 () | 4291638..4292504 | - | 867 | WP_071587474.1 | multidrug DMT transporter permease | - |
| C5F74_RS20545 () | 4292745..4293386 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| C5F74_RS20550 () | 4293417..4294532 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| C5F74_RS20555 () | 4294542..4295801 | - | 1260 | WP_021548606.1 | S-methyl-5-thioribose kinase | - |
| C5F74_RS20560 () | 4296409..4296609 | - | 201 | WP_112022106.1 | TA system toxin CbtA family protein | - |
| C5F74_RS20565 () | 4296790..4298331 | + | 1542 | WP_001518966.1 | IS21-like element ISEc12 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|