MGE detailed information
MGE type: Genomic_island MGE length: 22076 bp
Accession: NZ_CP026935 Location: 668800..690875 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Accession: NZ_CP026935 Location: 668800..690875 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F72_RS03235 () | 664415..664999 | - | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| C5F72_RS03240 () | 665400..666155 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| C5F72_RS03245 () | 666156..666947 | - | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| C5F72_RS03250 () | 666937..667629 | - | 693 | Protein_638 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C5F72_RS03255 () | 667774..668754 | - | 981 | WP_000019448.1 | IS5-like element ISKpn26 family transposase | - |
| C5F72_RS27425 () | 668824..668940 | - | 117 | Protein_640 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C5F72_RS03260 () | 668979..669455 | - | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C5F72_RS03265 () | 669622..670482 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| C5F72_RS03270 () | 670495..671649 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| C5F72_RS03275 () | 672000..673133 | - | 1134 | WP_001326623.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| C5F72_RS03280 () | 673130..673564 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| C5F72_RS03285 () | 673582..674460 | - | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C5F72_RS03290 () | 674450..675229 | - | 780 | WP_000406209.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C5F72_RS03295 () | 675240..675713 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C5F72_RS03300 () | 675736..677016 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C5F72_RS03305 () | 677265..678074 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| C5F72_RS03310 () | 678129..678593 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C5F72_RS03315 () | 678593..678928 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C5F72_RS03320 () | 679077..680648 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| C5F72_RS03325 () | 681023..682357 | + | 1335 | WP_061093123.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C5F72_RS03330 () | 682373..683143 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C5F72_RS03335 () | 683173..684063 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C5F72_RS03340 () | 684160..685305 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| C5F72_RS03350 () | 686328..687134 | - | 807 | Protein_658 | hypothetical protein | - |
| C5F72_RS03355 () | 687144..688115 | - | 972 | WP_170386723.1 | IS30-like element ISApl1 family transposase | - |
| C5F72_RS03360 () | 688201..688587 | - | 387 | Protein_660 | hypothetical protein | - |
| C5F72_RS03365 () | 688609..689148 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| C5F72_RS03370 () | 689404..689748 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| C5F72_RS03375 () | 689937..690875 | + | 939 | WP_069915133.1 | transcriptional regulator TdcA | - |
| C5F72_RS03380 () | 690974..691963 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C5F72_RS03385 () | 691985..693316 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| C5F72_RS03390 () | 693342..694550 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|