MGE detailed information
MGE type: Genomic_island MGE length: 117158 bp
Accession: NZ_CP026932 Location: 944522..1061679 Organism: Escherichia coli strain CFS3273 Replicon: chromosome
Accession: NZ_CP026932 Location: 944522..1061679 Organism: Escherichia coli strain CFS3273 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F73_RS04515 () | 943989..944243 | + | 255 | WP_040088721.1 | hypothetical protein | - |
| C5F73_RS04520 () | 944717..945675 | + | 959 | Protein_889 | VENN motif pre-toxin domain-containing protein | - |
| C5F73_RS04525 () | 945797..946351 | - | 555 | WP_159373453.1 | DDE-type integrase/transposase/recombinase | - |
| C5F73_RS04530 () | 946350..946775 | + | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
| C5F73_RS04535 () | 946772..947122 | + | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F73_RS04540 () | 947153..948766 | + | 1614 | WP_001366169.1 | IS66-like element ISEc23 family transposase | - |
| C5F73_RS04545 () | 948793..949152 | - | 360 | WP_159373419.1 | helix-turn-helix domain-containing protein | - |
| C5F73_RS04550 () | 949284..949544 | - | 261 | WP_097502127.1 | transposase | - |
| C5F73_RS04555 () | 949945..950304 | + | 360 | WP_021578766.1 | DUF596 domain-containing protein | - |
| C5F73_RS04560 () | 950282..950619 | + | 338 | Protein_897 | hypothetical protein | - |
| C5F73_RS04565 () | 951140..952108 | - | 969 | WP_000654804.1 | IS5-like element IS903B family transposase | - |
| C5F73_RS04570 () | 952450..954648 | + | 2199 | WP_087050275.1 | ornithine decarboxylase SpeF | - |
| C5F73_RS04575 () | 954645..955961 | + | 1317 | WP_021578763.1 | putrescine-ornithine antiporter | - |
| C5F73_RS04580 () | 956234..956931 | + | 698 | Protein_901 | IS1-like element IS1A family transposase | - |
| C5F73_RS04585 () | 957061..957588 | + | 528 | WP_077883261.1 | helix-turn-helix domain-containing protein | - |
| C5F73_RS04590 () | 957998..958354 | - | 357 | WP_077874915.1 | PerC family transcriptional regulator | - |
| C5F73_RS04595 () | 958339..958977 | - | 639 | WP_021578756.1 | ParB/RepB/Spo0J family partition protein | - |
| C5F73_RS04600 () | 958962..960191 | - | 1230 | WP_021578757.1 | phosphoadenosine phosphosulfate reductase | - |
| C5F73_RS04605 () | 960434..961169 | - | 736 | Protein_906 | AraC family transcriptional regulator | - |
| C5F73_RS04610 () | 961325..961897 | - | 573 | WP_001315613.1 | YfdX family protein | - |
| C5F73_RS04615 () | 962256..962933 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| C5F73_RS04620 () | 962933..963280 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F73_RS04625 () | 963300..964871 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| C5F73_RS04630 () | 965415..965636 | - | 222 | WP_000545701.1 | hypothetical protein | - |
| C5F73_RS04635 () | 965651..965842 | - | 192 | WP_001279436.1 | hypothetical protein | - |
| C5F73_RS04640 () | 965955..966989 | - | 1035 | WP_061363424.1 | F17G fimbrial adhesin | - |
| C5F73_RS04645 () | 966991..969459 | - | 2469 | WP_063714309.1 | fimbrial biogenesis outer membrane usher protein | - |
| C5F73_RS04650 () | 969543..970265 | - | 723 | WP_021520533.1 | fimbria/pilus periplasmic chaperone | - |
| C5F73_RS04655 () | 970333..970878 | - | 546 | WP_021520534.1 | F17A fimbrial adhesin | - |
| C5F73_RS04660 () | 972199..972896 | - | 698 | Protein_917 | IS1 family transposase | - |
| C5F73_RS04665 () | 973587..974150 | - | 564 | Protein_918 | IS110 family transposase | - |
| C5F73_RS04670 () | 974527..975755 | + | 1229 | WP_089541817.1 | IS3 family transposase | - |
| C5F73_RS04680 () | 977990..978559 | - | 570 | WP_000517640.1 | hypothetical protein | - |
| C5F73_RS04685 () | 978660..979892 | - | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| C5F73_RS04690 () | 980043..981204 | - | 1162 | Protein_923 | IS3 family transposase | - |
| C5F73_RS04695 () | 981372..982352 | + | 981 | WP_000174033.1 | thymidylate synthase | - |
| C5F73_RS04700 () | 982349..983293 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| C5F73_RS04705 () | 983296..984378 | - | 1083 | WP_000637420.1 | XRE family transcriptional regulator | - |
| C5F73_RS04710 () | 984845..985108 | + | 264 | WP_000676590.1 | MazG-like family protein | - |
| C5F73_RS04715 () | 985411..985925 | - | 515 | Protein_928 | transposase | - |
| C5F73_RS04720 () | 986533..989946 | + | 3414 | WP_000438168.1 | DEAD/DEAH box helicase family protein | - |
| C5F73_RS04725 () | 990010..991644 | + | 1635 | WP_000627725.1 | type I restriction-modification system subunit M | - |
| C5F73_RS04730 () | 991641..992759 | + | 1119 | WP_000742121.1 | restriction endonuclease subunit S | - |
| C5F73_RS04735 () | 992884..994473 | - | 1590 | WP_001009620.1 | SIR2 family protein | - |
| C5F73_RS04740 () | 994864..995034 | - | 171 | WP_001315830.1 | hypothetical protein | - |
| C5F73_RS04745 () | 995326..995694 | + | 369 | WP_001275820.1 | hypothetical protein | - |
| C5F73_RS04750 () | 995912..996652 | + | 741 | WP_001045031.1 | porin family protein | - |
| C5F73_RS04755 () | 996834..998336 | + | 1503 | WP_061355068.1 | phosphoethanolamine transferase | - |
| C5F73_RS04760 () | 998695..999738 | - | 1044 | WP_061355067.1 | hypothetical protein | - |
| C5F73_RS04765 () | 999994..1001259 | - | 1266 | WP_001218795.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C5F73_RS04770 () | 1001723..1002049 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5F73_RS04775 () | 1002046..1002309 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C5F73_RS04780 () | 1002381..1003247 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| C5F73_RS04785 () | 1003332..1003529 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| C5F73_RS04790 () | 1003541..1004029 | - | 489 | WP_000761677.1 | hypothetical protein | - |
| C5F73_RS04795 () | 1004026..1004403 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| C5F73_RS04800 () | 1004450..1004824 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C5F73_RS04805 () | 1004904..1005125 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| C5F73_RS04810 () | 1005188..1005664 | - | 477 | WP_001366855.1 | RadC family protein | - |
| C5F73_RS04815 () | 1005680..1006159 | - | 480 | WP_000844100.1 | antirestriction protein | - |
| C5F73_RS04820 () | 1006241..1007059 | - | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| C5F73_RS04825 () | 1007149..1007382 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| C5F73_RS04830 () | 1007388..1008065 | - | 678 | WP_001562086.1 | hypothetical protein | - |
| C5F73_RS04835 () | 1008184..1009068 | - | 885 | WP_000010403.1 | 50S ribosome-binding GTPase | - |
| C5F73_RS04840 () | 1009253..1010383 | + | 1131 | WP_000147744.1 | hypothetical protein | - |
| C5F73_RS04845 () | 1011927..1012148 | + | 222 | Protein_954 | inovirus Gp2 family protein | - |
| C5F73_RS04850 () | 1012177..1013748 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| C5F73_RS04855 () | 1013768..1014115 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5F73_RS04860 () | 1014115..1014792 | - | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| C5F73_RS04865 () | 1014754..1015365 | + | 612 | WP_100069941.1 | inovirus-type Gp2 protein | - |
| C5F73_RS04870 () | 1015722..1016294 | + | 573 | WP_000991602.1 | hypothetical protein | - |
| C5F73_RS04875 () | 1016363..1016599 | + | 237 | WP_000958153.1 | AlpA family transcriptional regulator | - |
| C5F73_RS04880 () | 1016800..1017348 | + | 549 | WP_001167455.1 | hypothetical protein | - |
| C5F73_RS04885 () | 1017366..1017614 | - | 249 | WP_001323514.1 | osmoprotectant transport activator ProQ | - |
| C5F73_RS04890 () | 1017683..1017874 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| C5F73_RS04895 () | 1018277..1018968 | - | 692 | Protein_964 | IS1 family transposase | - |
| C5F73_RS04900 () | 1019028..1019204 | + | 177 | Protein_965 | transketolase family protein | - |
| C5F73_RS04905 () | 1019467..1019580 | + | 114 | WP_032346664.1 | transposase | - |
| C5F73_RS04910 () | 1020404..1020910 | + | 507 | Protein_967 | Tat pathway signal sequence protein | - |
| C5F73_RS04915 () | 1021110..1021187 | - | 78 | Protein_968 | transcriptional regulator | - |
| C5F73_RS04920 () | 1021214..1022029 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| C5F73_RS04925 () | 1022116..1022397 | + | 282 | WP_001323507.1 | hypothetical protein | - |
| C5F73_RS04930 () | 1022406..1022993 | + | 588 | WP_000949574.1 | trimethoprim-resistant dihydrofolate reductase DfrA36 | - |
| C5F73_RS04935 () | 1023385..1023831 | + | 447 | WP_000494235.1 | Rrf2 family transcriptional regulator | - |
| C5F73_RS04940 () | 1023855..1024040 | + | 186 | WP_085970005.1 | 6-carboxytetrahydropterin synthase | - |
| C5F73_RS04945 () | 1024034..1024237 | - | 204 | Protein_974 | hypothetical protein | - |
| C5F73_RS04950 () | 1024268..1025761 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| C5F73_RS04955 () | 1025873..1026178 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| C5F73_RS04960 () | 1026206..1027420 | - | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| C5F73_RS04965 () | 1027637..1028359 | - | 723 | WP_032280752.1 | DUF3363 domain-containing protein | - |
| C5F73_RS04970 () | 1028361..1031327 | - | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| C5F73_RS04975 () | 1031330..1031890 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| C5F73_RS04980 () | 1032016..1032366 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| C5F73_RS04985 () | 1032569..1033582 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| C5F73_RS04990 () | 1033747..1034280 | + | 534 | WP_000381802.1 | aminoglycoside nucleotidyltransferase ANT(2'')-Ia | - |
| C5F73_RS04995 () | 1034338..1035129 | + | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| C5F73_RS05000 () | 1035409..1036452 | - | 1044 | WP_032280803.1 | IS110 family transposase | - |
| C5F73_RS05005 () | 1036673..1037020 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| C5F73_RS05010 () | 1037014..1037853 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| C5F73_RS05015 () | 1037981..1038214 | + | 234 | WP_000376618.1 | hypothetical protein | - |
| C5F73_RS05020 () | 1038267..1039805 | - | 1539 | WP_000287612.1 | IS3 family transposase | - |
| C5F73_RS05025 () | 1039887..1040669 | - | 783 | WP_001163403.1 | IS21-like element IS1326 family helper ATPase IstB | - |
| C5F73_RS05030 () | 1040659..1042182 | - | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| C5F73_RS05035 () | 1042277..1042525 | + | 249 | WP_001176634.1 | MerR family DNA-binding protein | - |
| C5F73_RS05040 () | 1042515..1042757 | - | 243 | WP_001347502.1 | hypothetical protein | - |
| C5F73_RS05045 () | 1042788..1043756 | - | 969 | WP_072161421.1 | transposase | - |
| C5F73_RS05050 () | 1043892..1044470 | + | 579 | Protein_995 | restriction endonuclease subunit S | - |
| C5F73_RS26785 () | 1044717..1044863 | - | 147 | WP_001324285.1 | hypothetical protein | - |
| C5F73_RS05055 () | 1045532..1046452 | + | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| C5F73_RS05060 () | 1046620..1048137 | + | 1518 | WP_000277213.1 | carbohydrate porin | - |
| C5F73_RS05065 () | 1048198..1049568 | + | 1371 | WP_000344909.1 | sucrose-specific PTS transporter subunit IIBC | - |
| C5F73_RS05070 () | 1049568..1050977 | + | 1410 | WP_001324288.1 | sucrose-6-phosphate hydrolase | - |
| C5F73_RS05075 () | 1051003..1052010 | + | 1008 | WP_001232703.1 | LacI family DNA-binding transcriptional regulator | - |
| C5F73_RS05080 () | 1052562..1053035 | - | 474 | WP_000335225.1 | H-NS histone family protein | - |
| C5F73_RS05085 () | 1053354..1054091 | + | 738 | WP_001389182.1 | porin family protein | - |
| C5F73_RS05090 () | 1054511..1055407 | + | 897 | WP_000785678.1 | WYL domain-containing protein | - |
| C5F73_RS05095 () | 1055456..1056535 | + | 1080 | WP_001218335.1 | hypothetical protein | - |
| C5F73_RS05100 () | 1056582..1058153 | + | 1572 | WP_001100181.1 | ATP--cob(I)alamin adenosyltransferase | - |
| C5F73_RS05105 () | 1058150..1058416 | + | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| C5F73_RS05110 () | 1058556..1058753 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| C5F73_RS05115 () | 1058819..1060492 | + | 1674 | WP_000281243.1 | phosphoethanolamine transferase | - |
| C5F73_RS05120 () | 1060636..1061679 | - | 1044 | WP_000999870.1 | hypothetical protein | - |
| C5F73_RS05125 () | 1062113..1063303 | - | 1191 | WP_001218741.1 | tyrosine-type recombinase/integrase | - |
| C5F73_RS05135 () | 1063662..1064237 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| C5F73_RS05140 () | 1064274..1065971 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| C5F73_RS05145 () | 1065947..1066285 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|