MGE detailed information
MGE type: Prophage MGE length: 63820 bp
Accession: NZ_CP026878 Location: 2745592..2809411 Organism: Shigella dysenteriae strain 07-3308 Replicon: chromosome
Accession: NZ_CP026878 Location: 2745592..2809411 Organism: Shigella dysenteriae strain 07-3308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P62_RS15080 () | 2740684..2741381 | + | 698 | Protein_2858 | IS1 family transposase | - |
| C1P62_RS15085 () | 2741396..2741594 | + | 199 | Protein_2859 | acid phosphatase AphA | - |
| C1P62_RS15090 () | 2741705..2742121 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C1P62_RS15095 () | 2742125..2742481 | + | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| C1P62_RS15100 () | 2742516..2745338 | - | 2823 | WP_000357751.1 | excinuclease ABC subunit UvrA | - |
| C1P62_RS15105 () | 2745592..2746128 | + | 537 | WP_000168299.1 | single-stranded DNA-binding protein SSB1 | - |
| C1P62_RS15110 () | 2746227..2746508 | - | 282 | WP_005021204.1 | YjcB family protein | - |
| C1P62_RS15115 () | 2746870..2747563 | - | 694 | Protein_2865 | IS1 family transposase | - |
| C1P62_RS15120 () | 2747617..2747829 | + | 213 | Protein_2866 | EAL domain-containing protein | - |
| C1P62_RS15125 () | 2747832..2748155 | - | 324 | WP_000019351.1 | Regulatory protein SoxS | VF |
| C1P62_RS15130 () | 2748241..2748705 | + | 465 | WP_000412428.1 | IS607 family transposase ISLhe9 | Transposase |
| C1P62_RS15135 () | 2749252..2750600 | + | 1349 | Protein_2869 | guanine/hypoxanthine transporter GhxP | - |
| C1P62_RS15140 () | 2750751..2752400 | + | 1650 | WP_000402207.1 | Na+/H+ antiporter | - |
| C1P62_RS15145 () | 2752633..2753330 | + | 698 | Protein_2871 | IS1 family transposase | - |
| C1P62_RS15150 () | 2753413..2754231 | + | 819 | WP_000779403.1 | Lipoprotein 28 | VF |
| C1P62_RS15155 () | 2754235..2755158 | - | 924 | WP_000535937.1 | carboxylate/amino acid/amine transporter | - |
| C1P62_RS15165 () | 2755269..2756449 | - | 1181 | Protein_2874 | sugar efflux transporter | - |
| C1P62_RS15170 () | 2756570..2757263 | - | 694 | Protein_2875 | IS1 family transposase | - |
| C1P62_RS15180 () | 2757362..2758530 | + | 1169 | WP_134801566.1 | IS3 family transposase ISLad1 | Transposase |
| C1P62_RS15185 () | 2758539..2758913 | - | 375 | Protein_2877 | DUF4942 domain-containing protein | - |
| C1P62_RS15190 () | 2758981..2760200 | + | 1220 | Protein_2878 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS15195 () | 2760151..2760309 | + | 159 | WP_119164646.1 | integrase | - |
| C1P62_RS15200 () | 2760649..2761343 | + | 695 | WP_087786203.1 | IS1-like element IS1N family transposase | - |
| C1P62_RS15205 () | 2761494..2762537 | + | 1044 | WP_000999849.1 | hypothetical protein | - |
| C1P62_RS15210 () | 2762649..2763342 | - | 694 | Protein_2882 | IS1 family transposase | - |
| C1P62_RS15215 () | 2763402..2764049 | + | 648 | Protein_2883 | DNA helicase | - |
| C1P62_RS15220 () | 2764094..2764984 | - | 891 | Protein_2884 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS15225 () | 2765002..2765699 | - | 698 | Protein_2885 | IS1 family transposase | - |
| C1P62_RS15235 () | 2765840..2766241 | - | 402 | Protein_2886 | IS66 family transposase ISSfl3 | Transposase |
| C1P62_RS15240 () | 2766261..2766596 | - | 336 | WP_134806298.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P62_RS15245 () | 2766593..2767267 | - | 675 | WP_005021247.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P62_RS15250 () | 2767302..2767646 | + | 345 | WP_158249626.1 | transposase | - |
| C1P62_RS15255 () | 2767643..2767990 | + | 348 | WP_000612546.1 | IS66 family transposase ISEc8 | Transposase |
| C1P62_RS15260 () | 2768040..2769578 | + | 1539 | WP_000998102.1 | IS66 family transposase ISEc8 | Transposase |
| C1P62_RS15265 () | 2769738..2773331 | - | 3594 | WP_134806299.1 | acid-sensing system histidine kinase EvgS | - |
| C1P62_RS15270 () | 2773336..2773950 | - | 615 | WP_000991370.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| C1P62_RS15275 () | 2774324..2775021 | + | 698 | Protein_2894 | IS1 family transposase | - |
| C1P62_RS15280 () | 2775041..2775106 | - | 66 | Protein_2895 | omptin family outer membrane protease | - |
| C1P62_RS15290 () | 2776676..2776780 | + | 105 | Protein_2897 | IS3 family transposase | - |
| C1P62_RS15300 () | 2777285..2777982 | - | 698 | Protein_2898 | IS1 family transposase | - |
| C1P62_RS25715 () | 2778781..2778945 | + | 165 | WP_171764071.1 | hypothetical protein | - |
| C1P62_RS15320 () | 2779264..2779407 | - | 144 | WP_001057987.1 | IS3 family transposase IS629 | Transposase |
| C1P62_RS15325 () | 2779453..2779581 | - | 129 | Protein_2902 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P62_RS15330 () | 2779617..2780279 | - | 663 | Protein_2903 | IS256 family transposase ISEc39 | Transposase |
| C1P62_RS15335 () | 2780303..2780996 | - | 694 | Protein_2904 | IS1-like element IS1N family transposase | - |
| C1P62_RS15340 () | 2781470..2781932 | - | 463 | Protein_2905 | IS200-IS605 family transposase IS200C | Transposase |
| C1P62_RS15350 () | 2782338..2782547 | - | 210 | WP_078164603.1 | tellurite resistance TerB family protein | - |
| C1P62_RS15360 () | 2782914..2783699 | - | 786 | Protein_2907 | IS3 family transposase ISLad1 | Transposase |
| C1P62_RS15365 () | 2783766..2784922 | + | 1157 | Protein_2908 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS15370 () | 2784962..2785138 | - | 177 | Protein_2909 | lysine--tRNA ligase | - |
| C1P62_RS15375 () | 2785375..2786832 | - | 1458 | WP_000856800.1 | dipeptide/tripeptide permease DtpC | - |
| C1P62_RS15380 () | 2786891..2789033 | - | 2143 | Protein_2911 | lysine decarboxylase CadA | - |
| C1P62_RS15385 () | 2789113..2790198 | - | 1086 | Protein_2912 | cadaverine/lysine antiporter | - |
| C1P62_RS15390 () | 2790257..2790951 | + | 695 | WP_134801565.1 | IS1 family transposase IS1N | Transposase |
| C1P62_RS15395 () | 2790965..2791465 | - | 501 | Protein_2914 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| C1P62_RS15400 () | 2791775..2792305 | + | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| C1P62_RS15405 () | 2792382..2792732 | - | 351 | WP_000239577.1 | endoribonuclease toxin ChpB | Toxin Detail |
| C1P62_RS15410 () | 2792726..2792977 | - | 252 | WP_001223211.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| C1P62_RS15415 () | 2793189..2793530 | - | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| C1P62_RS15420 () | 2793533..2797312 | - | 3780 | WP_000060952.1 | autotransporter assembly complex protein TamB | - |
| C1P62_RS15425 () | 2797309..2799042 | - | 1734 | WP_001269318.1 | autotransporter assembly complex protein TamA | - |
| C1P62_RS15430 () | 2799248..2799886 | + | 639 | WP_005021358.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| C1P62_RS15435 () | 2800209..2801552 | + | 1344 | WP_000935042.1 | hypothetical protein | VF |
| C1P62_RS15440 () | 2801630..2801836 | - | 207 | WP_000689228.1 | DUF1107 domain-containing protein | - |
| C1P62_RS15445 () | 2802161..2802715 | + | 555 | WP_000175272.1 | YtfJ family protein | - |
| C1P62_RS15450 () | 2802778..2803134 | - | 357 | Protein_2925 | hypothetical protein | - |
| C1P62_RS15455 () | 2803151..2803844 | - | 694 | Protein_2926 | IS1 family transposase | - |
| C1P62_RS15465 () | 2803901..2804218 | + | 318 | Protein_2927 | hypothetical protein | - |
| C1P62_RS15470 () | 2804268..2804621 | - | 354 | WP_000558209.1 | DUF4156 domain-containing protein | - |
| C1P62_RS15475 () | 2804759..2806405 | - | 1647 | WP_000729117.1 | 60 kDa chaperonin | VF |
| C1P62_RS15480 () | 2806449..2806742 | - | 294 | WP_001026276.1 | co-chaperone GroES | - |
| C1P62_RS15485 () | 2807018..2808265 | + | 1248 | WP_000015854.1 | L-methionine/branched-chain amino acid transporter | - |
| C1P62_RS15490 () | 2808301..2808995 | + | 695 | WP_134801571.1 | IS1 family transposase IS1N | Transposase |
| C1P62_RS15495 () | 2809064..2809539 | - | 476 | Protein_2933 | membrane protein FxsA | - |
| C1P62_RS15500 () | 2809875..2811311 | + | 1437 | WP_000069437.1 | aspartate ammonia-lyase | - |
| C1P62_RS15505 () | 2811429..2812729 | + | 1301 | Protein_2935 | anaerobic C4-dicarboxylate transporter DcuA | - |
| C1P62_RS15510 () | 2812845..2813183 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|