MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 192335 bp
Accession: NZ_CP026853        Location: 3262859..3455193         Organism: Escherichia coli strain MS7163       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MS7163_RS17170 () 3258568..3260703 - 2136 WP_000839776.1 ornithine decarboxylase -
MS7163_RS28615 () 3260866..3260949 - 84 WP_212734243.1 hypothetical protein -
MS7163_RS17180 () 3261102..3261809 + 708 WP_000234491.1 DUF554 domain-containing protein -
MS7163_RS17190 () 3262188..3263450 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
MS7163_RS17200 () 3263902..3267417 + 3516 WP_000344091.1 ATP-binding protein -
MS7163_RS17205 () 3267526..3268416 - 891 Protein_3165 phosphoethanolamine transferase -
MS7163_RS17210 () 3268611..3270152 + 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
MS7163_RS17215 () 3270167..3270913 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
MS7163_RS17220 () 3270985..3271611 - 627 Protein_3168 DUF1705 domain-containing protein -
MS7163_RS17225 () 3271786..3272532 - 747 WP_001350744.1 porin family protein -
MS7163_RS17235 () 3272892..3273902 - 1011 WP_000758687.1 Fimbrial adhesin PapG VF
MS7163_RS17240 () 3273946..3274446 - 501 WP_000620429.1 Minor fimbrial protein PrsF VF
MS7163_RS17245 () 3274521..3275042 - 522 WP_000723802.1 Fimbrial protein PapE VF
MS7163_RS17250 () 3275069..3275605 - 537 WP_000597711.1 Fimbrial adapter PapK VF
MS7163_RS17255 () 3275615..3276196 - 582 WP_000261303.1 hypothetical protein VF
MS7163_RS17260 () 3276233..3276967 - 735 WP_042023097.1 Chaperone protein PapD VF
MS7163_RS17265 () 3277038..3279548 - 2511 WP_000654934.1 Outer membrane usher protein PapC VF
MS7163_RS17270 () 3279607..3280194 - 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
MS7163_RS17275 () 3280257..3280805 - 549 WP_000597759.1 Pap fimbrial major pilin protein VF
MS7163_RS17280 () 3281012..3281326 - 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
MS7163_RS17295 () 3281758..3281991 + 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
MS7163_RS17300 () 3282334..3282570 - 237 WP_000958091.1 AlpA family transcriptional regulator -
MS7163_RS17305 () 3282639..3283214 - 576 WP_000991571.1 hypothetical protein -
MS7163_RS17310 () 3283472..3284038 - 567 WP_001126806.1 inovirus-type Gp2 protein -
MS7163_RS17315 () 3284385..3285592 + 1208 Protein_3184 IS3 family transposase ISEc48 Transposase
MS7163_RS17320 () 3285627..3285992 - 366 WP_000639467.1 hypothetical protein -
MS7163_RS17325 () 3286035..3287399 - 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
MS7163_RS17330 () 3287798..3289015 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
MS7163_RS17335 () 3289012..3291021 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
MS7163_RS17340 () 3291011..3292258 + 1248 WP_001350739.1 two-component system response regulator PgtA -
MS7163_RS17345 () 3292505..3292618 + 114 Protein_3190 hypothetical protein -
MS7163_RS28450 () 3292650..3292742 + 93 Protein_3191 ATP-dependent helicase -
MS7163_RS17350 () 3292851..3293174 - 324 WP_015953064.1 hypothetical protein -
MS7163_RS17355 () 3293239..3293883 - 645 WP_001332013.1 hypothetical protein -
MS7163_RS17360 () 3293904..3294173 - 270 WP_000226516.1 PerC family transcriptional regulator -
MS7163_RS17365 () 3294252..3294897 - 646 Protein_3195 ParB N-terminal domain-containing protein -
MS7163_RS17370 () 3294882..3296114 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
MS7163_RS17375 () 3296250..3296894 - 645 WP_001013662.1 hypothetical protein -
MS7163_RS17380 () 3297088..3298536 - 1449 WP_001514359.1 AAA family ATPase -
MS7163_RS17390 () 3299922..3301134 + 1213 Protein_3200 IS256 family transposase -
MS7163_RS17395 () 3301314..3303362 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
MS7163_RS17405 () 3304144..3304884 - 741 WP_001075450.1 inovirus Gp2 family protein -
MS7163_RS28250 () 3304989..3305237 + 249 WP_000573217.1 hypothetical protein -
MS7163_RS17415 () 3306576..3307364 + 789 WP_000816188.1 hypothetical protein -
MS7163_RS17420 () 3307361..3308311 - 951 WP_000157734.1 hypothetical protein -
MS7163_RS17425 () 3308417..3309301 + 885 WP_000010416.1 50S ribosome-binding GTPase -
MS7163_RS17430 () 3309504..3310184 + 681 WP_001282927.1 WYL domain-containing protein -
MS7163_RS17435 () 3310332..3311009 + 678 WP_001097310.1 hypothetical protein -
MS7163_RS17440 () 3311015..3311248 + 234 WP_001278287.1 DUF905 family protein -
MS7163_RS17445 () 3311338..3312156 + 819 WP_001175142.1 DUF945 domain-containing protein -
MS7163_RS17450 () 3312247..3312732 + 486 WP_000860054.1 antirestriction protein -
MS7163_RS17460 () 3312747..3313223 + 477 WP_001186756.1 RadC family protein -
MS7163_RS17465 () 3313292..3313513 + 222 WP_000692312.1 DUF987 domain-containing protein -
MS7163_RS17470 () 3313592..3313969 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
MS7163_RS17475 () 3314016..3314393 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
MS7163_RS17480 () 3314390..3314878 + 489 WP_000761714.1 hypothetical protein -
MS7163_RS17485 () 3314890..3315087 + 198 WP_000839254.1 DUF957 domain-containing protein -
MS7163_RS17490 () 3315172..3316017 + 846 WP_001280513.1 DUF4942 domain-containing protein -
MS7163_RS17495 () 3316088..3317623 + 1536 WP_000492897.1 Cyclic di-GMP phosphodiesterase PdeL VF
MS7163_RS17500 () 3318020..3318190 + 171 Protein_3220 IS110 family transposase ISEc32 Transposase
MS7163_RS17505 () 3319000..3319983 + 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
MS7163_RS17510 () 3320055..3321203 + 1149 WP_000905916.1 hypothetical protein VF
MS7163_RS17515 () 3321227..3322903 + 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
MS7163_RS17520 () 3322913..3323653 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
MS7163_RS17525 () 3323650..3325677 + 2028 WP_000579525.1 hypothetical protein VF
MS7163_RS17530 () 3325712..3326917 + 1206 WP_001161829.1 hypothetical protein VF
MS7163_RS17535 () 3327067..3328296 - 1230 WP_000575410.1 hypothetical protein VF
MS7163_RS17540 () 3328286..3329434 - 1149 WP_000197083.1 hypothetical protein VF
MS7163_RS17545 () 3329427..3330602 - 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
MS7163_RS17550 () 3330599..3331855 - 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
MS7163_RS17555 () 3331855..3332895 - 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
MS7163_RS17560 () 3332892..3333515 - 624 WP_000038461.1 Putative acetyltransferase EpsM VF
MS7163_RS17565 () 3333565..3334224 - 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
MS7163_RS17570 () 3334221..3334997 - 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
MS7163_RS17575 () 3336055..3336591 - 537 WP_000942829.1 Type II secretion system protein M VF
MS7163_RS17580 () 3336593..3337771 - 1179 WP_000097208.1 Type II secretion system protein L VF
MS7163_RS17585 () 3337768..3338745 - 978 WP_000633202.1 Putative type II secretion system protein K VF
MS7163_RS17590 () 3338742..3339347 - 606 WP_001331694.1 Type II secretion system protein J VF
MS7163_RS17595 () 3339344..3339715 - 372 WP_000820096.1 Type II secretion system protein I VF
MS7163_RS17600 () 3339712..3340275 - 564 WP_001115118.1 Type II secretion system protein H VF
MS7163_RS17605 () 3340279..3340734 - 456 WP_001087289.1 Type II secretion system protein G VF
MS7163_RS17610 () 3340751..3341974 - 1224 WP_001173408.1 Type II secretion system protein F VF
MS7163_RS17615 () 3341974..3343467 - 1494 WP_000249340.1 Type II secretion system protein E VF
MS7163_RS17620 () 3343467..3345527 - 2061 WP_001350731.1 Type II secretion system protein D VF
MS7163_RS17625 () 3345557..3346516 - 960 WP_001350730.1 Type II secretion system protein C VF
MS7163_RS17630 () 3346534..3346944 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
MS7163_RS17635 () 3347010..3347819 - 810 WP_000895874.1 Leader peptidase PppA VF
MS7163_RS17645 () 3347983..3352545 - 4563 WP_001034562.1 hypothetical protein VF
MS7163_RS17655 () 3353029..3354711 - 1683 WP_000259302.1 glycolate permease GlcA -
MS7163_RS17660 () 3355067..3357238 - 2172 WP_000084099.1 malate synthase G -
MS7163_RS17665 () 3357260..3357664 - 405 WP_000853256.1 protein GlcG -
MS7163_RS17670 () 3357669..3358892 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
MS7163_RS17675 () 3358903..3359955 - 1053 WP_000943075.1 glycolate oxidase subunit GlcE -
MS7163_RS17680 () 3359955..3361454 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
MS7163_RS17685 () 3361705..3362469 + 765 WP_001314155.1 transcriptional regulator GlcC -
MS7163_RS17690 () 3362476..3363618 - 1143 WP_001331688.1 DNA-binding protein -
MS7163_RS17700 () 3363989..3365713 + 1725 WP_011703666.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
MS7163_RS17705 () 3365710..3366624 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
MS7163_RS17710 () 3366656..3366904 + 249 WP_000248098.1 acyl carrier protein -
MS7163_RS17715 () 3366904..3368076 + 1173 WP_000524959.1 8-amino-7-oxononanoate synthase VF
MS7163_RS17720 () 3368111..3369190 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
MS7163_RS17725 () 3369187..3370257 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
MS7163_RS17730 () 3370288..3370848 - 561 WP_001141149.1 YtfJ family protein -
MS7163_RS17735 () 3370848..3371684 - 837 WP_000984967.1 hypothetical protein -
MS7163_RS17740 () 3371684..3373033 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
MS7163_RS17745 () 3373079..3373837 - 759 WP_001445422.1 hypothetical protein -
MS7163_RS17750 () 3373869..3374582 - 714 WP_001076282.1 thymidylate kinase -
MS7163_RS17755 () 3374757..3375449 + 693 WP_001190683.1 thymidylate kinase -
MS7163_RS17760 () 3375498..3376997 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
MS7163_RS17765 () 3377289..3379148 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
MS7163_RS17770 () 3379353..3380219 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
MS7163_RS17775 () 3380352..3380600 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
MS7163_RS17780 () 3380613..3380954 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
MS7163_RS17785 () 3380947..3381435 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
MS7163_RS17790 () 3381428..3381922 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
MS7163_RS17795 () 3381922..3383625 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
MS7163_RS17800 () 3383622..3384800 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
MS7163_RS17805 () 3384790..3385776 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
MS7163_RS17810 () 3385779..3386897 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
MS7163_RS17820 () 3387086..3387373 - 288 WP_001059136.1 DUF2623 domain-containing protein -
MS7163_RS17825 () 3387492..3388379 - 888 WP_001350729.1 dienelactone hydrolase family protein -
MS7163_RS17830 () 3388536..3389576 + 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
MS7163_RS17835 () 3389616..3390110 - 495 WP_000439331.1 TIGR00645 family protein -
MS7163_RS17840 () 3390301..3391185 + 885 WP_000018758.1 putative oxidoreductase YghA VF
MS7163_RS17845 () 3391224..3391649 - 426 WP_001240712.1 TonB system transport protein ExbD -
MS7163_RS17850 () 3391656..3392390 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
MS7163_RS17860 () 3392642..3393829 + 1188 WP_000763935.1 cystathionine beta-lyase -
MS7163_RS17865 () 3393969..3394628 + 660 WP_000268419.1 DedA family protein -
MS7163_RS17870 () 3394668..3395567 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
MS7163_RS17875 () 3395761..3396924 + 1164 WP_001058819.1 alcohol dehydrogenase -
MS7163_RS17880 () 3397029..3397856 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
MS7163_RS17885 () 3398056..3398982 + 927 WP_000691616.1 YbjP/YqhG family protein -
MS7163_RS17890 () 3399033..3399290 + 258 WP_000848521.1 lipoprotein YqhH -
MS7163_RS17895 () 3399332..3401551 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
MS7163_RS17900 () 3401803..3402552 + 750 WP_000438655.1 FadR family transcriptional regulator -
MS7163_RS17905 () 3402875..3404347 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
MS7163_RS17910 () 3404344..3405360 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
MS7163_RS17915 () 3405371..3406381 + 1011 WP_000214536.1 putative oxidoreductase YjmC VF
MS7163_RS17920 () 3406454..3407437 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
MS7163_RS17925 () 3407479..3407961 + 483 WP_001259754.1 TRAP transporter small permease -
MS7163_RS17930 () 3407972..3409276 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
MS7163_RS17935 () 3409347..3410759 - 1413 WP_000059395.1 cell division protein FtsP -
MS7163_RS17940 () 3410834..3411571 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
MS7163_RS17945 () 3411806..3414064 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
MS7163_RS17950 () 3414202..3415809 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
MS7163_RS17955 () 3415918..3416400 - 483 WP_000183493.1 GyrI-like domain-containing protein -
MS7163_RS17960 () 3416453..3416845 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
MS7163_RS17965 () 3416997..3417656 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
MS7163_RS17970 () 3417653..3419002 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
MS7163_RS17975 () 3419048..3419380 - 333 WP_000914696.1 DUF2645 family protein -
MS7163_RS17980 () 3419387..3420579 - 1193 Protein_3311 Hcp family type VI secretion system effector -
MS7163_RS17985 () 3420829..3421410 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
MS7163_RS17990 () 3421441..3421755 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
MS7163_RS17995 () 3421800..3422687 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
MS7163_RS18000 () 3422684..3423631 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
MS7163_RS18005 () 3423642..3424679 - 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
MS7163_RS18010 () 3424688..3425671 - 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
MS7163_RS18015 () 3425668..3426477 - 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
MS7163_RS18020 () 3426851..3428992 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
MS7163_RS18025 () 3429056..3430948 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
MS7163_RS18030 () 3430977..3431558 - 582 WP_000105733.1 esterase YqiA -
MS7163_RS18035 () 3431558..3432385 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
MS7163_RS18040 () 3432410..3432832 - 423 WP_000833393.1 DUF1249 family protein -
MS7163_RS18045 () 3432833..3433462 - 630 WP_000917117.1 ADP-ribose diphosphatase -
MS7163_RS18050 () 3433667..3435148 + 1482 WP_000735289.1 outer membrane channel protein TolC -
MS7163_RS18060 () 3435296..3435967 + 672 WP_000831543.1 DUF1190 family protein -
MS7163_RS18065 () 3435973..3437133 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
MS7163_RS18070 () 3437618..3439414 + 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
MS7163_RS18075 () 3439432..3440100 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
MS7163_RS18080 () 3440115..3440786 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
MS7163_RS18085 () 3440832..3441620 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
MS7163_RS18090 () 3441763..3442536 + 774 WP_001295627.1 zinc transporter ZupT -
MS7163_RS18095 () 3442598..3442768 - 171 WP_001296421.1 hypothetical protein -
MS7163_RS18100 () 3443339..3443902 + 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
MS7163_RS18105 () 3443989..3446511 + 2523 WP_001060674.1 Outer membrane usher protein PapC VF
MS7163_RS18110 () 3446527..3447267 + 741 WP_001351038.1 putative fimbrial chaperone YfcS VF
MS7163_RS18115 () 3447264..3448313 + 1050 WP_000631271.1 pilus protein -
MS7163_RS18120 () 3448367..3449020 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
MS7163_RS18125 () 3449394..3449693 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
MS7163_RS18130 () 3449728..3449928 - 201 WP_001296424.1 cell surface composition regulator GlgS -
MS7163_RS18140 () 3450198..3450827 + 630 WP_000599932.1 DUF1449 family protein -
MS7163_RS18145 () 3450854..3452515 + 1662 WP_001298380.1 flotillin family protein -
- () 3452713..3452854 - 142 NuclAT_0 - -
- () 3452713..3452854 - 142 NuclAT_0 - -
- () 3452713..3452854 - 142 NuclAT_0 - -
- () 3452713..3452854 - 142 NuclAT_0 - -
MS7163_RS18155 () 3452755..3452814 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
MS7163_RS18160 () 3452934..3454367 - 1434 WP_000869177.1 Bifunctional protein HldE VF
MS7163_RS18165 () 3454415..3457255 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
MS7163_RS18170 () 3457278..3458579 - 1302 WP_000046243.1 inorganic triphosphatase -
MS7163_RS18180 () 3458821..3459441 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance