MGE detailed information
MGE type: Genomic_island MGE length: 11672 bp
Accession: NZ_CP026846 Location: 4402594..4414265 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Accession: NZ_CP026846 Location: 4402594..4414265 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P57_RS22160 (4398919) | 4398919..4400127 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| C1P57_RS22165 (4400153) | 4400153..4401484 | - | 1332 | WP_078166125.1 | threonine/serine transporter TdcC | - |
| C1P57_RS22170 (4401506) | 4401506..4402495 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C1P57_RS22175 (4402594) | 4402594..4403532 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| C1P57_RS25490 (4403847) | 4403847..4404065 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| C1P57_RS22185 (4404321) | 4404321..4404860 | + | 540 | WP_000675746.1 | protein YhaB | - |
| C1P57_RS25495 (4404882) | 4404882..4406068 | + | 1187 | Protein_4288 | YhaC family protein | - |
| C1P57_RS22205 (4407090) | 4407090..4408235 | - | 1146 | WP_004971349.1 | glycerate 2-kinase | - |
| C1P57_RS22210 (4408332) | 4408332..4409222 | - | 891 | WP_078166133.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C1P57_RS22215 (4409252) | 4409252..4410022 | - | 771 | WP_001058219.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C1P57_RS22220 (4410038) | 4410038..4411371 | - | 1334 | Protein_4292 | galactarate/glucarate/glycerate transporter GarP | - |
| C1P57_RS22225 (4411746) | 4411746..4413317 | + | 1572 | WP_134795901.1 | galactarate dehydratase | - |
| C1P57_RS22230 (4413466) | 4413466..4413801 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C1P57_RS22235 (4413801) | 4413801..4414265 | + | 465 | WP_000347255.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C1P57_RS22240 (4414320) | 4414320..4415129 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| C1P57_RS22245 (4415378) | 4415378..4416658 | + | 1281 | WP_000681932.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C1P57_RS22250 (4416681) | 4416681..4417154 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C1P57_RS22255 (4417165) | 4417165..4417944 | + | 780 | WP_078166122.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C1P57_RS22260 (4417934) | 4417934..4418812 | + | 879 | WP_061354028.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| C1P57_RS22265 (4418830) | 4418830..4419264 | + | 435 | WP_000948814.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|