MGE detailed information
MGE type: Genomic_island MGE length: 24217 bp
Accession: NZ_CP026846 Location: 1286218..1310434 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Accession: NZ_CP026846 Location: 1286218..1310434 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P57_RS25070 (1282332) | 1282332..1286191 | + | 3860 | Protein_1220 | RHS element core protein | - |
| C1P57_RS06290 (1286218) | 1286218..1286526 | + | 309 | WP_078167332.1 | hypothetical protein | - |
| C1P57_RS06295 (1286549) | 1286549..1287196 | + | 648 | WP_000063761.1 | Phosphocholine transferase AnkX | VF |
| C1P57_RS06300 (1287209) | 1287209..1287541 | + | 333 | WP_004977372.1 | Protein RhsD | VF |
| C1P57_RS06305 (1287643) | 1287643..1288760 | + | 1118 | Protein_1224 | ISAs1 family transposase ISEc1 | Transposase |
| C1P57_RS06310 (1288771) | 1288771..1288968 | + | 198 | Protein_1225 | ISAs1 family transposase | - |
| C1P57_RS06315 (1289338) | 1289338..1290474 | + | 1137 | WP_134795606.1 | ISAs1 family transposase ISEc1 | Transposase |
| C1P57_RS06320 (1290484) | 1290484..1290705 | + | 222 | Protein_1227 | hypothetical protein | - |
| C1P57_RS25555 (1290689) | 1290689..1291171 | + | 483 | WP_000939263.1 | protein YdcD | - |
| C1P57_RS06330 (1291086) | 1291086..1291271 | - | 186 | WP_128622657.1 | hypothetical protein | - |
| C1P57_RS06335 (1291352) | 1291352..1292523 | + | 1172 | Protein_1230 | ISAs1 family transposase ISEc26 | Transposase |
| C1P57_RS06340 (1292767) | 1292767..1293903 | + | 1137 | WP_134795607.1 | ISAs1 family transposase ISEc1 | Transposase |
| C1P57_RS06345 (1293941) | 1293941..1294711 | - | 771 | WP_001118012.1 | 2-oxoglutaramate amidase | - |
| C1P57_RS06350 (1294892) | 1294892..1295338 | + | 447 | WP_284522444.1 | Ivy family C-type lysozyme inhibitor | - |
| C1P57_RS06355 (1295381) | 1295381..1296136 | - | 756 | Protein_1234 | DUF1974 domain-containing protein | - |
| C1P57_RS06360 (1296257) | 1296257..1296835 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| C1P57_RS06365 (1297041) | 1297041..1297808 | + | 768 | WP_078167336.1 | class II glutamine amidotransferase | - |
| C1P57_RS06370 (1297779) | 1297779..1298519 | - | 741 | WP_001225684.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| C1P57_RS06375 (1298675) | 1298675..1298953 | - | 279 | WP_000615975.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C1P57_RS06380 (1298956) | 1298956..1299216 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C1P57_RS06385 (1299300) | 1299300..1300456 | + | 1157 | WP_086020980.1 | IS3 family transposase ISSd1 | Transposase |
| C1P57_RS06390 (1300481) | 1300481..1302286 | - | 1806 | WP_134795608.1 | hypothetical protein | - |
| C1P57_RS06395 (1302321) | 1302321..1302518 | - | 198 | WP_001387927.1 | hypothetical protein | - |
| C1P57_RS06400 (1302671) | 1302671..1303702 | - | 1032 | WP_000999103.1 | hypothetical protein | - |
| C1P57_RS06405 (1303717) | 1303717..1304100 | - | 384 | WP_000013184.1 | hypothetical protein | - |
| C1P57_RS06410 (1304105) | 1304105..1304302 | - | 198 | WP_000807036.1 | hypothetical protein | - |
| C1P57_RS25080 (1305297) | 1305297..1305604 | - | 308 | Protein_1246 | transporter | - |
| C1P57_RS06425 (1305604) | 1305604..1305807 | - | 204 | WP_000580785.1 | hypothetical protein | - |
| C1P57_RS06430 (1305865) | 1305865..1306248 | - | 384 | WP_078167324.1 | hypothetical protein | - |
| C1P57_RS06435 (1306345) | 1306345..1306614 | - | 270 | WP_027663129.1 | hypothetical protein | - |
| C1P57_RS06440 (1306624) | 1306624..1307250 | - | 627 | WP_078167325.1 | transcriptional regulator | - |
| C1P57_RS06445 (1307286) | 1307286..1307468 | - | 183 | WP_078167326.1 | hypothetical protein | - |
| C1P57_RS06450 (1307490) | 1307490..1307672 | - | 183 | WP_000873435.1 | hypothetical protein | - |
| C1P57_RS06455 (1309180) | 1309180..1309731 | + | 552 | WP_001273869.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| C1P57_RS24685 (1310282) | 1310282..1310434 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| C1P57_RS06470 (1311231) | 1311231..1312484 | - | 1254 | WP_000893316.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C1P57_RS06475 (1312496) | 1312496..1313599 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C1P57_RS06480 (1313887) | 1313887..1314942 | + | 1056 | WP_078167327.1 | phosphoporin PhoE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|