MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 14780 bp
Accession: NZ_CP026831 Location: 3014965..3029744 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Accession: NZ_CP026831 Location: 3014965..3029744 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P71_RS16950 (3011341) | 3011341..3011592 | - | 252 | Protein_3039 | DUF1367 family protein | - |
| C1P71_RS26525 (3011653) | 3011653..3011820 | - | 168 | WP_171766295.1 | hypothetical protein | - |
| C1P71_RS16955 (3012043) | 3012043..3012198 | - | 156 | WP_284514390.1 | type I toxin-antitoxin system Hok family toxin | - |
| C1P71_RS16960 (3012614) | 3012614..3012970 | + | 357 | WP_046881158.1 | helix-turn-helix domain-containing protein | - |
| C1P71_RS16965 (3012985) | 3012985..3013542 | + | 558 | WP_128880897.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C1P71_RS26530 (3013704) | 3013704..3013847 | + | 144 | WP_000206095.1 | hypothetical protein | - |
| C1P71_RS16970 (3013897) | 3013897..3014091 | - | 195 | WP_046881536.1 | hypothetical protein | - |
| C1P71_RS16980 (3014539) | 3014539..3015093 | - | 555 | Protein_3046 | IS3-like element IS600 family transposase | - |
| C1P71_RS16985 (3015185) | 3015185..3016413 | + | 1229 | WP_128879903.1 | IS3-like element IS2 family transposase | - |
| C1P71_RS16990 (3016522) | 3016522..3016974 | + | 453 | Protein_3048 | conjugal transfer protein TraD | - |
| C1P71_RS16995 (3016983) | 3016983..3017381 | - | 399 | WP_128879691.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C1P71_RS17000 (3017381) | 3017381..3017608 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P71_RS17005 (3017690) | 3017690..3022930 | + | 5241 | Protein_3051 | conjugative transfer relaxase/helicase TraI | - |
| C1P71_RS17015 (3023094) | 3023094..3024302 | - | 1209 | WP_128879692.1 | IS91 family transposase | - |
| C1P71_RS17020 (3024283) | 3024283..3024555 | - | 273 | WP_128879693.1 | hypothetical protein | - |
| C1P71_RS17025 (3024693) | 3024693..3025439 | + | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| C1P71_RS17030 (3025494) | 3025494..3026054 | + | 561 | WP_128879718.1 | fertility inhibition protein FinO | - |
| C1P71_RS17035 (3026185) | 3026185..3026397 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| C1P71_RS17045 (3026640) | 3026640..3027101 | + | 462 | WP_128879694.1 | thermonuclease family protein | - |
| C1P71_RS17050 (3027147) | 3027147..3027356 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C1P71_RS17055 (3027395) | 3027395..3027778 | + | 384 | Protein_3059 | DUF2726 domain-containing protein | - |
| C1P71_RS17060 (3027949) | 3027949..3029160 | - | 1212 | WP_128879695.1 | IS91 family transposase | - |
| C1P71_RS17065 (3029188) | 3029188..3030084 | - | 897 | Protein_3061 | IS3-like element IS600 family transposase | - |
| C1P71_RS17070 (3030146) | 3030146..3031297 | + | 1152 | WP_001254927.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS17075 (3031304) | 3031304..3031495 | + | 192 | Protein_3063 | IS3 family transposase | - |
| C1P71_RS17080 (3031586) | 3031586..3032814 | + | 1229 | WP_171766296.1 | IS3-like element IS2 family transposase | - |
| C1P71_RS17085 (3032826) | 3032826..3033536 | + | 711 | Protein_3065 | IS3-like element IS600 family transposase | - |
| C1P71_RS17090 (3033581) | 3033581..3033796 | - | 216 | Protein_3066 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|