MGE detailed information
MGE type: Genomic_island MGE length: 21484 bp
Accession: NZ_CP026827 Location: 3138576..3160059 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: chromosome
Accession: NZ_CP026827 Location: 3138576..3160059 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B75_RS17795 (3133774) | 3133774..3134982 | - | 1209 | WP_119170081.1 | propionate kinase | - |
| C5B75_RS17800 (3135008) | 3135008..3136339 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| C5B75_RS17805 (3136361) | 3136361..3137350 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C5B75_RS17810 (3137449) | 3137449..3138387 | - | 939 | WP_000104217.1 | transcriptional regulator TdcA | - |
| C5B75_RS26180 (3138702) | 3138702..3138920 | + | 219 | Protein_3203 | transcriptional activator TdcR | - |
| C5B75_RS17820 (3139176) | 3139176..3139715 | + | 540 | WP_000675743.1 | protein YhaB | - |
| C5B75_RS17825 (3139737) | 3139737..3140914 | + | 1178 | Protein_3205 | YhaC family protein | - |
| C5B75_RS17835 (3141710) | 3141710..3142855 | - | 1146 | WP_128875386.1 | glycerate 2-kinase | - |
| C5B75_RS17840 (3142952) | 3142952..3143842 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C5B75_RS17845 (3143872) | 3143872..3144642 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C5B75_RS17850 (3144658) | 3144658..3145992 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C5B75_RS17855 (3146367) | 3146367..3147938 | + | 1572 | Protein_3210 | galactarate dehydratase | - |
| C5B75_RS17860 (3148087) | 3148087..3148422 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C5B75_RS17865 (3148422) | 3148422..3148886 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C5B75_RS17870 (3148941) | 3148941..3149750 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| C5B75_RS17875 (3149999) | 3149999..3151279 | + | 1281 | WP_000681922.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C5B75_RS17880 (3151302) | 3151302..3151775 | + | 474 | Protein_3215 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C5B75_RS17885 (3151786) | 3151786..3152565 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C5B75_RS17890 (3152555) | 3152555..3153433 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| C5B75_RS17895 (3153451) | 3153451..3153885 | + | 435 | WP_000948814.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| C5B75_RS17900 (3153882) | 3153882..3155015 | + | 1134 | WP_119170085.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| C5B75_RS17905 (3155366) | 3155366..3156520 | + | 1155 | WP_001114873.1 | AgaS family sugar isomerase | - |
| C5B75_RS17910 (3156533) | 3156533..3157393 | + | 861 | WP_119170086.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| C5B75_RS17915 (3157451) | 3157451..3157660 | - | 210 | WP_128875387.1 | hypothetical protein | - |
| C5B75_RS17920 (3157559) | 3157559..3158256 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C5B75_RS17925 (3158700) | 3158700..3159284 | + | 585 | WP_001045442.1 | putative fimbrial-like protein YraH | VF |
| C5B75_RS17930 (3159364) | 3159364..3160059 | + | 696 | WP_000044768.1 | putative fimbrial chaperone YraI | VF |
| C5B75_RS17935 (3160089) | 3160089..3162605 | + | 2517 | WP_119170099.1 | fimbria/pilus outer membrane usher protein | - |
| C5B75_RS17940 (3162616) | 3162616..3163707 | + | 1092 | WP_128875388.1 | fimbrial protein | - |
| C5B75_RS17945 (3163750) | 3163750..3164610 | - | 861 | WP_000809253.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|