MGE detailed information
MGE type: IScluster/Tn MGE length: 34069 bp
Accession: NZ_CP026819 Location: 1896072..1930140 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Accession: NZ_CP026819 Location: 1896072..1930140 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P77_RS11005 () | 1891390..1893033 | + | 1644 | WP_046891740.1 | NEL-type E3 ubiquitin ligase domain-containing protein | - |
| C1P77_RS11015 () | 1893213..1893836 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P77_RS11020 () | 1893787..1895056 | - | 1270 | Protein_2035 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P77_RS11025 () | 1895080..1895625 | - | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C1P77_RS27215 () | 1895628..1895696 | - | 69 | Protein_2037 | phage tail protein | - |
| C1P77_RS11030 () | 1895752..1896449 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C1P77_RS11035 () | 1896465..1897393 | + | 929 | Protein_2039 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11045 () | 1897443..1898192 | - | 750 | Protein_2040 | hypothetical protein | - |
| C1P77_RS11050 () | 1898194..1898472 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P77_RS11060 () | 1898640..1898795 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1898807..1898865 | + | 59 | - | - | Antitoxin Detail |
| C1P77_RS11075 () | 1899447..1899863 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C1P77_RS11080 () | 1899975..1900355 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P77_RS11085 () | 1900352..1900699 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P77_RS11090 () | 1900748..1902286 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P77_RS11095 () | 1902336..1902791 | - | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P77_RS11100 () | 1902778..1903083 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P77_RS11105 () | 1903080..1903502 | - | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P77_RS11110 () | 1903543..1904613 | - | 1071 | WP_024259707.1 | hypothetical protein | - |
| C1P77_RS11115 () | 1904685..1905110 | - | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C1P77_RS11120 () | 1905107..1905376 | - | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C1P77_RS11125 () | 1905392..1905628 | + | 237 | Protein_2053 | IS3 family transposase ISSd1 | Transposase |
| C1P77_RS11130 () | 1905684..1906381 | + | 698 | WP_284513892.1 | IS1 family transposase IS1R | Transposase |
| C1P77_RS11135 () | 1906397..1907325 | + | 929 | Protein_2055 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11140 () | 1907366..1907958 | + | 593 | Protein_2056 | hypothetical protein ; Integrase | Integrase |
| C1P77_RS11150 () | 1908169..1908966 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P77_RS11160 () | 1909456..1911139 | + | 1684 | Protein_2058 | Invasin | VF |
| C1P77_RS11170 () | 1912450..1917030 | + | 4581 | Protein_2060 | Ig-like domain-containing protein | - |
| C1P77_RS11175 () | 1917095..1918251 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11180 () | 1918294..1920018 | + | 1725 | Protein_2062 | Ig-like domain-containing protein | - |
| C1P77_RS11185 () | 1920280..1920450 | - | 171 | Protein_2063 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P77_RS11195 () | 1921216..1922109 | - | 894 | Protein_2065 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P77_RS11205 () | 1923201..1924517 | + | 1317 | Protein_2067 | shikimate transporter | - |
| C1P77_RS11210 () | 1924619..1926073 | + | 1455 | WP_001060236.1 | AMP nucleosidase | - |
| C1P77_RS11215 () | 1926416..1926772 | + | 357 | Protein_2069 | putative transcriptional regulatory protein YeeN | VF |
| C1P77_RS11220 () | 1926829..1927526 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS11225 () | 1927541..1927909 | + | 369 | Protein_2071 | putative transcriptional regulatory protein YeeN | VF |
| C1P77_RS11235 () | 1928536..1929387 | - | 852 | Protein_2072 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P77_RS11240 () | 1929443..1930140 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS11245 () | 1930156..1930797 | - | 642 | Protein_2074 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P77_RS11255 () | 1931071..1932021 | - | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P77_RS11260 () | 1932123..1933040 | - | 918 | WP_001011482.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P77_RS11270 () | 1933499..1934434 | - | 936 | WP_000986350.1 | L,D-transpeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|