MGE detailed information
MGE type: Prophage MGE length: 73310 bp
Accession: NZ_CP026819 Location: 1881302..1954611 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Accession: NZ_CP026819 Location: 1881302..1954611 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P77_RS10920 () | 1877211..1877882 | - | 672 | WP_001339045.1 | response regulator transcription factor HprR | - |
| C1P77_RS10925 () | 1878015..1878428 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P77_RS10930 () | 1878537..1879541 | + | 1005 | WP_000740102.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P77_RS10935 () | 1879542..1880177 | + | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P77_RS10940 () | 1880434..1881084 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P77_RS10945 () | 1881302..1882458 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P77_RS10950 () | 1882694..1882789 | + | 96 | Protein_2023 | cytochrome B | - |
| C1P77_RS10960 () | 1884153..1884560 | + | 408 | Protein_2025 | cytochrome b | - |
| C1P77_RS10965 () | 1885462..1886630 | + | 1169 | WP_094096507.1 | IS3 family transposase ISLad1 | Transposase |
| C1P77_RS10975 () | 1886790..1887038 | - | 249 | Protein_2027 | tail fiber assembly protein | - |
| C1P77_RS10980 () | 1887164..1887520 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P77_RS10985 () | 1887517..1887867 | + | 351 | WP_000624671.1 | IS66 family transposase ISEc47 | Transposase |
| C1P77_RS10990 () | 1887898..1889490 | + | 1593 | WP_046891739.1 | IS66 family transposase ISEc43 | Transposase |
| C1P77_RS10995 () | 1889630..1890298 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P77_RS11005 () | 1891390..1893033 | + | 1644 | WP_046891740.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P77_RS11015 () | 1893213..1893836 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P77_RS11020 () | 1893787..1895056 | - | 1270 | Protein_2035 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P77_RS11025 () | 1895080..1895625 | - | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C1P77_RS27215 () | 1895628..1895696 | - | 69 | Protein_2037 | phage tail protein | - |
| C1P77_RS11030 () | 1895752..1896449 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C1P77_RS11035 () | 1896465..1897393 | + | 929 | Protein_2039 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11045 () | 1897443..1898192 | - | 750 | Protein_2040 | hypothetical protein | - |
| C1P77_RS11050 () | 1898194..1898472 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P77_RS11060 () | 1898640..1898795 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1898807..1898865 | + | 59 | - | - | Antitoxin Detail |
| C1P77_RS11075 () | 1899447..1899863 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C1P77_RS11080 () | 1899975..1900355 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P77_RS11085 () | 1900352..1900699 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P77_RS11090 () | 1900748..1902286 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P77_RS11095 () | 1902336..1902791 | - | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P77_RS11100 () | 1902778..1903083 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P77_RS11105 () | 1903080..1903502 | - | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P77_RS11110 () | 1903543..1904613 | - | 1071 | WP_024259707.1 | hypothetical protein | - |
| C1P77_RS11115 () | 1904685..1905110 | - | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C1P77_RS11120 () | 1905107..1905376 | - | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C1P77_RS11125 () | 1905392..1905628 | + | 237 | Protein_2053 | IS3 family transposase ISSd1 | Transposase |
| C1P77_RS11130 () | 1905684..1906381 | + | 698 | WP_284513892.1 | IS1 family transposase IS1R | Transposase |
| C1P77_RS11135 () | 1906397..1907325 | + | 929 | Protein_2055 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11140 () | 1907366..1907958 | + | 593 | Protein_2056 | hypothetical protein ; Integrase | Integrase |
| C1P77_RS11150 () | 1908169..1908966 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P77_RS11160 () | 1909456..1911139 | + | 1684 | Protein_2058 | Invasin | VF |
| C1P77_RS11170 () | 1912450..1917030 | + | 4581 | Protein_2060 | Ig-like domain-containing protein | - |
| C1P77_RS11175 () | 1917095..1918251 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P77_RS11180 () | 1918294..1920018 | + | 1725 | Protein_2062 | Ig-like domain-containing protein | - |
| C1P77_RS11185 () | 1920280..1920450 | - | 171 | Protein_2063 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P77_RS11195 () | 1921216..1922109 | - | 894 | Protein_2065 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P77_RS11205 () | 1923201..1924517 | + | 1317 | Protein_2067 | shikimate transporter | - |
| C1P77_RS11210 () | 1924619..1926073 | + | 1455 | WP_001060236.1 | AMP nucleosidase | - |
| C1P77_RS11215 () | 1926416..1926772 | + | 357 | Protein_2069 | putative transcriptional regulatory protein YeeN | VF |
| C1P77_RS11220 () | 1926829..1927526 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS11225 () | 1927541..1927909 | + | 369 | Protein_2071 | putative transcriptional regulatory protein YeeN | VF |
| C1P77_RS11235 () | 1928536..1929387 | - | 852 | Protein_2072 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P77_RS11240 () | 1929443..1930140 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS11245 () | 1930156..1930797 | - | 642 | Protein_2074 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P77_RS11255 () | 1931071..1932021 | - | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P77_RS11260 () | 1932123..1933040 | - | 918 | WP_001011482.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P77_RS11270 () | 1933499..1934434 | - | 936 | WP_000986350.1 | L,D-transpeptidase | - |
| C1P77_RS11275 () | 1934496..1935575 | - | 1080 | WP_001166156.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P77_RS11280 () | 1935587..1936330 | - | 744 | WP_005042779.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P77_RS11285 () | 1936327..1936872 | - | 546 | WP_000973150.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P77_RS11290 () | 1937024..1937197 | - | 174 | Protein_2081 | cobalamin biosynthesis protein | - |
| C1P77_RS27220 () | 1937176..1937364 | - | 189 | Protein_2082 | IS4 family transposase | - |
| C1P77_RS11305 () | 1939101..1940329 | + | 1229 | WP_167544908.1 | IS3 family transposase IS2 | Transposase |
| C1P77_RS11315 () | 1940411..1941433 | + | 1023 | WP_000255950.1 | IS21 family transposase IS100kyp | Transposase |
| C1P77_RS11320 () | 1941430..1941906 | + | 477 | Protein_2086 | IS21 family transposase IS100 | Transposase |
| C1P77_RS11325 () | 1941961..1943174 | + | 1214 | WP_167544914.1 | IS3 family transposase IS629 | Transposase |
| C1P77_RS11330 () | 1943214..1943525 | + | 312 | Protein_2088 | IS21 family transposase IS100kyp | Transposase |
| C1P77_RS11340 () | 1943715..1943981 | + | 267 | WP_064717141.1 | EutP/PduV family microcompartment system protein | - |
| C1P77_RS11345 () | 1944082..1944411 | - | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P77_RS11350 () | 1944583..1945641 | - | 1059 | WP_001200876.1 | FUSC family protein | - |
| C1P77_RS11355 () | 1945839..1946312 | - | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| C1P77_RS11360 () | 1946430..1947596 | - | 1167 | Protein_2093 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| C1P77_RS27225 () | 1947523..1947681 | + | 159 | WP_001302630.1 | hypothetical protein | - |
| C1P77_RS11365 () | 1947806..1949230 | + | 1425 | WP_032149032.1 | exodeoxyribonuclease I | - |
| C1P77_RS11370 () | 1949273..1949500 | - | 228 | WP_000985273.1 | thiosulfate utilization sulfurtransferase TsuB/YeeD | - |
| C1P77_RS11375 () | 1949514..1950572 | - | 1059 | WP_069661400.1 | thiosulfate utilization transporter TsuA/YeeE | - |
| C1P77_RS11380 () | 1950751..1952109 | - | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| C1P77_RS11385 () | 1952099..1952161 | - | 63 | WP_010723108.1 | membrane protein YoeI | - |
| C1P77_RS11390 () | 1952376..1952528 | - | 153 | Protein_2100 | LysR family transcriptional regulator | - |
| C1P77_RS11400 () | 1953914..1954611 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS11405 () | 1954628..1955419 | - | 792 | Protein_2103 | LysR substrate-binding domain-containing protein | - |
| C1P77_RS11410 () | 1955465..1956289 | - | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
| C1P77_RS11415 () | 1956372..1956626 | - | 255 | WP_000767829.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | - |
| C1P77_RS11420 () | 1956623..1956874 | - | 252 | WP_001259255.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| C1P77_RS11430 () | 1957157..1957207 | + | 51 | WP_001364200.1 | his operon leader peptide | - |
| C1P77_RS11435 () | 1957353..1958252 | + | 900 | WP_000131769.1 | ATP phosphoribosyltransferase | - |
| C1P77_RS11440 () | 1958258..1959562 | + | 1305 | WP_005032012.1 | histidinol dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|