MGE detailed information
MGE type: Prophage MGE length: 81696 bp
Accession: NZ_CP026815 Location: 2525236..2606931 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Accession: NZ_CP026815 Location: 2525236..2606931 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P76_RS13335 () | 2521624..2522981 | + | 1358 | Protein_2597 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
| C1P76_RS13340 () | 2522993..2524186 | + | 1194 | WP_000209505.1 | tryptophan synthase subunit beta | - |
| C1P76_RS13345 () | 2524186..2524992 | + | 807 | WP_000443080.1 | tryptophan synthase subunit alpha | - |
| C1P76_RS13355 () | 2526044..2526169 | - | 126 | Protein_2601 | OmpW family outer membrane protein | - |
| C1P76_RS27795 () | 2526474..2526644 | - | 171 | WP_000251936.1 | hypothetical protein | - |
| C1P76_RS13360 () | 2526759..2527027 | - | 269 | Protein_2603 | tail fiber assembly protein | - |
| C1P76_RS13365 () | 2527084..2527752 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| C1P76_RS13375 () | 2527807..2528379 | - | 573 | WP_001294928.1 | tail fiber assembly protein | - |
| C1P76_RS13380 () | 2528391..2531366 | - | 2976 | WP_032335670.1 | phage tail protein | - |
| C1P76_RS13385 () | 2531431..2532029 | - | 599 | Protein_2607 | Outer membrane protein X | VF |
| C1P76_RS13390 () | 2532097..2535576 | - | 3480 | WP_000515473.1 | host specificity protein J | - |
| C1P76_RS13395 () | 2535684..2535980 | - | 297 | WP_134800674.1 | hypothetical protein | - |
| C1P76_RS13400 () | 2536053..2536595 | - | 543 | WP_000847633.1 | tail assembly protein | - |
| C1P76_RS13405 () | 2536592..2537335 | - | 744 | WP_000140710.1 | C40 family peptidase | - |
| C1P76_RS13410 () | 2537340..2538038 | - | 699 | WP_001152648.1 | phage minor tail protein L | - |
| C1P76_RS13415 () | 2538038..2538367 | - | 330 | WP_000847332.1 | phage tail protein | - |
| C1P76_RS13420 () | 2538364..2540937 | - | 2574 | WP_046891712.1 | phage tail tape measure protein | - |
| C1P76_RS13425 () | 2540918..2541331 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C1P76_RS13430 () | 2541358..2541789 | - | 432 | WP_000479095.1 | phage minor tail protein G | - |
| C1P76_RS13435 () | 2541803..2542414 | - | 612 | Protein_2617 | Ig domain-containing protein | - |
| C1P76_RS13440 () | 2542416..2542811 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| C1P76_RS13445 () | 2542808..2543341 | - | 534 | WP_000974980.1 | phage tail protein | - |
| C1P76_RS13450 () | 2543357..2543709 | - | 353 | Protein_2620 | head-tail joining protein | - |
| C1P76_RS13455 () | 2543702..2544085 | - | 384 | WP_000201502.1 | DNA-packaging protein FI | - |
| C1P76_RS13460 () | 2544136..2545164 | - | 1029 | WP_000522588.1 | major capsid protein | - |
| C1P76_RS13465 () | 2545222..2545569 | - | 348 | WP_000256833.1 | head decoration protein | - |
| C1P76_RS13470 () | 2545606..2547112 | - | 1507 | Protein_2624 | S49 family peptidase | - |
| C1P76_RS13475 () | 2547102..2548694 | - | 1593 | WP_005046188.1 | phage portal protein | - |
| C1P76_RS13480 () | 2548691..2548897 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| C1P76_RS13485 () | 2548881..2550808 | - | 1928 | Protein_2627 | phage terminase large subunit family protein | - |
| C1P76_RS13490 () | 2550780..2551328 | - | 549 | WP_000867569.1 | terminase small subunit | - |
| C1P76_RS27800 () | 2551771..2552238 | - | 468 | WP_001082562.1 | lysis protein | - |
| C1P76_RS13500 () | 2552537..2553070 | - | 534 | WP_000992072.1 | lysozyme | - |
| C1P76_RS13505 () | 2553176..2553448 | + | 273 | WP_000369850.1 | hypothetical protein | - |
| C1P76_RS13510 () | 2553414..2553758 | - | 345 | WP_000193262.1 | YdfR family protein | - |
| C1P76_RS13515 () | 2553763..2553978 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C1P76_RS13525 () | 2555465..2557321 | - | 1857 | WP_000874316.1 | SASA family carbohydrate esterase | - |
| C1P76_RS13530 () | 2557581..2557916 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P76_RS27805 () | 2557987..2558112 | + | 126 | Protein_2637 | hypothetical protein | - |
| C1P76_RS13540 () | 2558665..2558775 | - | 111 | WP_046891796.1 | DUF3927 family protein | - |
| C1P76_RS13555 () | 2559065..2560123 | - | 1059 | WP_000935541.1 | site-specific DNA-methyltransferase | - |
| C1P76_RS13560 () | 2560231..2560471 | - | 241 | Protein_2640 | hypothetical protein | - |
| C1P76_RS13565 () | 2560698..2561519 | - | 822 | WP_069661440.1 | antitermination protein | - |
| C1P76_RS13570 () | 2561516..2561890 | - | 375 | WP_000904094.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P76_RS13575 () | 2561903..2562949 | - | 1047 | WP_001265099.1 | DUF968 domain-containing protein | - |
| C1P76_RS13580 () | 2562951..2563229 | - | 279 | WP_032335658.1 | hypothetical protein | - |
| C1P76_RS13585 () | 2563296..2563547 | - | 252 | WP_000980988.1 | protein Rem | - |
| C1P76_RS13590 () | 2563764..2563919 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2563931..2563989 | + | 59 | - | - | Antitoxin Detail |
| C1P76_RS13595 () | 2564211..2564444 | - | 234 | WP_000350274.1 | hypothetical protein | - |
| C1P76_RS13605 () | 2565887..2566054 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| C1P76_RS13610 () | 2566065..2566328 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| C1P76_RS13615 () | 2566330..2566548 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| C1P76_RS13620 () | 2566550..2566765 | - | 216 | WP_000510389.1 | hypothetical protein | - |
| C1P76_RS13625 () | 2566766..2567125 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| C1P76_RS27810 () | 2567122..2567298 | - | 177 | WP_000753053.1 | hypothetical protein | - |
| C1P76_RS13630 () | 2567291..2567473 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| C1P76_RS13635 () | 2567569..2567925 | - | 357 | WP_000403782.1 | hypothetical protein | - |
| C1P76_RS13640 () | 2567903..2568364 | - | 462 | WP_001209470.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| C1P76_RS13645 () | 2568361..2568657 | - | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| C1P76_RS13650 () | 2568654..2569046 | - | 393 | WP_001141099.1 | DUF977 family protein | - |
| C1P76_RS13655 () | 2569062..2569832 | - | 771 | WP_000450707.1 | DUF1627 domain-containing protein | - |
| C1P76_RS13660 () | 2569866..2570327 | - | 462 | WP_000139457.1 | replication protein P | - |
| C1P76_RS13665 () | 2570320..2571360 | - | 1041 | WP_000020542.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C1P76_RS13670 () | 2571332..2571883 | - | 552 | WP_000705383.1 | toxin YdaT family protein | - |
| C1P76_RS13675 () | 2571867..2572094 | - | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| C1P76_RS13680 () | 2572172..2572579 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| C1P76_RS13685 () | 2572769..2572921 | + | 153 | WP_000379596.1 | DUF1391 family protein | - |
| C1P76_RS13690 () | 2572933..2573307 | + | 375 | WP_005031383.1 | hypothetical protein | - |
| C1P76_RS13695 () | 2573939..2574636 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C1P76_RS13700 () | 2574646..2574804 | + | 159 | WP_032335657.1 | cell division inhibition protein DicB | - |
| C1P76_RS13705 () | 2574801..2574989 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| C1P76_RS13710 () | 2575085..2577559 | + | 2475 | WP_000048473.1 | exonuclease | - |
| C1P76_RS13715 () | 2577624..2577872 | + | 249 | WP_000113189.1 | excisionase | - |
| C1P76_RS13720 () | 2577850..2578980 | + | 1131 | WP_000113688.1 | hypothetical protein ; Integrase | Integrase |
| C1P76_RS13725 () | 2579026..2579664 | - | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C1P76_RS13730 () | 2579904..2579993 | + | 90 | Protein_2675 | YkgJ family cysteine cluster protein | - |
| C1P76_RS13735 () | 2580021..2580764 | + | 744 | WP_000028541.1 | YciC family protein | - |
| C1P76_RS13740 () | 2580794..2581333 | + | 540 | WP_000808667.1 | septation protein A | - |
| C1P76_RS13745 () | 2581438..2581836 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C1P76_RS13750 () | 2581876..2582604 | - | 729 | WP_162281807.1 | Protein TonB | VF |
| C1P76_RS13755 () | 2582819..2583115 | + | 297 | WP_000967595.1 | YciI family protein | - |
| C1P76_RS13760 () | 2583415..2584668 | + | 1254 | WP_005031395.1 | voltage-gated potassium channel protein | - |
| C1P76_RS13765 () | 2584723..2584896 | - | 174 | WP_001309467.1 | YciY family protein | - |
| C1P76_RS13770 () | 2585038..2586498 | + | 1461 | WP_000214508.1 | cardiolipin synthase | - |
| C1P76_RS13775 () | 2586533..2586862 | + | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| C1P76_RS13780 () | 2586915..2587919 | - | 1005 | WP_000994889.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| C1P76_RS13785 () | 2587916..2588929 | - | 1014 | WP_000110967.1 | Oligopeptide transport ATP-binding protein OppD | VF |
| C1P76_RS13790 () | 2588941..2589849 | - | 909 | WP_000979650.1 | oligopeptide ABC transporter permease OppC | - |
| C1P76_RS13795 () | 2589864..2590784 | - | 921 | WP_000911111.1 | oligopeptide ABC transporter permease OppB | - |
| C1P76_RS13800 () | 2590870..2592501 | - | 1632 | WP_001297114.1 | oligopeptide ABC transporter substrate-binding protein OppA | - |
| C1P76_RS13805 () | 2592785..2593081 | + | 297 | WP_001211517.1 | hypothetical protein | - |
| C1P76_RS13815 () | 2593945..2594604 | - | 660 | Protein_2692 | AIDA-I family autotransporter YfaL | - |
| C1P76_RS13825 () | 2595477..2596124 | - | 648 | WP_000616554.1 | NAAT family transporter YchE | - |
| C1P76_RS27815 () | 2596155..2596208 | - | 54 | WP_211180492.1 | protein YchT | - |
| C1P76_RS13830 () | 2596602..2599277 | + | 2676 | WP_000301691.1 | Aldehyde-alcohol dehydrogenase | VF |
| C1P76_RS13835 () | 2599401..2600297 | + | 897 | Protein_2697 | IS4 family transposase ISCro3 | Transposase |
| C1P76_RS13840 () | 2600579..2601196 | - | 618 | WP_000250447.1 | thymidine kinase | - |
| C1P76_RS13845 () | 2601792..2602205 | + | 414 | WP_001287378.1 | histone-like nucleoid-structuring protein H-NS | - |
| C1P76_RS13850 () | 2602349..2603257 | - | 909 | WP_000718998.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| C1P76_RS13855 () | 2603458..2604471 | - | 1014 | WP_000193454.1 | Regulator of RpoS | VF |
| C1P76_RS13860 () | 2604563..2605468 | - | 906 | WP_005024994.1 | patatin-like phospholipase RssA | - |
| C1P76_RS13865 () | 2605581..2606039 | + | 459 | WP_024259599.1 | YchJ family protein | - |
| C1P76_RS13870 () | 2606089..2606931 | + | 843 | WP_000555840.1 | formyltetrahydrofolate deformylase | - |
| C1P76_RS13890 () | 2607657..2608334 | - | 678 | WP_001160110.1 | respiratory nitrate reductase subunit gamma | - |
| C1P76_RS13895 () | 2608334..2609044 | - | 711 | WP_000571699.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| C1P76_RS13900 () | 2609041..2610579 | - | 1539 | WP_000702660.1 | nitrate reductase subunit beta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|