MGE detailed information
MGE type: IScluster/Tn MGE length: 25030 bp
Accession: NZ_CP026804 Location: 165602..190631 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Accession: NZ_CP026804 Location: 165602..190631 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS24170 | 160697..161539 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| C1P88_RS24180 | 162022..164924 | + | 2903 | Protein_189 | hypothetical protein | - |
| C1P88_RS24185 | 164954..165278 | - | 325 | Protein_190 | IS3 family transposase | - |
| C1P88_RS25135 | 165276..165467 | + | 192 | Protein_191 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS25725 | 165481..165561 | - | 81 | Protein_192 | hypothetical protein | - |
| C1P88_RS24195 | 165602..166811 | - | 1210 | Protein_193 | IS3 family transposase | - |
| C1P88_RS24200 | 166868..168135 | - | 1268 | Protein_194 | IS4 family transposase IS4 | Transposase |
| C1P88_RS25140 | 168198..168464 | - | 267 | Protein_195 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS24210 | 168821..169411 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P88_RS25730 | 169494..169663 | - | 170 | Protein_197 | type II toxin-antitoxin system toxin YacB | - |
| C1P88_RS24220 | 169663..169932 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P88_RS24225 | 170140..171777 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P88_RS24235 | 172170..172475 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P88_RS24240 | 172477..172695 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P88_RS24245 | 173231..174322 | - | 1092 | Protein_202 | IS66 family transposase ISEc49 | Transposase |
| C1P88_RS24250 | 174330..174901 | + | 572 | Protein_203 | plasmid segregation protein ParM | - |
| C1P88_RS25735 | 174904..175086 | + | 183 | WP_234426364.1 | plasmid partitioning/stability family protein | - |
| C1P88_RS25145 | 175362..175499 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P88_RS24260 | 175631..175906 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P88_RS24265 | 175906..176190 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P88_RS24275 | 176642..176893 | + | 252 | WP_001381727.1 | transporter | - |
| C1P88_RS24280 | 176943..177152 | + | 210 | Protein_209 | peptidoglycan-binding protein | - |
| C1P88_RS24285 | 177252..177437 | - | 186 | Protein_210 | IS21 family transposase IS100 | Transposase |
| C1P88_RS24290 | 177697..179298 | - | 1602 | WP_005080714.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24295 | 179318..179665 | - | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24300 | 179662..180243 | - | 582 | Protein_213 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24305 | 180335..181563 | + | 1229 | WP_134799777.1 | IS3 family transposase IS2 | Transposase |
| C1P88_RS24310 | 181574..181672 | - | 99 | Protein_215 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS24320 | 181871..182341 | + | 471 | Protein_216 | IS1 family transposase IS1N | Transposase |
| C1P88_RS24325 | 182516..182901 | + | 386 | Protein_217 | IS3 family transposase ISSfl10 | Transposase |
| C1P88_RS24335 | 184151..184924 | + | 774 | Protein_219 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS25150 | 185019..185657 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P88_RS24350 | 185772..186019 | + | 248 | Protein_221 | IS3 family transposase ISEae2 | Transposase |
| C1P88_RS24355 | 186107..187148 | + | 1042 | Protein_222 | IS3 family transposase | - |
| C1P88_RS24360 | 187228..187902 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24365 | 187899..188246 | + | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24370 | 188266..189867 | + | 1602 | WP_005079902.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24375 | 189876..190631 | + | 756 | Protein_226 | IS110 family transposase ISSfl8 | Transposase |
| C1P88_RS24385 | 190934..191704 | - | 771 | WP_134799779.1 | hypothetical protein | - |
| C1P88_RS24390 | 191749..192231 | - | 483 | Protein_228 | DUF1380 domain-containing protein | - |
| C1P88_RS24395 | 192191..192412 | - | 222 | WP_001104864.1 | hypothetical protein | - |
| C1P88_RS24400 | 192413..193096 | - | 684 | WP_000086135.1 | DNA methylase | - |
| C1P88_RS24405 | 193160..193471 | - | 312 | WP_032327311.1 | hypothetical protein | - |
| C1P88_RS24410 | 193468..194370 | - | 903 | WP_134799780.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|