MGE detailed information
MGE type: Prophage MGE length: 66783 bp
Accession: NZ_CP026795 Location: 1460678..1527460 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: chromosome
Accession: NZ_CP026795 Location: 1460678..1527460 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B80_RS07495 () | 1455931..1458360 | + | 2430 | WP_000176831.1 | trimethylamine N-oxide reductase TorZ | - |
| C5B80_RS07500 () | 1458525..1459496 | - | 972 | WP_000564746.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| C5B80_RS07505 () | 1459493..1460236 | - | 744 | WP_000019619.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| C5B80_RS07510 () | 1460277..1460603 | - | 327 | Protein_1437 | MAPEG family protein | - |
| C5B80_RS07515 () | 1460678..1461846 | + | 1169 | WP_134796819.1 | IS3 family transposase ISLad1 | Transposase |
| C5B80_RS25955 () | 1461856..1461975 | + | 120 | Protein_1439 | peptidase | - |
| C5B80_RS07525 () | 1461972..1462196 | + | 225 | WP_000620691.1 | hypothetical protein | - |
| C5B80_RS07530 () | 1462193..1463029 | + | 837 | WP_134796788.1 | helix-turn-helix domain-containing protein | - |
| C5B80_RS07535 () | 1463013..1463501 | + | 489 | WP_000055009.1 | PerC family transcriptional regulator | - |
| C5B80_RS07540 () | 1463501..1464154 | + | 654 | WP_000066914.1 | phage N-6-adenine-methyltransferase | - |
| C5B80_RS07545 () | 1464151..1464540 | + | 390 | WP_000767117.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C5B80_RS07550 () | 1464560..1465369 | + | 810 | WP_001061420.1 | KilA-N domain-containing protein | - |
| C5B80_RS07555 () | 1465377..1466366 | + | 990 | WP_012421411.1 | DUF968 domain-containing protein | - |
| C5B80_RS07560 () | 1466384..1466764 | + | 381 | WP_001204806.1 | antitermination protein Q | - |
| C5B80_RS07565 () | 1466980..1467220 | + | 241 | Protein_1448 | hypothetical protein | - |
| C5B80_RS07570 () | 1467328..1468377 | + | 1050 | WP_000935508.1 | site-specific DNA-methyltransferase | - |
| C5B80_RS07590 () | 1468722..1468909 | - | 188 | Protein_1450 | hypothetical protein | - |
| C5B80_RS07605 () | 1469178..1471139 | + | 1962 | Protein_1451 | DUF1737 domain-containing protein | - |
| C5B80_RS07610 () | 1471275..1471409 | + | 135 | WP_000142784.1 | DUF1378 family protein | - |
| C5B80_RS07615 () | 1471450..1472340 | - | 891 | Protein_1453 | IS3 family transposase IS600 | Transposase |
| C5B80_RS07620 () | 1472371..1473962 | - | 1592 | Protein_1454 | IS66 family transposase ISEc43 | Transposase |
| C5B80_RS07625 () | 1473993..1474343 | - | 351 | Protein_1455 | IS66 family transposase ISEc23 | Transposase |
| C5B80_RS07630 () | 1474340..1474759 | - | 420 | WP_000435428.1 | IS66 family transposase IS682 | Transposase |
| C5B80_RS07635 () | 1474859..1475119 | - | 261 | Protein_1457 | IS3 family transposase ISSd1 | Transposase |
| C5B80_RS07640 () | 1475183..1475446 | - | 264 | Protein_1458 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C5B80_RS07645 () | 1475529..1476017 | - | 489 | WP_001307257.1 | hypothetical protein | - |
| C5B80_RS07650 () | 1476120..1477076 | - | 957 | WP_000490384.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| C5B80_RS07655 () | 1477095..1478132 | - | 1038 | Protein_1461 | porin | - |
| C5B80_RS07660 () | 1478404..1479636 | + | 1233 | WP_000777724.1 | maltose ABC transporter substrate-binding protein | - |
| C5B80_RS07665 () | 1479639..1480928 | + | 1290 | WP_001096092.1 | sugar ABC transporter permease | - |
| C5B80_RS07670 () | 1481077..1481762 | + | 686 | Protein_1464 | sugar ABC transporter permease | - |
| C5B80_RS07675 () | 1481780..1482382 | + | 603 | Protein_1465 | alpha amylase N-terminal ig-like domain-containing protein | - |
| C5B80_RS07680 () | 1482449..1483146 | + | 698 | Protein_1466 | IS1 family transposase IS1X2 | Transposase |
| C5B80_RS07685 () | 1483156..1483866 | + | 711 | WP_134810289.1 | amidohydrolase family protein | - |
| C5B80_RS07690 () | 1483959..1484784 | + | 826 | Protein_1468 | alpha/beta hydrolase | - |
| C5B80_RS07695 () | 1484807..1485604 | + | 798 | WP_171765684.1 | Nif3-like dinuclear metal center hexameric protein | - |
| C5B80_RS07700 () | 1485680..1486908 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C5B80_RS07705 () | 1487045..1488487 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| C5B80_RS07710 () | 1488615..1489484 | - | 870 | WP_001056708.1 | DNA-binding transcriptional regulator HexR | - |
| C5B80_RS07715 () | 1489822..1491297 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| C5B80_RS07720 () | 1491532..1493343 | + | 1812 | WP_001069475.1 | phosphogluconate dehydratase | - |
| C5B80_RS07725 () | 1493380..1494021 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C5B80_RS07730 () | 1494077..1495255 | - | 1179 | WP_000173486.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C5B80_RS07735 () | 1495389..1495605 | + | 217 | Protein_1477 | YebG family protein | - |
| C5B80_RS07740 () | 1495672..1496028 | + | 357 | WP_001295500.1 | protein YebF | - |
| C5B80_RS07745 () | 1496342..1497001 | + | 660 | WP_000073510.1 | tellurite resistance TerB family protein | - |
| C5B80_RS07750 () | 1497210..1499277 | + | 2068 | Protein_1480 | oligopeptidase B | - |
| C5B80_RS07755 () | 1499274..1499936 | - | 663 | WP_000944259.1 | exodeoxyribonuclease X | - |
| C5B80_RS07760 () | 1499960..1500616 | - | 657 | WP_134810290.1 | carbon-nitrogen hydrolase family protein | - |
| C5B80_RS07765 () | 1500718..1500948 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C5B80_RS07770 () | 1501087..1501461 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C5B80_RS07775 () | 1501465..1502337 | + | 873 | WP_000879299.1 | copper homeostasis membrane protein CopD | - |
| C5B80_RS07780 () | 1502350..1502691 | + | 342 | WP_000976477.1 | YebY family protein | - |
| - () | 1502719..1502953 | - | 235 | - | - | Antitoxin Detail |
| - () | 1502849..1502952 | + | 104 | - | - | Toxin Detail |
| C5B80_RS07785 () | 1503094..1503621 | - | 528 | Protein_1487 | hypothetical protein ; Integrase | Integrase |
| C5B80_RS07790 () | 1503687..1504843 | + | 1157 | WP_134796787.1 | IS3 family transposase IS600 | Transposase |
| C5B80_RS07795 () | 1504882..1505079 | - | 198 | Protein_1489 | metallophosphoesterase | - |
| C5B80_RS07800 () | 1505362..1506059 | - | 698 | Protein_1490 | IS1 family transposase IS1X2 | Transposase |
| C5B80_RS07810 () | 1506607..1508313 | + | 1707 | WP_000936820.1 | hypothetical protein | VF |
| C5B80_RS25960 () | 1508314..1508493 | - | 180 | WP_001039895.1 | hypothetical protein | - |
| C5B80_RS07820 () | 1508615..1510153 | - | 1539 | WP_134810291.1 | IS66 family transposase ISEc22 | Transposase |
| C5B80_RS07825 () | 1510202..1510549 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B80_RS07830 () | 1510546..1510926 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B80_RS07835 () | 1511018..1511294 | - | 277 | Protein_1496 | IS3 family transposase ISSd1 | Transposase |
| C5B80_RS07840 () | 1511361..1511825 | + | 465 | Protein_1497 | serine/threonine-protein phosphatase | - |
| C5B80_RS07845 () | 1511826..1512017 | - | 192 | WP_000457842.1 | YebW family protein | - |
| C5B80_RS07850 () | 1512122..1512358 | - | 237 | WP_012421427.1 | DUF1480 family protein | - |
| C5B80_RS07855 () | 1512476..1513915 | - | 1440 | WP_024258615.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C5B80_RS07860 () | 1513995..1516628 | - | 2634 | WP_024258614.1 | hypothetical protein | VF |
| C5B80_RS07865 () | 1516597..1517880 | - | 1284 | WP_012421330.1 | membrane integrity lipid transport subunit YebS | - |
| C5B80_RS07870 () | 1518010..1518507 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| C5B80_RS07875 () | 1518604..1519302 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| C5B80_RS07880 () | 1519322..1521370 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| C5B80_RS07885 () | 1521562..1522443 | + | 882 | WP_000984517.1 | protease HtpX | - |
| C5B80_RS07890 () | 1522489..1523862 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| C5B80_RS07895 () | 1524039..1524830 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| C5B80_RS07900 () | 1524973..1525212 | - | 240 | WP_001211009.1 | membrane protein | - |
| C5B80_RS07905 () | 1525371..1525514 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C5B80_RS07910 () | 1525589..1525876 | + | 288 | WP_001006860.1 | YebO family protein | - |
| C5B80_RS07915 () | 1526217..1526914 | + | 698 | Protein_1512 | IS1 family transposase IS1X2 | Transposase |
| C5B80_RS07920 () | 1527095..1527238 | + | 144 | WP_001295496.1 | YobF family protein | - |
| C5B80_RS07925 () | 1527251..1527460 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| C5B80_RS07930 () | 1527626..1528435 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C5B80_RS07935 () | 1528432..1528998 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| C5B80_RS07940 () | 1529426..1529884 | - | 459 | WP_000156249.1 | DUF986 family protein | - |
| C5B80_RS07945 () | 1529939..1530790 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| C5B80_RS07950 () | 1530803..1531603 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|