MGE detailed information
MGE type: Prophage MGE length: 52110 bp
Accession: NZ_CP026793 Location: 2284312..2336421 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Accession: NZ_CP026793 Location: 2284312..2336421 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P81_RS11195 (2279653) | 2279653..2281113 | - | 1461 | WP_000208167.1 | fructuronate reductase | - |
| C1P81_RS11200 (2281194) | 2281194..2282378 | - | 1185 | WP_000438584.1 | mannonate dehydratase | - |
| C1P81_RS11205 (2282718) | 2282718..2284061 | + | 1344 | WP_000558239.1 | gluconate permease GntP | - |
| C1P81_RS11210 (2284312) | 2284312..2285214 | - | 903 | WP_000816511.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| C1P81_RS11215 (2285234) | 2285234..2285737 | - | 504 | WP_000870598.1 | type 1 fimbria minor subunit FimG | - |
| C1P81_RS11220 (2285750) | 2285750..2286280 | - | 531 | WP_001244836.1 | type 1 fimbria minor subunit FimF | - |
| C1P81_RS11225 (2286290) | 2286290..2288338 | - | 2049 | Protein_2143 | fimbrial usher FimD | - |
| C1P81_RS11235 (2289103) | 2289103..2289702 | - | 600 | Protein_2145 | FimD/PapC N-terminal domain-containing protein | - |
| C1P81_RS11240 (2289769) | 2289769..2290494 | - | 726 | WP_000066552.1 | type 1 fimbria chaperone FimC | - |
| C1P81_RS11245 (2290531) | 2290531..2291070 | - | 540 | WP_000824103.1 | fimbrial protein | - |
| C1P81_RS11250 (2291135) | 2291135..2291683 | - | 549 | WP_000695529.1 | type 1 fimbrial major subunit FimA | - |
| C1P81_RS11255 (2292164) | 2292164..2292760 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| C1P81_RS11260 (2293238) | 2293238..2293840 | - | 603 | Protein_2150 | type 1 fimbria switch DNA invertase FimB | - |
| C1P81_RS11265 (2295294) | 2295294..2296010 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C1P81_RS11270 (2296030) | 2296030..2297136 | + | 1107 | WP_005048917.1 | N-acetylneuraminate epimerase | - |
| C1P81_RS11275 (2297201) | 2297201..2298181 | + | 981 | WP_000991455.1 | sialate O-acetylesterase | - |
| C1P81_RS26800 (2298291) | 2298291..2298496 | + | 206 | Protein_2154 | HNH endonuclease | - |
| C1P81_RS11285 (2299397) | 2299397..2300137 | + | 741 | WP_050597212.1 | DeoR family transcriptional regulator | - |
| C1P81_RS26350 (2300139) | 2300139..2300365 | - | 227 | Protein_2157 | acetolactate synthase small subunit | - |
| C1P81_RS11295 (2300613) | 2300613..2300896 | + | 284 | Protein_2158 | transposase | - |
| C1P81_RS11300 (2300960) | 2300960..2302116 | + | 1157 | WP_094081518.1 | IS3-like element IS600 family transposase | - |
| C1P81_RS11305 (2302158) | 2302158..2303027 | + | 870 | Protein_2160 | IS3 family transposase | - |
| C1P81_RS11310 (2303046) | 2303046..2303279 | - | 234 | Protein_2161 | DUF2686 family protein | - |
| C1P81_RS11315 (2303551) | 2303551..2304248 | + | 698 | WP_227804274.1 | IS1 family transposase | - |
| C1P81_RS11320 (2304264) | 2304264..2304350 | - | 87 | Protein_2163 | DUF3811 domain-containing protein | - |
| C1P81_RS11325 (2304441) | 2304441..2304880 | + | 440 | Protein_2164 | transposase | - |
| C1P81_RS11330 (2304975) | 2304975..2306203 | + | 1229 | WP_167389526.1 | IS3-like element IS2 family transposase | - |
| C1P81_RS11335 (2306220) | 2306220..2306945 | + | 726 | Protein_2166 | IS3-like element IS911 family transposase | - |
| C1P81_RS11340 (2306920) | 2306920..2308131 | - | 1212 | WP_001218324.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C1P81_RS26355 (2308596) | 2308596..2308745 | - | 150 | Protein_2168 | restriction endonuclease subunit M | - |
| C1P81_RS11355 (2308830) | 2308830..2309027 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| C1P81_RS11360 (2309039) | 2309039..2309527 | - | 489 | WP_039076630.1 | DUF5983 family protein | - |
| C1P81_RS11365 (2309524) | 2309524..2309898 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| C1P81_RS11370 (2309988) | 2309988..2310356 | - | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C1P81_RS11375 (2310519) | 2310519..2310740 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| C1P81_RS11380 (2310827) | 2310827..2311303 | - | 477 | WP_032182966.1 | RadC family protein | - |
| C1P81_RS11385 (2311319) | 2311319..2311804 | - | 486 | WP_000849588.1 | antirestriction protein | - |
| C1P81_RS11390 (2311859) | 2311859..2312679 | - | 821 | Protein_2176 | DUF945 domain-containing protein | - |
| C1P81_RS26805 (2312858) | 2312858..2313013 | - | 156 | WP_001119723.1 | DUF905 family protein | - |
| C1P81_RS11400 (2313092) | 2313092..2313547 | - | 456 | WP_000581498.1 | IrmA family protein | - |
| C1P81_RS11405 (2313623) | 2313623..2316139 | - | 2517 | WP_032358729.1 | membrane protein | - |
| C1P81_RS11410 (2316260) | 2316260..2319379 | - | 3120 | WP_032358730.1 | autotransporter adhesin Ag43 | - |
| C1P81_RS11415 (2319713) | 2319713..2320585 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| C1P81_RS11420 (2320695) | 2320695..2321714 | - | 1020 | WP_001330680.1 | hypothetical protein | - |
| C1P81_RS11435 (2323667) | 2323667..2323774 | - | 108 | Protein_2184 | IS1 family transposase | - |
| C1P81_RS11445 (2323983) | 2323983..2324555 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| C1P81_RS11450 (2324641) | 2324641..2324847 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| C1P81_RS11455 (2325546) | 2325546..2325755 | + | 210 | WP_000453332.1 | hemolysin expression modulator Hha | - |
| C1P81_RS11460 (2326428) | 2326428..2326997 | + | 570 | WP_021547866.1 | inovirus Gp2 family protein | - |
| C1P81_RS11465 (2327257) | 2327257..2327658 | + | 402 | WP_000270971.1 | putative zinc ribbon protein | - |
| C1P81_RS11470 (2327646) | 2327646..2328080 | + | 435 | WP_001221620.1 | zinc-ribbon domain-containing protein | - |
| C1P81_RS11480 (2328414) | 2328414..2328815 | + | 402 | WP_000536902.1 | transposase | - |
| C1P81_RS11485 (2328812) | 2328812..2329159 | + | 348 | WP_032342131.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS11490 (2329209) | 2329209..2330594 | + | 1386 | Protein_2193 | IS66 family transposase | - |
| C1P81_RS11495 (2330833) | 2330833..2332191 | - | 1359 | WP_000823238.1 | esterase-like activity of phytase family protein | - |
| C1P81_RS11500 (2332473) | 2332473..2332604 | + | 132 | Protein_2195 | IS3 family transposase | - |
| C1P81_RS11510 (2332942) | 2332942..2333235 | - | 294 | WP_000239862.1 | biofilm development regulator YmgB/AriR family protein | - |
| C1P81_RS11515 (2333539) | 2333539..2333643 | - | 105 | Protein_2197 | IS3 family transposase | - |
| C1P81_RS26810 (2333670) | 2333670..2333819 | - | 150 | Protein_2198 | IS3 family transposase | - |
| C1P81_RS11520 (2333888) | 2333888..2333950 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| C1P81_RS11525 (2333961) | 2333961..2334658 | - | 698 | Protein_2200 | IS1 family transposase | - |
| C1P81_RS26815 (2334745) | 2334745..2334813 | - | 69 | WP_212738294.1 | hypothetical protein | - |
| C1P81_RS11530 (2334950) | 2334950..2335471 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| C1P81_RS11535 (2335468) | 2335468..2336421 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| C1P81_RS11540 (2336508) | 2336508..2338832 | + | 2325 | WP_000188285.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| C1P81_RS11545 (2338877) | 2338877..2339779 | + | 903 | WP_000879154.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| C1P81_RS11550 (2339776) | 2339776..2340774 | + | 999 | WP_000125177.1 | iron-dicitrate ABC transporter permease FecC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|