MGE detailed information
MGE type: IScluster/Tn MGE length: 44562 bp
Accession: NZ_CP026785 Location: 59874..104435 Organism: Shigella dysenteriae strain 80-547 Replicon: plasmid unnamed
Accession: NZ_CP026785 Location: 59874..104435 Organism: Shigella dysenteriae strain 80-547 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B79_RS24300 () | 55081..55923 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C5B79_RS24305 () | 56287..56469 | - | 183 | WP_134795997.1 | hypothetical protein | - |
| C5B79_RS24310 () | 56405..59317 | + | 2913 | WP_023636847.1 | ankyrin repeat protein | - |
| C5B79_RS24315 () | 59347..59671 | - | 325 | Protein_63 | IS3 family transposase | - |
| C5B79_RS26610 () | 59669..59860 | + | 192 | Protein_64 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B79_RS24325 () | 59874..61220 | - | 1347 | Protein_65 | IS4 family transposase IS4 | Transposase |
| C5B79_RS26615 () | 61283..61567 | - | 285 | Protein_66 | IS66 family transposase ISCro1 | Transposase |
| C5B79_RS24335 () | 61906..62496 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C5B79_RS26790 () | 62525..62751 | - | 227 | Protein_68 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5B79_RS24345 () | 62748..63017 | - | 270 | WP_000079957.1 | hypothetical protein | - |
| C5B79_RS24350 () | 63225..64862 | - | 1638 | WP_000936810.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C5B79_RS24360 () | 65898..65993 | - | 96 | Protein_72 | transposase domain-containing protein | - |
| C5B79_RS24365 () | 66029..66334 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5B79_RS24370 () | 66336..66554 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5B79_RS24375 () | 66794..67487 | + | 694 | Protein_75 | IS1 family transposase | - |
| C5B79_RS24380 () | 67863..68953 | - | 1091 | Protein_76 | IS66 family transposase ISEc49 | Transposase |
| C5B79_RS24385 () | 68961..69529 | + | 569 | Protein_77 | plasmid segregation protein ParM | - |
| C5B79_RS24390 () | 69532..69897 | + | 366 | WP_000361390.1 | plasmid partitioning/stability family protein | - |
| C5B79_RS26620 () | 69989..70126 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C5B79_RS24395 () | 70258..70533 | - | 276 | WP_000421263.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B79_RS24400 () | 70533..70817 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C5B79_RS24415 () | 71569..71778 | + | 210 | Protein_82 | peptidoglycan-binding protein | - |
| C5B79_RS24420 () | 71878..72063 | - | 186 | Protein_83 | IS21 family transposase IS100 | Transposase |
| C5B79_RS24430 () | 72399..72868 | + | 470 | Protein_84 | IS1 family transposase IS1N | Transposase |
| C5B79_RS26625 () | 73027..73665 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C5B79_RS24440 () | 73780..74313 | + | 534 | Protein_86 | transposase | - |
| C5B79_RS26630 () | 74368..74508 | + | 141 | Protein_87 | IS3 family transposase IS2 | Transposase |
| C5B79_RS24445 () | 74573..74973 | + | 401 | Protein_88 | IS3 family transposase ISSfl10 | Transposase |
| C5B79_RS24450 () | 75029..75726 | + | 698 | Protein_89 | IS1 family transposase | - |
| C5B79_RS24455 () | 75742..76506 | + | 765 | Protein_90 | IS3 family transposase ISSd1 | Transposase |
| C5B79_RS26795 () | 76475..76550 | - | 76 | Protein_91 | aspartate oxidase | - |
| C5B79_RS24460 () | 76551..76874 | - | 324 | Protein_92 | DUF1281 domain-containing protein | - |
| C5B79_RS24470 () | 77313..78272 | + | 960 | WP_000921950.1 | plasmid segregation protein ParM | - |
| C5B79_RS24475 () | 78272..78667 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C5B79_RS24480 () | 78847..79227 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C5B79_RS24485 () | 79273..80117 | + | 845 | WP_134802192.1 | IS5 family transposase ISSfl7 | Transposase |
| C5B79_RS24495 () | 80266..81720 | - | 1455 | WP_000701102.1 | hypothetical protein | VF |
| C5B79_RS24500 () | 82145..82989 | + | 845 | Protein_98 | IS5 family transposase ISSfl7 | Transposase |
| C5B79_RS24505 () | 83159..83908 | - | 750 | WP_000828660.1 | phosphatase PAP2 family protein | - |
| C5B79_RS24510 () | 84323..85016 | - | 694 | Protein_100 | IS1 family transposase | - |
| C5B79_RS24515 () | 85081..86733 | - | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C5B79_RS24520 () | 87074..88283 | - | 1210 | Protein_102 | IS3 family transposase IS629 | Transposase |
| C5B79_RS24525 () | 88349..88516 | - | 168 | Protein_103 | IS3 family transposase ISKpn38 | Transposase |
| C5B79_RS24530 () | 88557..88898 | - | 342 | Protein_104 | IS4 family transposase ISEc13 | Transposase |
| C5B79_RS24535 () | 88877..89583 | - | 707 | Protein_105 | IS256 family transposase IS1414 | Transposase |
| C5B79_RS24540 () | 89786..90480 | + | 695 | WP_134801557.1 | IS1-like element IS1N family transposase | - |
| C5B79_RS24545 () | 90546..92243 | - | 1698 | WP_005015229.1 | hypothetical protein | VF |
| C5B79_RS24550 () | 92319..92453 | + | 135 | Protein_108 | IS1 family transposase | - |
| C5B79_RS24555 () | 92552..93964 | - | 1413 | WP_011379035.1 | hypothetical protein | VF |
| C5B79_RS24565 () | 94975..95532 | + | 558 | Protein_110 | IS110 family transposase ISEc11 | Transposase |
| C5B79_RS24570 () | 95579..96788 | + | 1210 | Protein_111 | IS3 family transposase IS629 | Transposase |
| C5B79_RS24580 () | 96983..97677 | + | 695 | WP_134802015.1 | IS1 family transposase | - |
| C5B79_RS24585 () | 97692..98128 | - | 437 | Protein_113 | IS3 family transposase ISSfl11 | Transposase |
| C5B79_RS26635 () | 98167..98319 | + | 153 | WP_011114782.1 | hypothetical protein | - |
| C5B79_RS26800 () | 98677..98820 | + | 144 | Protein_115 | IS1 family transposase | - |
| C5B79_RS24595 () | 98966..99232 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| C5B79_RS24600 () | 99620..101347 | + | 1728 | WP_024263018.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B79_RS24605 () | 101377..101532 | - | 156 | Protein_118 | IS256 family transposase ISEc39 | Transposase |
| C5B79_RS24620 () | 102828..103525 | + | 698 | Protein_120 | IS1 family transposase | - |
| C5B79_RS24625 () | 103541..104435 | + | 895 | Protein_121 | IS3 family transposase IS600 | Transposase |
| C5B79_RS24630 () | 104480..104729 | + | 250 | Protein_122 | IS1 family transposase | - |
| C5B79_RS24635 () | 104746..104925 | - | 180 | Protein_123 | transposase | - |
| C5B79_RS24640 () | 105255..106952 | + | 1698 | WP_134801822.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C5B79_RS24645 () | 107380..109104 | + | 1725 | WP_011379044.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|