MGE detailed information
MGE type: IScluster/Tn MGE length: 20408 bp
Accession: NZ_CP026783 Location: 4113..24520 Organism: Shigella dysenteriae strain 08-3380 Replicon: plasmid unnamed
Accession: NZ_CP026783 Location: 4113..24520 Organism: Shigella dysenteriae strain 08-3380 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P64_RS25285 () | 36..965 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P64_RS25290 () | 1915..2694 | - | 780 | WP_024263024.1 | type III secretion system effector cysteine protease IpaJ | - |
| C1P64_RS25295 () | 4046..5039 | + | 994 | Protein_2 | IS21 family transposase IS100kyp | Transposase |
| C1P64_RS25300 () | 5231..6427 | + | 1197 | WP_011379003.1 | IS110 family transposase ISEc20 | Transposase |
| C1P64_RS27095 () | 6476..7313 | - | 838 | Protein_4 | IS4 family transposase ISEc13 | Transposase |
| C1P64_RS26885 () | 7296..7637 | - | 342 | Protein_5 | IS4 family transposase ISEc13 | Transposase |
| C1P64_RS25310 () | 7752..8552 | - | 801 | Protein_6 | IS3 family transposase | - |
| C1P64_RS25325 () | 10091..11545 | - | 1455 | WP_011379007.1 | hypothetical protein | VF |
| C1P64_RS25330 () | 11886..12059 | + | 174 | WP_011379008.1 | transposase | - |
| C1P64_RS25340 () | 12196..12720 | + | 525 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| C1P64_RS25350 () | 12803..13075 | + | 273 | WP_000019161.1 | hypothetical protein | - |
| C1P64_RS25355 () | 13056..14198 | + | 1143 | Protein_12 | IS91 family transposase ISSbo1 | Transposase |
| C1P64_RS25360 () | 14331..15065 | + | 735 | Protein_13 | IS21 family transposase IS100kyp | Transposase |
| C1P64_RS25365 () | 15479..15781 | + | 303 | WP_162147618.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P64_RS25370 () | 15772..16254 | + | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P64_RS25375 () | 16322..16845 | + | 524 | Protein_16 | IS3 family transposase ISSfl11 | Transposase |
| C1P64_RS27100 () | 16888..17571 | - | 684 | Protein_17 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P64_RS27105 () | 17554..18351 | - | 798 | Protein_18 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P64_RS25385 () | 18426..18698 | + | 273 | WP_000019161.1 | hypothetical protein | - |
| C1P64_RS25390 () | 18679..19887 | + | 1209 | WP_000198558.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P64_RS25395 () | 20997..21854 | - | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| C1P64_RS25400 () | 21847..21921 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P64_RS25410 () | 22145..22405 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P64_RS25415 () | 22645..23157 | - | 513 | Protein_24 | DUF2726 domain-containing protein | - |
| C1P64_RS25425 () | 23205..23899 | + | 695 | WP_134801812.1 | IS1 family transposase | - |
| C1P64_RS25430 () | 24048..24191 | - | 144 | Protein_26 | transcriptional regulator | - |
| C1P64_RS25440 () | 24248..24942 | + | 695 | WP_134801577.1 | IS1-like element IS1N family transposase | - |
| C1P64_RS27110 () | 24956..25030 | - | 75 | Protein_28 | transcriptional regulator | - |
| C1P64_RS25445 () | 25076..25393 | - | 318 | Protein_29 | thermonuclease family protein | - |
| C1P64_RS25450 () | 25440..26137 | + | 698 | Protein_30 | IS1 family transposase | - |
| C1P64_RS25455 () | 26153..26314 | - | 162 | Protein_31 | endonuclease | - |
| C1P64_RS25465 () | 26558..26770 | - | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| C1P64_RS25470 () | 26901..27461 | - | 561 | WP_000139365.1 | fertility inhibition protein FinO | - |
| C1P64_RS25475 () | 27516..28262 | - | 747 | WP_000205723.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|