MGE detailed information
MGE type: Prophage MGE length: 26258 bp
Accession: NZ_CP026774 Location: 1631911..1658168 Organism: Shigella dysenteriae strain ATCC 13313 Replicon: chromosome
Accession: NZ_CP026774 Location: 1631911..1658168 Organism: Shigella dysenteriae strain ATCC 13313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P61_RS09230 () | 1627525..1630497 | + | 2973 | Protein_1727 | bacteriophage adsorption protein NfrA | - |
| C1P61_RS09235 () | 1630498..1631388 | + | 891 | Protein_1728 | DUF4434 family protein | - |
| C1P61_RS09240 () | 1631571..1631897 | + | 327 | Protein_1729 | DNA-binding transcriptional regulator EnvY | - |
| C1P61_RS09250 () | 1632663..1632902 | + | 240 | Protein_1731 | DNA-binding transcriptional regulator EnvY | - |
| C1P61_RS09255 () | 1632960..1633656 | + | 697 | Protein_1732 | IS1-like element IS1N family transposase | - |
| C1P61_RS09260 () | 1633670..1633882 | + | 213 | Protein_1733 | helix-turn-helix transcriptional regulator | - |
| C1P61_RS09270 () | 1634171..1634855 | - | 685 | Protein_1734 | IS1 family transposase | - |
| C1P61_RS09275 () | 1634910..1635254 | - | 345 | Protein_1735 | fimbria/pilus periplasmic chaperone | - |
| C1P61_RS09285 () | 1636236..1636553 | - | 318 | Protein_1737 | transposase | - |
| C1P61_RS09290 () | 1636729..1637478 | - | 750 | WP_011378552.1 | C40 family peptidase | - |
| C1P61_RS09295 () | 1637688..1637948 | + | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C1P61_RS09300 () | 1637951..1638229 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C1P61_RS09305 () | 1638385..1639125 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C1P61_RS09310 () | 1639096..1639863 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C1P61_RS09315 () | 1640069..1640647 | - | 579 | WP_005020694.1 | D-sedoheptulose 7-phosphate isomerase | - |
| C1P61_RS09320 () | 1640887..1643331 | + | 2445 | Protein_1744 | acyl-CoA dehydrogenase FadE | - |
| C1P61_RS09325 () | 1643374..1643820 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C1P61_RS09330 () | 1644001..1644771 | + | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| C1P61_RS09335 () | 1644935..1646143 | - | 1209 | Protein_1747 | IS256-like element ISEc39 family transposase | - |
| C1P61_RS09345 () | 1646913..1647197 | + | 285 | Protein_1749 | type VI secretion system tube protein Hcp | - |
| C1P61_RS09350 () | 1647218..1647370 | + | 153 | WP_001414527.1 | hypothetical protein | - |
| C1P61_RS09355 () | 1647386..1647997 | + | 612 | Protein_1751 | peptidoglycan-binding protein LysM | - |
| C1P61_RS09360 () | 1648053..1648746 | + | 694 | Protein_1752 | IS1 family transposase | - |
| C1P61_RS09365 () | 1648762..1648887 | + | 126 | Protein_1753 | peptidoglycan-binding protein | - |
| C1P61_RS09370 () | 1648890..1649144 | + | 255 | WP_005020710.1 | hypothetical protein | - |
| C1P61_RS09375 () | 1649195..1649892 | + | 698 | Protein_1755 | IS1 family transposase | - |
| C1P61_RS09385 () | 1650333..1651064 | - | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| C1P61_RS09390 () | 1651129..1651596 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| C1P61_RS09395 () | 1651593..1652315 | - | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| C1P61_RS09400 () | 1652349..1653104 | + | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| C1P61_RS09405 () | 1653176..1654534 | + | 1359 | WP_000644696.1 | murein transglycosylase D | - |
| C1P61_RS09410 () | 1654582..1655336 | - | 755 | Protein_1761 | class I SAM-dependent methyltransferase | - |
| C1P61_RS09415 () | 1655414..1656214 | - | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C1P61_RS09420 () | 1656455..1657369 | + | 915 | WP_000648592.1 | LysR family transcriptional regulator | - |
| C1P61_RS09425 () | 1657366..1658168 | - | 803 | Protein_1764 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|