MGE detailed information
MGE type: Conjugative plasmid MGE length: 82058 bp
Accession: NZ_CP026698 Location: 1..82058 Organism: Citrobacter koseri strain AR_0025 Replicon: plasmid unitig_2_pilon
Accession: NZ_CP026698 Location: 1..82058 Organism: Citrobacter koseri strain AR_0025 Replicon: plasmid unitig_2_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM352_RS23545 () | 1368..2372 | - | 1005 | Protein_1 | tyrosine-type recombinase/integrase | - |
| AM352_RS23550 () | 2446..2673 | - | 228 | Protein_2 | DNA polymerase V subunit UmuC | - |
| AM352_RS23555 () | 2673..3095 | - | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM352_RS23560 () | 3275..3946 | - | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| AM352_RS23565 () | 4306..4983 | + | 678 | WP_022652244.1 | DNA methylase | - |
| AM352_RS23570 () | 4983..5204 | + | 222 | WP_022652245.1 | hypothetical protein | - |
| AM352_RS23575 () | 5215..5634 | + | 420 | WP_022652246.1 | DUF1380 domain-containing protein | - |
| AM352_RS23580 () | 5688..6467 | + | 780 | WP_022652247.1 | hypothetical protein | - |
| AM352_RS23590 () | 6874..7380 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| AM352_RS23595 () | 7423..7614 | + | 192 | WP_022652248.1 | hypothetical protein | - |
| AM352_RS23600 () | 7806..8060 | + | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| AM352_RS23605 () | 8095..8412 | + | 318 | WP_022652250.1 | hypothetical protein | - |
| AM352_RS24430 () | 8588..8800 | + | 213 | WP_042934573.1 | hypothetical protein | - |
| AM352_RS23615 () | 9038..9268 | + | 231 | WP_008324190.1 | DUF905 domain-containing protein | - |
| AM352_RS23620 () | 9339..11348 | + | 2010 | WP_008324188.1 | ParB/RepB/Spo0J family partition protein | - |
| AM352_RS23625 () | 11391..11822 | + | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| AM352_RS23630 () | 11819..12547 | + | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| AM352_RS23635 () | 12544..12867 | + | 324 | WP_008324183.1 | hypothetical protein | - |
| AM352_RS23640 () | 12929..13269 | + | 341 | Protein_19 | hypothetical protein | - |
| AM352_RS23645 () | 13492..15027 | - | 1536 | WP_001000409.1 | IS66 family transposase | - |
| AM352_RS23650 () | 15077..15424 | - | 348 | WP_000609174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AM352_RS23655 () | 15421..15804 | - | 384 | WP_001201739.1 | IS66 family insertion sequence hypothetical protein | - |
| AM352_RS23660 () | 16361..16735 | + | 375 | WP_008324180.1 | hypothetical protein | - |
| AM352_RS23665 () | 16789..17076 | + | 288 | WP_008324178.1 | hypothetical protein | - |
| AM352_RS23670 () | 17123..17467 | + | 345 | WP_022652252.1 | hypothetical protein | - |
| AM352_RS23675 () | 17553..17816 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| AM352_RS23680 () | 17859..18689 | + | 831 | WP_022652253.1 | type I restriction-modification system subunit M | - |
| AM352_RS23685 () | 19316..19846 | + | 531 | WP_008324170.1 | antirestriction protein | - |
| AM352_RS23690 () | 19893..20369 | - | 477 | WP_008324168.1 | transglycosylase SLT domain-containing protein | - |
| AM352_RS23695 () | 20801..21193 | + | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| AM352_RS23700 () | 21382..22071 | + | 690 | WP_008324166.1 | hypothetical protein | - |
| AM352_RS23705 () | 22158..22382 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| AM352_RS23710 () | 22440..22790 | + | 351 | WP_008324162.1 | type IV conjugative transfer system pilin TraA | - |
| AM352_RS23715 () | 22941..23246 | + | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| AM352_RS23720 () | 23261..23827 | + | 567 | WP_008324158.1 | type IV conjugative transfer system protein TraE | - |
| AM352_RS23725 () | 23814..24557 | + | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| AM352_RS23730 () | 24544..25938 | + | 1395 | WP_008324156.1 | conjugal transfer protein TraB | - |
| AM352_RS23735 () | 25960..26499 | + | 540 | WP_008324154.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM352_RS23740 () | 26619..26843 | + | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| AM352_RS23745 () | 26847..27032 | + | 186 | WP_022652254.1 | hypothetical protein | - |
| AM352_RS23750 () | 27016..27417 | + | 402 | WP_008324137.1 | hypothetical protein | - |
| AM352_RS23755 () | 27407..27973 | + | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| AM352_RS23760 () | 27966..30596 | + | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| AM352_RS23765 () | 30593..30940 | + | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| AM352_RS23770 () | 30940..31587 | + | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| AM352_RS23775 () | 31590..32576 | + | 987 | WP_032160671.1 | conjugal transfer pilus assembly protein TraU | - |
| AM352_RS23780 () | 32593..33222 | + | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM352_RS23785 () | 33219..35072 | + | 1854 | WP_022652255.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM352_RS23790 () | 35104..35292 | + | 189 | WP_008324128.1 | hypothetical protein | - |
| AM352_RS23795 () | 35323..36072 | + | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM352_RS23800 () | 36089..36337 | + | 249 | WP_008324126.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM352_RS23805 () | 36327..36881 | + | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM352_RS23810 () | 36874..37302 | + | 429 | WP_008324122.1 | hypothetical protein | - |
| AM352_RS23815 () | 37289..38659 | + | 1371 | WP_016247527.1 | conjugal transfer protein TraH | - |
| AM352_RS23820 () | 38659..41481 | + | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM352_RS23825 () | 41503..41934 | + | 432 | WP_008324118.1 | entry exclusion protein | - |
| AM352_RS23830 () | 42009..42683 | + | 675 | WP_008324909.1 | sel1 repeat family protein | - |
| AM352_RS23835 () | 42834..43865 | + | 1032 | WP_001395480.1 | IS630-like element ISEc33 family transposase | - |
| AM352_RS23840 () | 43972..46173 | + | 2202 | WP_023307203.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM352_RS23845 () | 46173..51413 | + | 5241 | WP_022652257.1 | conjugative transfer relaxase/helicase TraI | - |
| AM352_RS23850 () | 51415..52152 | + | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AM352_RS23855 () | 52219..52938 | + | 720 | WP_022652258.1 | fertility inhibition protein FinO | - |
| AM352_RS23860 () | 52931..53722 | + | 792 | WP_008324924.1 | DsbA family protein | - |
| AM352_RS23865 () | 53870..54415 | + | 546 | WP_008324931.1 | phospholipase D family protein | - |
| AM352_RS23870 () | 54567..54845 | + | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| AM352_RS23880 () | 55064..55141 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| AM352_RS23885 () | 55122..55997 | + | 876 | WP_085952537.1 | incFII family plasmid replication initiator RepA | - |
| AM352_RS23895 () | 57163..57860 | - | 698 | Protein_68 | IS1 family transposase | - |
| AM352_RS23900 () | 58130..59152 | + | 1023 | WP_001567660.1 | IS110 family transposase | - |
| AM352_RS23905 () | 59446..59753 | - | 308 | Protein_70 | IS1 family transposase | - |
| AM352_RS23915 () | 60230..60970 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| AM352_RS23920 () | 61296..62285 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| AM352_RS23925 () | 63141..63410 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AM352_RS23930 () | 63414..63944 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AM352_RS23940 () | 64076..64969 | + | 894 | WP_077873527.1 | IS5 family transposase | - |
| AM352_RS23945 () | 65110..66006 | - | 897 | Protein_76 | IS3 family transposase | - |
| AM352_RS23955 () | 66071..67222 | + | 1152 | WP_022652315.1 | IS30-like element IS30 family transposase | - |
| AM352_RS23960 () | 67331..67714 | + | 384 | WP_001201739.1 | IS66 family insertion sequence hypothetical protein | - |
| AM352_RS23965 () | 67711..68058 | + | 348 | WP_000609174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AM352_RS23970 () | 68108..69643 | + | 1536 | WP_001000409.1 | IS66 family transposase | - |
| AM352_RS23975 () | 69700..71040 | - | 1341 | WP_008786676.1 | IS110 family transposase | - |
| AM352_RS23980 () | 71271..71513 | - | 243 | Protein_82 | transposase | - |
| AM352_RS23985 () | 71884..73050 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| AM352_RS23990 () | 73050..74015 | + | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM352_RS23995 () | 74748..75790 | - | 1043 | Protein_85 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AM352_RS24005 () | 76044..78182 | + | 2139 | WP_022652236.1 | hypothetical protein | - |
| AM352_RS24010 () | 78516..79919 | + | 1404 | WP_072200700.1 | DNA cytosine methyltransferase | - |
| AM352_RS24015 () | 79953..81167 | - | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|