NZ_CP0264911912966..2104049

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 191084 bp
Accession: NZ_CP026491        Location: 1912966..2104049         Organism: Escherichia coli strain HS13-1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C3K24_RS09985 () 1908675..1910810 - 2136 WP_000839776.1 ornithine decarboxylase -
C3K24_RS29715 () 1910973..1911056 - 84 WP_212734243.1 hypothetical protein -
C3K24_RS09995 () 1911209..1911916 + 708 WP_000234491.1 DUF554 domain-containing protein -
C3K24_RS10005 () 1912295..1913557 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
C3K24_RS10015 () 1914009..1917524 + 3516 WP_000344091.1 ATP-binding protein -
C3K24_RS10020 () 1917633..1919132 - 1500 WP_001026222.1 phosphoethanolamine transferase -
C3K24_RS10025 () 1919307..1920053 - 747 WP_001350744.1 porin family protein -
C3K24_RS10035 () 1920413..1921423 - 1011 WP_000758687.1 cytosol aminopeptidase VF
C3K24_RS10040 () 1921467..1921967 - 501 WP_000620429.1 Nitric oxide reductase FlRd-NAD(+) reductase VF
C3K24_RS10045 () 1922042..1922563 - 522 WP_000723802.1 Iron-sulfur cluster insertion protein ErpA VF
C3K24_RS10050 () 1922590..1923126 - 537 WP_000597711.1 hypothetical protein VF
C3K24_RS10055 () 1923136..1923717 - 582 WP_000261303.1 Nitric oxide reductase FlRd-NAD(+) reductase VF
C3K24_RS10060 () 1923754..1924488 - 735 WP_000265730.1 hypothetical protein VF
C3K24_RS10065 () 1924559..1927069 - 2511 WP_000654934.1 Fe/S biogenesis protein NfuA VF
C3K24_RS10070 () 1927128..1927715 - 588 WP_001350743.1 Glyoxylate/hydroxypyruvate reductase B VF
C3K24_RS10075 () 1927778..1928326 - 549 WP_000597759.1 Pyrophosphatase PpaX VF
C3K24_RS10080 () 1928533..1928847 - 315 WP_000930062.1 hypothetical protein VF
C3K24_RS10095 () 1929279..1929512 + 234 WP_000006207.1 hypothetical protein VF
C3K24_RS10100 () 1929855..1930091 - 237 WP_000958091.1 AlpA family transcriptional regulator -
C3K24_RS10105 () 1930160..1930735 - 576 WP_000991571.1 hypothetical protein -
C3K24_RS10115 () 1932329..1932895 - 567 WP_001126806.1 inovirus-type Gp2 protein -
C3K24_RS10120 () 1933242..1934449 + 1208 Protein_1865 IS3 family transposase ISEc48 Transposase
C3K24_RS10125 () 1934484..1934849 - 366 WP_000639467.1 hypothetical protein -
C3K24_RS10130 () 1934892..1936256 - 1365 WP_000948756.1 hypothetical protein VF
C3K24_RS10135 () 1936655..1937872 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
C3K24_RS10140 () 1937869..1939878 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
C3K24_RS10145 () 1939868..1941115 + 1248 WP_001350739.1 two-component system response regulator PgtA -
C3K24_RS10150 () 1941362..1941475 + 114 Protein_1871 hypothetical protein -
C3K24_RS29495 () 1941507..1941599 + 93 Protein_1872 ATP-dependent helicase -
C3K24_RS10155 () 1941708..1942031 - 324 WP_015953064.1 hypothetical protein -
C3K24_RS10160 () 1942096..1942740 - 645 WP_001332013.1 hypothetical protein -
C3K24_RS10165 () 1942761..1943030 - 270 WP_000226516.1 PerC family transcriptional regulator -
C3K24_RS10170 () 1943109..1943754 - 646 Protein_1876 ParB N-terminal domain-containing protein -
C3K24_RS10175 () 1943739..1944971 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
C3K24_RS10180 () 1945107..1945751 - 645 WP_001013662.1 hypothetical protein -
C3K24_RS10185 () 1945945..1947393 - 1449 WP_001350737.1 AAA family ATPase -
C3K24_RS10195 () 1948779..1949991 + 1213 Protein_1881 IS256 family transposase -
C3K24_RS10200 () 1950171..1952219 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
C3K24_RS10210 () 1953001..1953741 - 741 WP_001075450.1 inovirus Gp2 family protein -
C3K24_RS29205 () 1953846..1954094 + 249 WP_000573217.1 hypothetical protein -
C3K24_RS10220 () 1955433..1956221 + 789 WP_000816188.1 hypothetical protein -
C3K24_RS10225 () 1956218..1957168 - 951 WP_000157734.1 hypothetical protein -
C3K24_RS10230 () 1957274..1958158 + 885 WP_000010416.1 50S ribosome-binding GTPase -
C3K24_RS10235 () 1958361..1959041 + 681 WP_001282927.1 WYL domain-containing protein -
C3K24_RS10240 () 1959189..1959866 + 678 WP_001097312.1 hypothetical protein -
C3K24_RS10245 () 1959872..1960105 + 234 WP_001278287.1 DUF905 family protein -
C3K24_RS10250 () 1960195..1961013 + 819 WP_001175142.1 DUF945 domain-containing protein -
C3K24_RS10255 () 1961104..1961589 + 486 WP_000860054.1 antirestriction protein -
C3K24_RS10265 () 1961604..1962080 + 477 WP_001186782.1 RadC family protein -
C3K24_RS10270 () 1962149..1962370 + 222 WP_000692312.1 DUF987 domain-containing protein -
C3K24_RS10275 () 1962449..1962826 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
C3K24_RS10280 () 1962873..1963250 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
C3K24_RS10285 () 1963247..1963735 + 489 WP_000761714.1 hypothetical protein -
C3K24_RS10290 () 1963747..1963944 + 198 WP_000839254.1 DUF957 domain-containing protein -
C3K24_RS10295 () 1964029..1964874 + 846 WP_001280513.1 DUF4942 domain-containing protein -
C3K24_RS10300 () 1964945..1966480 + 1536 WP_000492897.1 hypothetical protein VF
C3K24_RS10305 () 1966877..1967047 + 171 Protein_1901 IS110 family transposase ISEc32 Transposase
C3K24_RS10310 () 1967857..1968840 + 984 WP_001331698.1 Enolase VF
C3K24_RS10315 () 1968912..1970060 + 1149 WP_000905916.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase VF
C3K24_RS10320 () 1970084..1971760 + 1677 WP_001331697.1 hypothetical protein VF
C3K24_RS10325 () 1971770..1972510 + 741 WP_000030755.1 Phosphoglycerate kinase VF
C3K24_RS10330 () 1972507..1974534 + 2028 WP_000579525.1 D-erythrose-4-phosphate dehydrogenase VF
C3K24_RS10335 () 1974569..1975774 + 1206 WP_001161829.1 hypothetical protein VF
C3K24_RS10340 () 1975924..1977153 - 1230 WP_000575410.1 hypothetical protein VF
C3K24_RS10345 () 1977143..1978291 - 1149 WP_000197083.1 hypothetical protein VF
C3K24_RS10350 () 1978284..1979459 - 1176 WP_000723250.1 hypothetical protein VF
C3K24_RS10355 () 1979456..1980712 - 1257 WP_001259305.1 hypothetical protein VF
C3K24_RS10360 () 1980712..1981752 - 1041 WP_000066003.1 hypothetical protein VF
C3K24_RS10365 () 1981749..1982372 - 624 WP_000038461.1 ATP-dependent Clp protease proteolytic subunit VF
C3K24_RS10370 () 1982422..1983081 - 660 WP_000590258.1 Putative sporulation transcription regulator WhiA VF
C3K24_RS10375 () 1983078..1983854 - 777 WP_000124301.1 Gluconeogenesis factor VF
C3K24_RS10380 () 1984912..1985448 - 537 WP_000942829.1 RNase adapter protein RapZ VF
C3K24_RS10385 () 1985450..1986628 - 1179 WP_000097208.1 Ferredoxin--NADP reductase VF
C3K24_RS10390 () 1986625..1987602 - 978 WP_000633202.1 hypothetical protein VF
C3K24_RS10395 () 1987599..1988204 - 606 WP_001331694.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase VF
C3K24_RS10400 () 1988201..1988572 - 372 WP_000820096.1 Prolipoprotein diacylglyceryl transferase VF
C3K24_RS10405 () 1988569..1989132 - 564 WP_001115118.1 HPr kinase/phosphorylase VF
C3K24_RS10410 () 1989136..1989591 - 456 WP_001087289.1 hypothetical protein VF
C3K24_RS10415 () 1989608..1990831 - 1224 WP_001173408.1 UvrABC system protein A VF
C3K24_RS10420 () 1990831..1992324 - 1494 WP_000249340.1 UvrABC system protein B VF
C3K24_RS10425 () 1992324..1994384 - 2061 WP_001350731.1 hypothetical protein VF
C3K24_RS10430 () 1994414..1995373 - 960 WP_001350730.1 5'-deoxynucleotidase YfbR VF
C3K24_RS10435 () 1995391..1995801 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
C3K24_RS10440 () 1995867..1996676 - 810 WP_000895874.1 Protein translocase subunit SecA VF
C3K24_RS10450 () 1996840..2001402 - 4563 WP_001034562.1 hypothetical protein VF
C3K24_RS10460 () 2001886..2003568 - 1683 WP_000259302.1 glycolate permease GlcA -
C3K24_RS10465 () 2003924..2006095 - 2172 WP_000084100.1 malate synthase G -
C3K24_RS10470 () 2006117..2006521 - 405 WP_000853256.1 protein GlcG -
C3K24_RS10475 () 2006526..2007749 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
C3K24_RS10480 () 2007760..2008812 - 1053 WP_000943074.1 glycolate oxidase subunit GlcE -
C3K24_RS10485 () 2008812..2010311 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
C3K24_RS10490 () 2010562..2011326 + 765 WP_001314155.1 transcriptional regulator GlcC -
C3K24_RS10495 () 2011333..2012475 - 1143 WP_001331688.1 DNA-binding protein -
C3K24_RS10505 () 2012846..2014570 + 1725 WP_011703666.1 Peptidase T VF
C3K24_RS10510 () 2014567..2015481 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
C3K24_RS10515 () 2015513..2015761 + 249 WP_000248098.1 acyl carrier protein -
C3K24_RS10520 () 2015761..2016933 + 1173 WP_000524959.1 hypothetical protein VF
C3K24_RS10525 () 2016968..2018047 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
C3K24_RS10530 () 2018044..2019114 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
C3K24_RS10535 () 2019145..2019705 - 561 WP_001141149.1 YtfJ family protein -
C3K24_RS10540 () 2019705..2020541 - 837 WP_000984967.1 hypothetical protein -
C3K24_RS10545 () 2020541..2021890 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
C3K24_RS10550 () 2021936..2022694 - 759 WP_001445422.1 hypothetical protein -
C3K24_RS10555 () 2022726..2023439 - 714 WP_001076282.1 thymidylate kinase -
C3K24_RS10560 () 2023614..2024306 + 693 WP_001190683.1 thymidylate kinase -
C3K24_RS10565 () 2024355..2025854 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
C3K24_RS10570 () 2026146..2028005 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
C3K24_RS10575 () 2028210..2029076 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
C3K24_RS10580 () 2029209..2029457 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
C3K24_RS10585 () 2029470..2029811 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
C3K24_RS10590 () 2029804..2030292 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
C3K24_RS10595 () 2030285..2030779 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
C3K24_RS10600 () 2030779..2032482 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
C3K24_RS10605 () 2032479..2033657 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
C3K24_RS10610 () 2033647..2034633 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
C3K24_RS10615 () 2034636..2035754 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
C3K24_RS10625 () 2035943..2036230 - 288 WP_001059136.1 DUF2623 domain-containing protein -
C3K24_RS10630 () 2036349..2037236 - 888 WP_001350729.1 dienelactone hydrolase family protein -
C3K24_RS10635 () 2037393..2038433 + 1041 WP_000262189.1 L-glyceraldehyde 3-phosphate reductase -
C3K24_RS10640 () 2038473..2038967 - 495 WP_000439331.1 TIGR00645 family protein -
C3K24_RS10645 () 2039158..2040042 + 885 WP_000018758.1 hypothetical protein VF
C3K24_RS10650 () 2040081..2040506 - 426 WP_001240712.1 TonB system transport protein ExbD -
C3K24_RS10655 () 2040513..2041247 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
C3K24_RS10665 () 2041499..2042686 + 1188 WP_000763935.1 cystathionine beta-lyase -
C3K24_RS10670 () 2042826..2043485 + 660 WP_000268419.1 DedA family protein -
C3K24_RS10675 () 2043525..2044424 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
C3K24_RS10680 () 2044618..2045781 + 1164 WP_001058819.1 alcohol dehydrogenase -
C3K24_RS10685 () 2045886..2046713 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
C3K24_RS10690 () 2046913..2047839 + 927 WP_000691616.1 YbjP/YqhG family protein -
C3K24_RS10695 () 2047890..2048147 + 258 WP_000848521.1 lipoprotein YqhH -
C3K24_RS10700 () 2048189..2050408 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
C3K24_RS10705 () 2050660..2051409 + 750 WP_000438655.1 FadR family transcriptional regulator -
C3K24_RS10710 () 2051732..2053204 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
C3K24_RS10715 () 2053201..2054217 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
C3K24_RS10720 () 2054228..2055238 + 1011 WP_000214536.1 Tagatose-6-phosphate kinase VF
C3K24_RS10725 () 2055311..2056294 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
C3K24_RS10730 () 2056336..2056818 + 483 WP_001259754.1 TRAP transporter small permease -
C3K24_RS10735 () 2056829..2058133 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
C3K24_RS10740 () 2058204..2059616 - 1413 WP_000059395.1 cell division protein FtsP -
C3K24_RS10745 () 2059691..2060428 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
C3K24_RS10750 () 2060663..2062921 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
C3K24_RS10755 () 2063059..2064666 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
C3K24_RS10760 () 2064775..2065257 - 483 WP_000183493.1 GyrI-like domain-containing protein -
C3K24_RS10765 () 2065310..2065702 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
C3K24_RS10770 () 2065854..2066513 + 660 WP_001221493.1 hypothetical protein VF
C3K24_RS10775 () 2066510..2067859 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
C3K24_RS10780 () 2067905..2068237 - 333 WP_000914696.1 DUF2645 family protein -
C3K24_RS10785 () 2068244..2069436 - 1193 Protein_1992 Hcp family type VI secretion system effector -
C3K24_RS10790 () 2069686..2070267 + 582 WP_001569186.1 NADPH:quinone oxidoreductase MdaB -
C3K24_RS10795 () 2070298..2070612 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
C3K24_RS10800 () 2070657..2071544 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
C3K24_RS10805 () 2071541..2072488 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
C3K24_RS10810 () 2072499..2073536 - 1038 WP_001298372.1 Vitamin B12 import ATP-binding protein BtuD VF
C3K24_RS10815 () 2073545..2074528 - 984 WP_000986428.1 Vitamin B12 import ATP-binding protein BtuD VF
C3K24_RS10820 () 2074525..2075334 - 810 WP_000940869.1 Undecaprenyl-diphosphatase VF
C3K24_RS10825 () 2075708..2077849 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
C3K24_RS10830 () 2077913..2079805 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
C3K24_RS10835 () 2079834..2080415 - 582 WP_000105733.1 esterase YqiA -
C3K24_RS10840 () 2080415..2081242 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
C3K24_RS10845 () 2081267..2081689 - 423 WP_000833393.1 DUF1249 family protein -
C3K24_RS10850 () 2081690..2082319 - 630 WP_000917117.1 ADP-ribose diphosphatase -
C3K24_RS10855 () 2082524..2084005 + 1482 WP_000735289.1 outer membrane channel protein TolC -
C3K24_RS10865 () 2084153..2084824 + 672 WP_000831543.1 DUF1190 family protein -
C3K24_RS10870 () 2084830..2085990 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
C3K24_RS10875 () 2086475..2088271 + 1797 WP_104976656.1 aryl-sulfate sulfotransferase -
C3K24_RS10880 () 2088289..2088957 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
C3K24_RS10885 () 2088972..2089643 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
C3K24_RS10890 () 2089689..2090477 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
C3K24_RS10895 () 2090620..2091393 + 774 WP_001295627.1 zinc transporter ZupT -
C3K24_RS10900 () 2091455..2091625 - 171 WP_001296421.1 hypothetical protein -
C3K24_RS10905 () 2092195..2092758 + 564 WP_000915007.1 Thiazole synthase VF
C3K24_RS10910 () 2092845..2095367 + 2523 WP_001060674.1 hypothetical protein VF
C3K24_RS10915 () 2095383..2096123 + 741 WP_001350725.1 Thiamine-phosphate synthase VF
C3K24_RS10920 () 2096120..2097169 + 1050 WP_000631271.1 pilus protein -
C3K24_RS10925 () 2097223..2097876 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
C3K24_RS10930 () 2098250..2098549 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
C3K24_RS10935 () 2098584..2098784 - 201 WP_001296424.1 cell surface composition regulator GlgS -
C3K24_RS10945 () 2099054..2099683 + 630 WP_000599932.1 DUF1449 family protein -
C3K24_RS10950 () 2099710..2101371 + 1662 WP_001298380.1 flotillin family protein -
- () 2101569..2101710 - 142 NuclAT_0 - -
- () 2101569..2101710 - 142 NuclAT_0 - -
- () 2101569..2101710 - 142 NuclAT_0 - -
- () 2101569..2101710 - 142 NuclAT_0 - -
C3K24_RS29210 () 2101611..2101670 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
C3K24_RS10960 () 2101790..2103223 - 1434 WP_000869177.1 Adaptive-response sensory-kinase SasA VF
C3K24_RS10965 () 2103271..2106111 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
C3K24_RS10970 () 2106134..2107435 - 1302 WP_000046243.1 inorganic triphosphatase -
C3K24_RS10980 () 2107677..2108297 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance