MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60248 bp
Accession: NZ_CP026400 Location: 1..60248 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-5e72
Accession: NZ_CP026400 Location: 1..60248 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-5e72
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F40_RS27935 () | 580..1995 | - | 1416 | WP_048235105.1 | Mannose-1-phosphate guanylyltransferase 1 | VF |
| C3F40_RS27945 () | 2275..2484 | - | 210 | Protein_2 | IS6 family transposase IS26 | Transposase |
| C3F40_RS27950 () | 3487..3747 | - | 261 | WP_040080119.1 | hypothetical protein | - |
| C3F40_RS27955 () | 3858..4676 | - | 819 | WP_040080118.1 | SprT-like domain-containing protein | - |
| C3F40_RS27960 () | 4679..4912 | - | 234 | WP_044715201.1 | antirestriction protein ArdR | - |
| C3F40_RS27965 () | 5123..5392 | - | 270 | WP_044715198.1 | hypothetical protein | - |
| C3F40_RS27970 () | 5441..5896 | - | 456 | WP_044715196.1 | H-NS histone family protein | - |
| C3F40_RS27975 () | 5915..6124 | - | 210 | WP_044715194.1 | hemolysin expression modulator Hha | - |
| C3F40_RS27980 () | 6124..8445 | - | 2322 | WP_044715191.1 | type IA DNA topoisomerase | - |
| C3F40_RS27985 () | 8447..9103 | - | 657 | WP_050886235.1 | hypothetical protein | - |
| C3F40_RS27990 () | 9106..9762 | - | 657 | WP_044715189.1 | hypothetical protein | - |
| C3F40_RS27995 () | 9774..10547 | - | 774 | WP_044715185.1 | hypothetical protein | - |
| C3F40_RS28000 () | 10562..11032 | - | 471 | WP_044715183.1 | thermonuclease family protein | - |
| C3F40_RS28005 () | 11029..11364 | - | 336 | WP_050886236.1 | hypothetical protein | - |
| C3F40_RS28010 () | 11370..11573 | - | 204 | WP_044715181.1 | hypothetical protein | - |
| C3F40_RS28015 () | 11642..11851 | - | 210 | WP_015256855.1 | hypothetical protein | - |
| C3F40_RS28020 () | 11985..12380 | - | 396 | WP_044715177.1 | cag pathogenicity island Cag12 family protein | - |
| C3F40_RS28025 () | 12377..14212 | - | 1836 | WP_044715174.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C3F40_RS28030 () | 14215..14595 | - | 381 | Protein_19 | Type IV secretion system protein PtlH | VF |
| C3F40_RS28035 () | 15092..16582 | + | 1491 | WP_011787801.1 | SulP family inorganic anion transporter | - |
| C3F40_RS28040 () | 16617..17474 | + | 858 | WP_055329964.1 | universal stress protein | - |
| C3F40_RS28045 () | 17565..17897 | + | 333 | WP_011787803.1 | TraR/DksA C4-type zinc finger protein | - |
| C3F40_RS28050 () | 18015..18635 | - | 621 | WP_011787804.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| C3F40_RS28055 () | 18805..19065 | + | 261 | WP_011787805.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C3F40_RS28060 () | 19065..19376 | + | 312 | WP_011918375.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C3F40_RS28065 () | 19400..22480 | + | 3081 | WP_011787830.1 | Tn3 family transposase ISPsy42 | Transposase |
| C3F40_RS28070 () | 22534..23202 | - | 669 | Protein_27 | Type IV secretion system protein VirB11 | VF |
| C3F40_RS28075 () | 23214..24425 | - | 1212 | WP_104457608.1 | Type IV secretion system protein virB10 | VF |
| C3F40_RS28080 () | 24422..25351 | - | 930 | WP_044715170.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| C3F40_RS28085 () | 25356..26084 | - | 729 | WP_044715168.1 | Type IV secretion system protein virB8 | VF |
| C3F40_RS28090 () | 26324..27379 | - | 1056 | WP_044715165.1 | type IV secretion system protein | - |
| C3F40_RS28095 () | 27391..27648 | - | 258 | WP_044715163.1 | EexN family lipoprotein | - |
| C3F40_RS28100 () | 27658..28404 | - | 747 | WP_044715162.1 | pilus assembly protein | - |
| C3F40_RS28105 () | 28415..31174 | - | 2760 | WP_044715159.1 | Type IV secretion system protein virB4 | VF |
| C3F40_RS28110 () | 31196..31486 | - | 291 | WP_044715156.1 | TrbC/VirB2 family protein | - |
| C3F40_RS28115 () | 31470..32114 | - | 645 | WP_044715155.1 | Type IV secretion system protein virB1 | VF |
| C3F40_RS28125 () | 32338..32829 | - | 492 | WP_044715152.1 | transcription termination factor NusG | - |
| C3F40_RS28130 () | 33185..34345 | - | 1161 | WP_104457609.1 | hypothetical protein | Relaxase |
| C3F40_RS28135 () | 34348..34896 | - | 549 | WP_044715148.1 | hypothetical protein | - |
| C3F40_RS28140 () | 35224..35481 | - | 258 | WP_044715147.1 | hypothetical protein | - |
| C3F40_RS31615 () | 35497..35646 | - | 150 | WP_162852120.1 | hypothetical protein | - |
| C3F40_RS28145 () | 35724..36065 | - | 342 | WP_059347451.1 | hypothetical protein | - |
| C3F40_RS28150 () | 36162..36400 | - | 239 | Protein_43 | hypothetical protein | - |
| C3F40_RS28155 () | 36393..36659 | - | 267 | WP_044715141.1 | hypothetical protein | - |
| C3F40_RS28160 () | 36671..37213 | - | 543 | WP_044715140.1 | hypothetical protein | - |
| C3F40_RS28165 () | 37257..37772 | - | 516 | WP_044715137.1 | DnaJ domain-containing protein | - |
| C3F40_RS28170 () | 37963..38181 | + | 219 | WP_044715134.1 | hypothetical protein | - |
| C3F40_RS28175 () | 39304..40205 | + | 902 | Protein_48 | RepB family plasmid replication initiator protein | - |
| C3F40_RS28180 () | 40214..40657 | + | 444 | WP_044715130.1 | hypothetical protein | - |
| C3F40_RS28185 () | 40742..41187 | + | 446 | Protein_50 | DNA distortion polypeptide 3 | - |
| C3F40_RS28190 () | 41184..42161 | - | 978 | WP_044715124.1 | hypothetical protein | - |
| C3F40_RS28195 () | 42186..42467 | - | 282 | WP_044715122.1 | hypothetical protein | - |
| C3F40_RS28200 () | 42564..43226 | - | 663 | WP_044715119.1 | AAA family ATPase | - |
| C3F40_RS28205 () | 43563..44210 | + | 648 | WP_024262784.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C3F40_RS28215 () | 44506..45141 | + | 636 | Protein_55 | IS5 family transposase IS5D | Transposase |
| C3F40_RS28220 () | 45416..46420 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| C3F40_RS28225 () | 46755..47777 | - | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| C3F40_RS28235 () | 48160..49164 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| C3F40_RS28245 () | 49441..49794 | + | 354 | Protein_59 | IS5 family transposase IS5D | Transposase |
| C3F40_RS28255 () | 50001..51122 | - | 1122 | WP_048235111.1 | Alpha-D-kanosaminyltransferase | VF |
| C3F40_RS28260 () | 51132..52277 | - | 1146 | WP_000691216.1 | Alpha-maltose-1-phosphate synthase | VF |
| C3F40_RS28265 () | 52341..55982 | - | 3642 | WP_063078336.1 | D-inositol 3-phosphate glycosyltransferase | VF |
| C3F40_RS28270 () | 55985..57418 | - | 1434 | WP_064179390.1 | methyltransferase domain-containing protein | - |
| C3F40_RS28275 () | 57418..58632 | - | 1215 | WP_000120464.1 | Teichoic acids export ATP-binding protein TagH | VF |
| C3F40_RS28280 () | 58632..59426 | - | 795 | WP_001308747.1 | O8 family O-antigen ABC transporter permease subunit Wzm | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|