MGE detailed information
MGE type: Prophage MGE length: 54073 bp
Accession: NZ_CP026354 Location: 4488563..4542635 Organism: Escherichia coli strain 3FA Replicon: chromosome
Accession: NZ_CP026354 Location: 4488563..4542635 Organism: Escherichia coli strain 3FA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2R09_RS23140 () | 4483839..4484282 | - | 444 | WP_000786400.1 | DNA polymerase III subunit chi | - |
| C2R09_RS23145 () | 4484442..4485953 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| C2R09_RS24520 () | 4486107..4486157 | + | 51 | WP_211180521.1 | protein YtgA | - |
| C2R09_RS23150 () | 4486220..4487320 | + | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| C2R09_RS23155 () | 4487320..4488402 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| C2R09_RS23160 () | 4488563..4490065 | - | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| C2R09_RS23165 () | 4490143..4491141 | - | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| C2R09_RS23170 () | 4491208..4492527 | - | 1320 | WP_001128335.1 | gnt-II system L-idonate transporter | - |
| C2R09_RS23175 () | 4492589..4493353 | - | 765 | WP_000998695.1 | hypothetical protein | VF |
| C2R09_RS23180 () | 4493377..4494408 | - | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| C2R09_RS23185 () | 4494625..4495188 | + | 564 | WP_000896738.1 | gluconokinase | - |
| C2R09_RS23190 () | 4495192..4496211 | - | 1020 | WP_001309160.1 | NADPH-dependent aldehyde reductase Ahr | - |
| C2R09_RS23205 () | 4496677..4497942 | + | 1266 | Protein_4228 | hypothetical protein ; Integrase | Integrase |
| C2R09_RS23210 () | 4498274..4499502 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C2R09_RS23215 () | 4499595..4500775 | - | 1181 | Protein_4230 | phosphoethanolamine transferase | - |
| C2R09_RS23230 () | 4501362..4501591 | + | 230 | Protein_4231 | transposase domain-containing protein | - |
| C2R09_RS23240 () | 4502105..4503451 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| C2R09_RS23245 () | 4504060..4505277 | + | 1218 | WP_000179691.1 | MFS transporter | - |
| C2R09_RS23250 () | 4505289..4506407 | + | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C2R09_RS23255 () | 4506450..4506575 | + | 126 | WP_000594405.1 | hypothetical protein | - |
| C2R09_RS23260 () | 4506628..4506885 | - | 258 | WP_000254999.1 | hypothetical protein | - |
| C2R09_RS24275 () | 4506875..4507111 | + | 237 | Protein_4237 | MFS transporter | - |
| C2R09_RS23270 () | 4507199..4507456 | + | 258 | Protein_4238 | IS3 family transposase IS911 | Transposase |
| C2R09_RS23275 () | 4507468..4508619 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| C2R09_RS23280 () | 4508684..4508944 | - | 261 | Protein_4240 | IS3 family transposase ISSfl10 | Transposase |
| C2R09_RS23285 () | 4509011..4509795 | + | 785 | Protein_4241 | IS3 family transposase ISEc52 | Transposase |
| C2R09_RS24280 () | 4509878..4510135 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| C2R09_RS23295 () | 4510692..4511459 | - | 768 | WP_000175457.1 | hypothetical protein | VF |
| C2R09_RS23300 () | 4511460..4512416 | - | 957 | WP_000684852.1 | hypothetical protein | VF |
| C2R09_RS23305 () | 4512413..4513411 | - | 999 | WP_000125187.1 | hypothetical protein | VF |
| C2R09_RS23310 () | 4513408..4514310 | - | 903 | WP_000879155.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| C2R09_RS23315 () | 4514355..4516679 | - | 2325 | WP_000188283.1 | Fe(3+) dicitrate transport protein FecA | - |
| C2R09_RS23320 () | 4516766..4517719 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| C2R09_RS23325 () | 4517716..4518237 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| C2R09_RS24525 () | 4518374..4518442 | + | 69 | WP_211180522.1 | protein YkiE | - |
| C2R09_RS23335 () | 4518529..4519226 | + | 698 | Protein_4251 | IS1 family transposase | - |
| C2R09_RS23340 () | 4519340..4520326 | - | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| C2R09_RS23350 () | 4520673..4522022 | - | 1350 | WP_001128363.1 | GntP family permease | - |
| C2R09_RS23355 () | 4522129..4524096 | - | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| C2R09_RS23360 () | 4524107..4525012 | - | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| C2R09_RS23365 () | 4525017..4525805 | - | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| C2R09_RS23370 () | 4526108..4526890 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| C2R09_RS23375 () | 4526907..4527539 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| C2R09_RS23380 () | 4527551..4527982 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| C2R09_RS23385 () | 4528113..4528919 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| C2R09_RS23390 () | 4528932..4530245 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| C2R09_RS23395 () | 4530257..4530535 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| C2R09_RS23400 () | 4530532..4531653 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| C2R09_RS24380 () | 4531898..4532014 | - | 117 | Protein_4264 | VOC family protein | - |
| C2R09_RS23405 () | 4532052..4532270 | - | 219 | Protein_4265 | hypothetical protein | - |
| C2R09_RS23410 () | 4532439..4533185 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| C2R09_RS23415 () | 4533241..4533786 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| C2R09_RS23420 () | 4533798..4534055 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| C2R09_RS23430 () | 4534432..4534677 | - | 246 | Protein_4269 | GNAT family N-acetyltransferase | - |
| C2R09_RS23440 () | 4534793..4536033 | + | 1241 | Protein_4270 | helicase YjhR | - |
| C2R09_RS23445 () | 4536616..4537596 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C2R09_RS23450 () | 4537661..4538767 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| C2R09_RS23455 () | 4538787..4539503 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C2R09_RS23470 () | 4540959..4541561 | + | 603 | WP_000790583.1 | hypothetical protein | VF |
| C2R09_RS23475 () | 4542039..4542635 | + | 597 | WP_000044711.1 | hypothetical protein | VF |
| C2R09_RS23485 () | 4543117..4543665 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| C2R09_RS23490 () | 4543730..4544269 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| C2R09_RS23495 () | 4544306..4545031 | + | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|