MGE detailed information
MGE type: Prophage MGE length: 33914 bp
Accession: NZ_CP026351 Location: 263108..297021 Organism: Escherichia coli strain 5A Replicon: chromosome
Accession: NZ_CP026351 Location: 263108..297021 Organism: Escherichia coli strain 5A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2R12_RS01265 () | 258677..259006 | + | 330 | Protein_238 | sigma factor-binding protein Crl | - |
| C2R12_RS01270 () | 259045..260100 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| C2R12_RS01275 () | 260388..261491 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C2R12_RS01280 () | 261503..262756 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C2R12_RS01290 () | 263328..263669 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| C2R12_RS01295 () | 263690..264007 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| C2R12_RS01300 () | 264026..264247 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| C2R12_RS01305 () | 264256..264732 | - | 477 | WP_000811693.1 | RadC family protein | - |
| C2R12_RS01310 () | 264748..265206 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| C2R12_RS01315 () | 265304..265543 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| C2R12_RS01320 () | 265620..266087 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| C2R12_RS01325 () | 266110..266553 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| C2R12_RS01330 () | 266553..266780 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| C2R12_RS01335 () | 266776..266967 | - | 192 | Protein_251 | DeoR family transcriptional regulator | - |
| C2R12_RS01340 () | 267184..268005 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| C2R12_RS01345 () | 268097..268960 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| C2R12_RS01350 () | 269289..270182 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| C2R12_RS01360 () | 270278..270535 | + | 258 | Protein_255 | IS3 family transposase ISEc52 | Transposase |
| C2R12_RS01365 () | 270603..271754 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| C2R12_RS01370 () | 271764..272189 | + | 426 | Protein_257 | IS3 family transposase | - |
| C2R12_RS01380 () | 272862..273953 | + | 1092 | Protein_258 | group II intron reverse transcriptase/maturase | - |
| C2R12_RS01390 () | 274101..275081 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| C2R12_RS01395 () | 275325..276728 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| C2R12_RS01400 () | 276715..277647 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| C2R12_RS01405 () | 277756..278802 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C2R12_RS01410 () | 278814..279161 | - | 348 | Protein_263 | ABC transporter permease subunit | - |
| C2R12_RS01415 () | 279178..279875 | - | 698 | Protein_264 | IS1 family transposase IS1R | Transposase |
| C2R12_RS01425 () | 279931..280104 | + | 174 | Protein_265 | IS30 family transposase | - |
| C2R12_RS01430 () | 280114..280362 | - | 249 | Protein_266 | IS3 family transposase ISEhe3 | Transposase |
| C2R12_RS01435 () | 280385..280735 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| C2R12_RS01440 () | 280829..281983 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| C2R12_RS01445 () | 282278..283186 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| C2R12_RS01450 () | 283201..285168 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| C2R12_RS01455 () | 285395..286777 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| C2R12_RS01460 () | 286789..288399 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| C2R12_RS01465 () | 288404..289162 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| C2R12_RS01470 () | 289301..290305 | - | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase, catabolic | VF |
| C2R12_RS24395 () | 290275..290370 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| C2R12_RS01475 () | 290429..290632 | + | 204 | Protein_276 | DUF3987 domain-containing protein | - |
| C2R12_RS01485 () | 290649..291346 | - | 698 | Protein_277 | IS1 family transposase IS1R | Transposase |
| C2R12_RS01495 () | 291401..292231 | + | 831 | Protein_278 | type III restriction endonuclease subunit R | - |
| C2R12_RS01500 () | 292322..292948 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| C2R12_RS01505 () | 293220..293918 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| C2R12_RS01510 () | 293945..294799 | - | 855 | WP_000072039.1 | hypothetical protein | - |
| C2R12_RS01515 () | 294918..295142 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| C2R12_RS01520 () | 295139..295579 | - | 441 | WP_000224818.1 | hypothetical protein | - |
| C2R12_RS01525 () | 295696..297096 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C2R12_RS01535 () | 297381..297719 | - | 339 | Protein_285 | LysR family transcriptional regulator | - |
| C2R12_RS01540 () | 297770..298726 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C2R12_RS01545 () | 298736..300934 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| C2R12_RS01550 () | 300931..301887 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|